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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF189237; SV 1; linear; mRNA; STD; INV; 1360 BP.
XX
AC   AF189237;
XX
DT   02-OCT-2000 (Rel. 65, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Dictyostelium discoideum homogentisate 1,2-dioxygenase (HGO) mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Dictyostelium discoideum
OC   Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-1360
RA   Schmidt S.R.;
RT   "Identification of HGO homologs in different organisms";
RL   Unpublished.
XX
RN   [2]
RP   1-1360
RA   Schmidt S.R.;
RT   ;
RL   Submitted (23-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, GPC-AG, Lochhamer Str. 29, Martinsried D-82152, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Dictyostelium discoideum"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:44689"
FT   CDS             <1..1297
FT                   /codon_start=2
FT                   /gene="HGO"
FT                   /product="homogentisate 1,2-dioxygenase"
FT                   /EC_number="1.13.11.5"
FT                   /note="2,5-dihydroxyphenylacetate oxidase"
FT                   /db_xref="GOA:Q54QI4"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q54QI4"
FT                   /protein_id="AAG17115.1"
FT                   /translation="TRPQIDYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQL
FT                   SGNAFTAPRHTQQRSWLYRIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITE
FT                   DKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDI
FT                   QTEFGFMKVKSGEICVIQRGITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGANGLANP
FT                   RDFLSPVAAYEKKEGIEHTKINKFLGKLFSATQTYSPFNVVAWHGNYCPYKYDLSLFCV
FT                   VNSVSFDHLDPSIFTVLTAPTNEVGVAAADFVIFPPRWLVQENTFRPPYFHRNCMSEFM
FT                   GLIRGVYEAKKEGFLPGGGSLHSCMTPHGPDSDTFYAAIKAELKPTKIPDVALAFMFES
FT                   SLILGISDYAKKNFIDDDYWKCWQGLKDNSKI"
XX
SQ   Sequence 1360 BP; 458 A; 219 C; 239 G; 444 T; 0 other;
     cacgcgtccg caaatagatt atgaatatca aagtggattt ggtaattcct ttgaaagtga        60
     agcaattaaa ggaacattac caaagggaag aaatgcacca caaaattgtc cactcgattt       120
     atatgctgaa caactctctg gtaatgcttt cacagcacca agacataccc aacaaagatc       180
     atggttatat cgtattagac catcagtttg tcatacacca cttaaaccaa ttgattcagg       240
     attagtttgt gatttaaata atttacatgt tgatccaaat caattaagat ggaaaccatt       300
     cccaattaca gaagataaac cacacgattt cgttgagggt ctcattacaa tcgctggtgc       360
     tggtcatgca tcagtacgtc atggtcttgc aattcatatt tatacagcaa caaagagtat       420
     ggaaaataaa tccttttata actctgatgg tgatttctta attgtaccac aacaaggtac       480
     attagatatt caaacagaat ttggatttat gaaagttaaa tcaggtgaga tttgtgtaat       540
     tcaaagaggt attacattta gtgttaatgt tgaaggacca actagaggtt atatttgtga       600
     ggtgtttgga tcacatttta aacttccaga tttaggacca attggtgcta atggtttagc       660
     aaatccaaga gatttcttat caccagttgc agcctatgaa aagaaggaag gtattgaaca       720
     tacaaagatt aataaattcc ttggaaagtt atttagtgca acacaaacct actcaccatt       780
     caatgttgta gcatggcatg gtaactattg tccatacaag tatgatctca gtttattctg       840
     tgtagttaat tcggtttcat ttgatcattt ggatccatcg attttcacag ttttaacagc       900
     accaaccaat gaggtgggtg ttgctgctgc tgatttcgta attttcccac cacgttggtt       960
     ggttcaagag aatacattta gaccaccata ctttcatcgt aattgtatgt ctgaatttat      1020
     gggtttaatc cgtggtgtct atgaagcaaa gaaagagggt ttcttaccag gtggtggtag      1080
     tttacacagt tgtatgactc cacatggtcc tgactctgat accttttatg ccgccattaa      1140
     agctgaatta aaaccaacta aaattccaga tgtagcttta gctttcatgt ttgaatcctc      1200
     tcttatttta ggtatctctg attatgctaa aaagaatttt attgatgatg attattggaa      1260
     atgttggcaa ggtttaaagg ataattctaa aatttaaatt aaaaaaaaaa aaaacatttt      1320
     aaaattatct tttttaaaaa aaaaatacat atataaaaaa                            1360
//
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