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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF188727; SV 1; linear; genomic DNA; STD; PRO; 1653 BP.
XX
AC   AF188727;
XX
DT   04-NOV-1999 (Rel. 61, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Salmonella enterica isolate Pullorum UDP-sugar hydrolase (ushA) gene,
DE   complete cds.
XX
KW   .
XX
OS   Salmonella enterica
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella.
XX
RN   [1]
RP   1-1653
RX   PUBMED; 11429465.
RA   Innes D., Beacham I.R., Beven C.A., Douglas M., Laird M.W., Joly J.C.,
RA   Burns D.M.;
RT   "The cryptic ushA gene (ushA(c)) in natural isolates of Salmonella enterica
RT   (serotype Typhimurium) has been inactivated by a single missense mutation";
RL   Microbiology (Reading, Engl.) 147(Pt 7):1887-1896(2001).
XX
RN   [2]
RP   1-1653
RA   Innes D., Beven C.-A., Douglas M.L., Laird M.W., Joly J.C., Burns D.M.,
RA   Beacham I.R.;
RT   ;
RL   Submitted (22-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL   School of Health Science, Griffith University, PMB 50 Gold Coast Mail
RL   Centre, Gold Coast, Qld 4217, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1653
FT                   /organism="Salmonella enterica"
FT                   /isolate="Pullorum"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:28901"
FT   CDS             1..1653
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ushA"
FT                   /product="UDP-sugar hydrolase"
FT                   /note="5'-nucleotidase"
FT                   /db_xref="GOA:Q9RN37"
FT                   /db_xref="InterPro:IPR004843"
FT                   /db_xref="InterPro:IPR006146"
FT                   /db_xref="InterPro:IPR006179"
FT                   /db_xref="InterPro:IPR008334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9RN37"
FT                   /protein_id="AAF05581.1"
FT                   /translation="MKFLKRGVALALLAAFALTTQPAQAYEKDKTYKITILHTNDHHGH
FT                   FWRSEYGEYGLAAQKTLVDSIRKEVAQEGGGVLLLSGGDINTGVPESDLQDAEPDFRGM
FT                   NLIGYDAMAVGNHEFDNPLTVLRQQEKWAKFPFLSANIYQKSTGERLFKPWAIFTRQDI
FT                   KIAVIGLTTDDTAKIGNPEYFTDIEFRKPAEEAKVVIQELNMNEKPDVIIATTHMGHYD
FT                   NGDHGSNAPGDVEMARSLPAGSLAMIVGGHSQDPVCMASENKKQVNYVPGTPCAPDKQN
FT                   GIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWDNGKSERVLYTPEIA
FT                   ENPQMLLLLTPFQNKGKVQLEVKIGSVNGLLEGDRSKVRFVQTNMGRVILAAQIARTGA
FT                   DFGVMSGGGIRDSIEAGDITYKSVLKVQPFGNIVVYADMSGKEVVDYLTRVAQMKPDSG
FT                   AYPQLANVSFVAKEGKLTDLKIKGEPVDPAKTYRMATLSFNATGGDGYPRIDNKPGYVN
FT                   TGFIDAEVLKEFIQQNSPLDAAAFTPKGEVSWL"
XX
SQ   Sequence 1653 BP; 439 A; 377 C; 480 G; 357 T; 0 other;
     atgaaatttt tgaaacgggg tgtggcgctg gcgttactgg cggcgttcgc gctgacgact        60
     cagcctgcac aggcttacga aaaagataaa acctataaaa ttactatcct gcataccaac       120
     gatcaccacg gtcacttctg gcgcagcgaa tatggcgaat atggtctggc ggcgcaaaaa       180
     acgctggtgg acagtatccg taaagaggtg gcgcaagagg ggggaggcgt cctgttgtta       240
     tccggcggcg acattaatac cggggtgccg gaatccgatc tccaggatgc ggagcccgat       300
     ttccgcggga tgaatctgat tggctacgac gctatggccg tcggtaatca tgaatttgat       360
     aacccgctca ccgtattgcg ccagcaggaa aagtgggcga agtttccctt tctttccgcc       420
     aatatttatc aaaaaagtac cggcgagcgt ctgtttaagc cgtgggctat ttttacacgc       480
     caggatataa aaatcgcggt aatcggctta accaccgatg acacggcgaa aataggcaac       540
     ccggaatatt tcaccgatat tgagtttcgt aaacctgctg aagaagcaaa ggtggtgatt       600
     caggaactta atatgaatga aaaaccggac gtgattatcg cgaccacaca tatggggcat       660
     tatgacaacg gcgatcacgg ttcgaacgcg ccgggcgacg ttgagatggc gcgtagcctg       720
     cctgccggtt cgctggcgat gattgtgggc ggtcactcac aagacccggt atgcatggcg       780
     tcggaaaata aaaaacaggt gaattacgta ccgggaacgc cctgcgcgcc ggataagcaa       840
     aatggtatct ggatagtgca ggcgcatgag tggggtaaat atgtgggccg cgcggatttc       900
     gaattccgta acggcgagat gaaaatggtt aactaccagc ttattccggt aaatctcaag       960
     aaaaaagtga cctgggataa cgggaaaagc gagcgtgtac tttacacgcc ggaaatcgcc      1020
     gaaaatccgc aaatgctctt gttattaacg ccgttccaga ataaaggtaa agtgcaactg      1080
     gaggtgaaaa ttggtagcgt gaatggcctt cttgaaggcg atcgcagtaa ggtcagattt      1140
     gtccagacca atatgggacg ggtgattctg gctgcgcaga tcgcgcgcac cggcgccgat      1200
     tttggcgtga tgagcggcgg cggtattcgc gactcgattg aggcgggaga tattacctat      1260
     aaaagcgtgc tcaaggtaca gccgttcggc aacattgtgg tgtatgccga tatgagcggc      1320
     aaagaagtgg ttgattatct cacccgcgta gcacagatga aaccggactc cggcgcctat      1380
     ccacagctcg ccaatgtgag ctttgtcgcc aaagagggca agctcaccga tctgaaaatc      1440
     aaaggcgagc ctgttgatcc ggctaaaacc tatcgcatgg cgacgctgag tttcaacgcc      1500
     acgggcggcg atggttatcc gcgcattgat aacaaaccgg gctacgtgaa taccgggttt      1560
     attgacgcgg aagtgctgaa agagtttatt cagcaaaatt caccgctgga tgcggcggcg      1620
     tttacgccaa aaggcgaggt gagctggctg tag                                   1653
//
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