EBI Dbfetch

ID   AF181680; SV 2; linear; mRNA; STD; VRT; 1500 BP.
XX
AC   AF181680;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   03-MAR-2000 (Rel. 62, Last updated, Version 4)
XX
DE   Gallus gallus retinaldehyde dehydrogenase 2 (Raldh2) mRNA, complete cds.
XX
KW   .
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-50
RX   DOI; 10.1073/pnas.96.20.11376
RX   PUBMED; 10500184.
RA   Tsukui T., Capdevila J., Tamura K., Ruiz-Lozano P., Rodriguez-Esteban C.,
RA   Yonei-Tamura S., Magallon J., Chandraratna R.A.S., Chien K., Blumberg B.,
RA   Evans R.M., Izpisua Belmonte J.C.;
RT   "Multiple left-right asymmetry defects in Shh(-/-) mutant mice unveil a
RT   convergence of the shh and retinoic acid pathways in the control of
RT   Lefty-1";
RL   Proc. Natl. Acad. Sci. U.S.A. 96(20):11376-11381(1999).
XX
RN   [2]
RP   1-50
RA   Tsukui T., Capdevila J., Tamura K., Ruiz-Lozano P., Rodriguez-Esteban C.,
RA   Yonei-Tamura S., Magallon J., Chandraratna R.A.S., Chien K., Blumberg B.,
RA   Evans R.M., Izpisua Belmonte J.C.;
RT   ;
RL   Submitted (29-AUG-1999) to the EMBL/GenBank/DDBJ databases.
RL   GEL-B, Salk Institute, 10010 North Torrey Pines Road, La Jolla, CA
RL   92037-1099, USA
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1500
RA   Capdevila J.;
RT   ;
RL   Submitted (08-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL   GEL-B, Salk Institute, 10010 North Torrey Pines Road, La Jolla, CA
RL   92037-1099, USA
XX
CC   On Oct 8, 1999 this sequence version replaced gi:6003524.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1500
FT                   /organism="Gallus gallus"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9031"
FT   CDS             1..1500
FT                   /codon_start=1
FT                   /gene="Raldh2"
FT                   /product="retinaldehyde dehydrogenase 2"
FT                   /db_xref="GOA:O93344"
FT                   /db_xref="HSSP:1BI9"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="UniProtKB/Swiss-Prot:O93344"
FT                   /protein_id="AAF00485.2"
FT                   /translation="MASLHLLPSPTLNLEIKHTKIFINNEWQNSESGRVFPVYNPATGE
FT                   QICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATM
FT                   ESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQ
FT                   IIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPG
FT                   FGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADAD
FT                   LDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQ
FT                   GPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEI
FT                   FGPVQEILRFKTVDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNAL
FT                   NAQSPFGGFKMSGNGREMGESGLREYSEVKTVTIKIPQKNS"
XX
SQ   Sequence 1500 BP; 459 A; 290 C; 382 G; 369 T; 0 other;
     atggcatctc tgcatctgct gccttctccc actctcaacc ttgaaatcaa acacacgaag        60
     atttttatca ataatgagtg gcaaaattct gaaagcggga gagtattccc agtatacaat       120
     ccagcaacag gagagcagat ctgtgagatc caggaagcag acaaggttga cacggacaag       180
     gcagtgagag cagctcgcct tgctttttct ctgggttcag tttggaggag aatggatgca       240
     tcggaaagag gccaactttt ggataaactg gcagacttgg ttgaaagaga cagggcagtt       300
     cttgctacta tggaatcact gaacagtggc aaaccattcc tgcaagcctt ctacgtagat       360
     cttcaaggag tcataaaaac cctgaggtat tacgctggtt gggcagacaa aatccatgga       420
     atgaccatac ctgtagatgg agattatttt acgtttacaa gacatgaacc catcggagtg       480
     tgtggacaga tcatcccttg gaacttcccc ctgctgatgt ttgcatggaa gattgctcca       540
     gctctgtgct gcggcaatac agtagttatt aaaccagcag aacaaacacc actcagcgct       600
     ctctatatgg gagccctcat caaggaggct ggctttccac caggagttgt gaatattttg       660
     ccaggatttg gtccaattgt tggtgcagca atagcatctc atgtgggcat tgataaaatt       720
     gcgtttactg gatccactga ggttgggaag ctgatccaag aagcagctgg aaggagtaac       780
     ttgaagagag ttacactgga gctgggtggg aaaagcccaa acatcatttt tgcagatgct       840
     gatttggatt atgctgtgga acaagctcac cagggggtct tcttcaatca aggtcaatgc       900
     tgcactgcag gctcaaggat ttacgtggaa gaatcaatct atgaagagtt tgttagaaga       960
     agtgtagaac gtgcaaagag gagagtagta gggagtcctt ttgacccaac tacagaacaa      1020
     gggccacaga ttgataaaaa acaatacaac aagatcttgg aactgattca gagcggcatt      1080
     actgaaggag caaaacttga atgtgggggt aaagggctag gaagaaaggg cttcttcatt      1140
     gaacctacag tgttttccaa tgtaacagat gacatgcgga ttgccaagga ggagattttt      1200
     gggcctgttc aagaaatact gagatttaaa accgtggatg aagtcataga gagagccaac      1260
     aattctgact ttgggctggt agctgctgtc tttacaaatg acataaacaa ggccctgaca      1320
     gtctcttcag caatgcaggc tgggacagtc tggataaatt gctacaacgc cttaaatgcc      1380
     cagagtcctt ttggaggatt caaaatgtct ggcaatggta gagagatggg tgaaagcgga      1440
     ttgagagaat attctgaagt taaaacagtg acaataaaga tccctcagaa gaattcctaa      1500
//