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EBI DbfetchID AF182427; SV 1; linear; genomic DNA; STD; PRO; 4172 BP. XX AC AF182427; XX DT 06-OCT-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Bordetella bronchiseptica prephenate dehydratase (pheA) gene, partial cds; DE prephenate dehydrogenase (tyrA), 5-enolpyruvylshikimate-3-phosphate DE synthase (aroA), and cytidine monophosphate kinase (cmk) genes, complete DE cds; and ribosomal protein S1 (rpsA) gene, partial cds. XX KW . XX OS Bordetella bronchiseptica OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [1] RP 1-4172 RX DOI; 10.1016/S0378-1097(03)00162-9 RX PUBMED; 12694904. RA McArthur J.D., West N.P., Cole J.N., Jungnitz H., Guzman C.A., Chin J., RA Lehrbach P.R., Djordjevic S.P., Walker M.J.; RT "An aromatic amino acid auxotrophic mutant of Bordetella bronchiseptica is RT attenuated and immunogenic in a mouse model of infection"; RL FEMS Microbiol. Lett. 221(1):7-16(2003). XX RN [2] RP 1-4172 RA McArthur J.D., Walker M.J.; RT "Bordetella bronchiseptica aroA"; RL Unpublished. XX RN [3] RP 1-4172 RA McArthur J.D., Walker M.J.; RT ; RL Submitted (02-SEP-1999) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, University of Wollongong, Northfields Av, Wollongong, RL NSW 2522, Australia XX FH Key Location/Qualifiers FH FT source 1..4172 FT /organism="Bordetella bronchiseptica" FT /strain="240/2" FT /mol_type="genomic DNA" FT /db_xref="taxon:518" FT CDS <1..315 FT /codon_start=1 FT /transl_table=11 FT /gene="pheA" FT /product="prephenate dehydratase" FT /EC_number="4.2.1.51" FT /EC_number="5.4.99.5" FT /note="chorismate mutase" FT /db_xref="GOA:Q9RND9" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR018528" FT /db_xref="UniProtKB/TrEMBL:Q9RND9" FT /protein_id="AAF01288.1" FT /translation="DPQNRTRFLAVGHIEPLSSGKDKTSLILAVPNRAGAVYDMLAPMA FT ANGVSMTRFESRPARTGQWEYYFYVDVLGHRDDANVARALAALQAQVAFFKVLGSYPAQ FT " FT CDS 402..1301 FT /codon_start=1 FT /transl_table=11 FT /gene="tyrA" FT /product="prephenate dehydrogenase" FT /EC_number="1.3.1.12" FT /EC_number="5.4.99.5" FT /note="chorismate mutase" FT /db_xref="GOA:Q9RND8" FT /db_xref="InterPro:IPR003099" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9RND8" FT /protein_id="AAF01289.1" FT /translation="MSANNSANGQGPLVPVLAVAGVGLIGGSFAAALRHAGQVGTILGV FT GRNPASLARARELGLIDEAVSPEEAAARADLVLLSTPVGGLGAMLARMRDHLRPGCLLT FT DAGSTKSQVVMAARQALGEQVSCFVPGHPIAGGERTGPEAADAGLYVRRAVVLTPLPEN FT AAASVARVRACWHACGAHVVEMDDVAHDRLLASVSHMPHFLAAVYMAQVAGSDDAQARM FT DLAGSGFRDFTRIAAGSPEMWRDIFLSNQAAMQSELAALRRVLDEAEQALGAGDGAGLQ FT ALLERAAHARRNWRKDSK" FT CDS 1298..2626 FT /codon_start=1 FT /transl_table=11 FT /gene="aroA" FT /product="5-enolpyruvylshikimate-3-phosphate synthase" FT /EC_number="2.5.1.19" FT /db_xref="GOA:Q9RND7" FT /db_xref="InterPro:IPR001986" FT /db_xref="InterPro:IPR006264" FT /db_xref="InterPro:IPR013792" FT /db_xref="InterPro:IPR016228" FT /db_xref="UniProtKB/Swiss-Prot:Q9RND7" FT /protein_id="AAF01290.1" FT /translation="MSGLAYLDLPAARLARGEVALPGSKSISNRVLLLAALAEGSTEIT FT GLLDSDDTRVMLAALRQLGVSVGEVADGRVTIEGVARFPTEQAELFLGNAGTAFRPLTA FT ALALMGGDYRLSGVPRMHERPIGDLVDALRQFGAGIEYLGQAGYPPLRIGGGSIRVDGP FT VRVEGSVSSQFLTALLMAAPVLARRSGQDITIEVVGELISKPYIEITLNLMARFGVSVR FT RDGWRAFTIARDAAYRGPGRMAIEGDASTASYFLALGAIGGGPVRVTGVGEDSIQGDVA FT FAATLAAMGADVRYGPGWIETRGVRVAEGGRLKAFDADFNLIPDAAMTAATLALYADGP FT CRLRNIGSWRVKETDRIHAMHTELEKLGAGVQSGADWLEVAPPAPGGWRDAHIGTWDDH FT RMAMCFSLAAFGPAAVRILDPGCVSKTFPDYFDVYAGLLAARD" FT CDS 2641..3312 FT /codon_start=1 FT /transl_table=11 FT /gene="cmk" FT /product="cytidine monophosphate kinase" FT /db_xref="GOA:Q9RND6" FT /db_xref="InterPro:IPR003136" FT /db_xref="InterPro:IPR011994" FT /db_xref="UniProtKB/Swiss-Prot:Q9RND6" FT /protein_id="AAF01291.1" FT /translation="MAISASAGAAPVITIDGPTASGKGTIAHRVAKQLGWDVLDSGALY FT RLTALAALRRGLPATDEPAVAAVAQALDVRFDGPHVYLEGRDAGHEIRQEEVGNYASRI FT AAYPGVRQALLERQRAFRQPPGLVADGRDMGTVVFPDASLKIFLVADVEARAQRRCKQL FT IEKGISANLDDLLRDMRERDARDTQRAVAPLAPAADAHVLDSSGLTIEQTVQAVLDFWR FT A" FT CDS 3483..>4172 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsA" FT /product="ribosomal protein S1" FT /db_xref="GOA:Q9RND5" FT /db_xref="InterPro:IPR000110" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q9RND5" FT /protein_id="AAF01292.1" FT /translation="MDSNLMSSVSTSAIVGGENFADLFAESLKSQDMKSGEVISAEVVR FT VDHNFVVVNAGLKSEALIPLEEFLNDQGELEVQPGDFVSVAIDSLENGYGDTILSRDRA FT KRLSAWLQLEQALENGELVTGTITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYE FT GKTLEFKVIKLDRKRNNVVLSRRQVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGA FT FVDLGGID" XX SQ Sequence 4172 BP; 633 A; 1381 C; 1476 G; 682 T; 0 other; gatccgcaga accgcacgcg cttcctggct gtcggccata tcgagccatt gagcagcggc 60 aaggacaaga ccagcctgat cctggccgtg cccaaccgcg ccggcgccgt ctatgacatg 120 ctggcgccga tggcggccaa cggcgtttcc atgacgcgct tcgaatcgcg cccggcgcgc 180 acgggccagt gggaatacta tttctacgtc gacgtgctgg gccatcgcga tgacgcgaac 240 gtggcccgcg cactggcggc attgcaggcg caggtggcct tcttcaaggt gctgggttcg 300 tatccggcgc aatagggcca cggcgtggtt gacgcacacc aggcggccgc cgtgacggag 360 cgtgtgtccg tccggcgctg ccatattgtt tttctgcagg tatgagcgcg aacaattcgg 420 caaacgggca ggggcccctg gtccccgtgc tggctgtggc cggcgtaggc ttgatcggtg 480 gctcgttcgc cgccgcgttg cgccacgccg ggcaggtcgg caccattctc ggcgtgggcc 540 gcaacccggc ctcgctggcg cgtgcgcgcg agctgggcct gatcgacgag gccgtctcgc 600 ccgaggaagc ggcggcgcgc gcagacctgg tgctgctgtc caccccggtg ggcgggctgg 660 gcgcgatgct ggcgcgcatg cgcgaccatc tgcggccggg ctgcctgctg accgatgccg 720 gcagcaccaa atcgcaggtc gtcatggcgg cgcgccaggc gctgggcgag caggtttcct 780 gtttcgtgcc ggggcatccg atcgccggag gcgagcgcac cgggcccgag gcggccgacg 840 cggggctgta cgtacggcgt gcggtagtgc ttacgcccct gccggagaac gcggccgcat 900 cggtggcgcg cgtgcgcgcc tgctggcacg catgcggggc gcacgtggtc gagatggacg 960 acgtggcgca cgaccggctg ctggcttcgg tcagccacat gccgcacttc ctggccgccg 1020 tctacatggc ccaggtggcc ggctccgatg acgcccaggc gcgcatggat ctggccggta 1080 gcggttttcg ggatttcacg cgcatcgcgg ccggttcgcc ggaaatgtgg cgcgatatct 1140 ttttgtccaa ccaggccgcc atgcagtccg agctggcggc cctgcgacgg gtgctcgacg 1200 aggccgagca ggcattgggc gccggcgacg gcgcgggcct gcaggccttg ctggagcgcg 1260 cggcgcacgc gcggcgcaat tggcgcaagg attccaaatg agcggattgg catatctcga 1320 cctgcccgcg gcgcgcctgg cgcgcggcga ggtggccctg ccgggttcca agagcatctc 1380 caacagggta ttgctgctgg ccgcgctggc cgaaggcagc accgaaatca cgggcctgct 1440 cgattccgat gacacccgcg tcatgctggc cgcgttgcgc cagctgggcg tatcggtggg 1500 cgaggtggcc gatggccgcg tgaccatcga aggcgtggcg cgctttccga ccgaacaggc 1560 cgagctgttc ctaggcaacg ccggcaccgc gttccggccg ctgaccgcgg cgctggcgtt 1620 gatgggcggc gattaccgcc tgtccggcgt gccgcgcatg cacgagcggc ccatcggcga 1680 cctggtcgac gccttgcgcc agttcggcgc cgggatcgaa tatctggggc aggcggggta 1740 tccgccgctg cgcatcggcg gcggcagcat tcgcgtcgac gggccggtgc gggtggaggg 1800 ctcggtgtcc agccagttcc tgaccgcctt gctgatggcc gcccccgtgc tggctcggcg 1860 cagcggccag gacatcacca tcgaggtggt gggcgagctg atttccaaac cctatatcga 1920 gatcacgctc aatctgatgg cgcgttttgg cgtgtcggtg cggcgcgacg gctggcgcgc 1980 cttcacgatc gcgcgcgatg cggcctaccg cggcccgggc cgcatggcga tcgagggcga 2040 tgcctcgacg gcgtcgtact tcctggccct gggcgccatc ggcggcgggc cggtgcgcgt 2100 caccggcgtg ggcgaggaca gcatccaggg cgacgtggcg ttcgccgcga cgctggcggc 2160 gatgggcgcc gacgtgcgct atggcccggg ctggatcgag acgcgcggcg tgcgggtggc 2220 cgagggcgga cgcctgaagg cgttcgacgc tgacttcaac ctgattcccg acgccgccat 2280 gacggccgcg acgctggcgc tgtacgccga cggcccatgc cgcctgcgca acatcggcag 2340 ctggcgcgtc aaggagaccg accgcatcca cgccatgcac accgagctgg agaagctggg 2400 ggcgggcgtg caaagcgggg cggactggct ggaggtggcg ccgccggcgc ccggcggctg 2460 gcgcgacgcc cacatcggca cctgggacga ccaccgcatg gccatgtgct tctcgctggc 2520 cgcgttcggt ccggctgcgg tgcgcatcct ggatccgggt tgcgtcagca agactttccc 2580 cgattatttc gacgtgtacg cgggcctgct ggccgcgcgg gactgaacgg cgcctgcccc 2640 atggctattt ccgcatccgc cggcgccgcg ccggtcatca ccatcgacgg ccccacggct 2700 tccggcaagg gcaccatcgc gcaccgggtg gccaagcagc tgggctggga cgtgctcgac 2760 agcggcgccc tgtaccggct gaccgccctg gccgcgttgc ggcgcggcct gccggccacc 2820 gacgaaccgg cggtggccgc cgtggcccag gcgctggacg tacggttcga cgggccgcat 2880 gtctacctgg aagggcggga tgccgggcac gaaatccgcc aggaagaggt cggaaactac 2940 gcttcgcgca tcgccgccta cccgggcgtt cgtcaggcct tgctggagcg ccagcgggct 3000 ttccggcagc cgccgggcct ggtcgccgac ggccgcgaca tggggacggt cgtgtttcct 3060 gatgcgtccc tgaaaatatt tctggtggcc gatgtcgagg cgcgcgcgca aagacgctgt 3120 aagcagttga tcgaaaaggg aatttctgct aatctagatg acctgctacg cgatatgcgt 3180 gaacgcgatg cgcgcgacac gcagcgtgcg gtggcaccgc ttgccccggc tgccgatgcg 3240 catgtgctgg attcttccgg cctgaccatc gaacagaccg tacaggccgt gctggatttc 3300 tggcgcgcct agccacggcg cgtgttgttt gggcagtacc tcagtacctg tttgaggccc 3360 tgacggccaa tctccagccc ccacgggaca ccccgcaagg gccggcgaag ccggcaggtt 3420 ttaccactcc actgctgcgg gcaatccgtt gcggtgtgtt ttgaacggcc aatcccggcc 3480 aaatggattc caacctaatg tcttccgttt ccacctccgc catcgttggc ggcgaaaact 3540 tcgccgacct gttcgcagaa agcctcaaga gccaggacat gaagtccggc gaggtcatca 3600 gtgccgaagt cgtgcgcgtc gatcacaatt tcgtggtcgt caacgccggc ctgaagtccg 3660 aagcgctgat tcccctggaa gagttcctca atgaccaggg cgaactcgaa gttcaacccg 3720 gcgacttcgt ctcggtggcg atcgattcgc tggagaacgg ctacggcgac accatcctgt 3780 cgcgcgaccg cgccaagcgt ctgtcggcct ggctgcaact ggagcaggcc ctcgagaacg 3840 gcgagctggt caccggcacg atcaccggca aggtcaaggg cggcctgacc gtcatgacca 3900 acggcatccg cgcgttcctg cccggttcgc tggtcgacct gcgcccggtc aaggacacca 3960 cgccgtacga aggcaagacc ctcgaattca aggtcatcaa gctggaccgc aagcgcaaca 4020 acgtcgtgct gtcgcgccgc caggtgctgg aagccagcat gggcgaagag cgccagaagc 4080 tgctcgagac gctgcacgaa ggcgcggtgg tcaagggcgt ggtcaagaac atcaccgact 4140 acggcgcgtt cgtcgacctg ggcggcatcg at 4172 // |
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