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EBI Dbfetch

ID   AF157602; SV 2; linear; mRNA; STD; VRL; 1701 BP.
XX
AC   AF157602;
XX
DT   11-JAN-2000 (Rel. 62, Created)
DT   17-AUG-2000 (Rel. 64, Last updated, Version 2)
XX
DE   Kaposi's sarcoma-associated herpesvirus interferon regulatory factor 3
DE   (vIRF-3) mRNA, complete cds.
XX
KW   .
XX
OS   Human herpesvirus 8
OC   Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae;
OC   Gammaherpesvirinae; Rhadinovirus.
XX
RN   [1]
RP   1-1701
RX   DOI; 10.1128/JVI.74.17.8194-8201.2000
RX   PUBMED; 10933732.
RA   Lubyova B., Pitha P.M.;
RT   "Characterization of a novel human herpesvirus 8-encoded protein, vIRF-3,
RT   that shows homology to viral and cellular interferon regulatory factors";
RL   J. Virol. 74(17):8194-8201(2000).
XX
RN   [2]
RP   1-1701
RA   Lubyova B., Pitha P.M.;
RT   ;
RL   Submitted (09-JUN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Oncology Center, Johns Hopkins University, 418 N. Bond St., Baltimore, MD
RL   21231, USA
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1701
RA   Lubyova B., Pitha P.M.;
RT   ;
RL   Submitted (18-FEB-2000) to the EMBL/GenBank/DDBJ databases.
RL   Oncology Center, Johns Hopkins University, 418 N. Bond St., Baltimore, MD
RL   21231, USA
XX
CC   On Aug 16, 2000 this sequence version replaced gi:6684503.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1701
FT                   /organism="Human herpesvirus 8"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:37296"
FT   CDS             1..1701
FT                   /codon_start=1
FT                   /gene="vIRF-3"
FT                   /product="interferon regulatory factor 3"
FT                   /db_xref="GOA:Q9DUN1"
FT                   /db_xref="InterPro:IPR008984"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DUN1"
FT                   /protein_id="AAF23608.2"
FT                   /translation="MAGRRLTWISEFIVGALDSDKYPLVKWLDRSTGTFLAPAARNDVI
FT                   PLDSLQFFIDFKRECLSKGLHPRDLLGSPITAFGKICTTSRRLRRLPGEEYEVVQGINC
FT                   RRWRLLCAEVKECWWCVHARTHLHSGSSLWEILYQHSVRLEKHRRRPRPFVGENSDSSE
FT                   EDHPAFCDVPVTQTGAESEDSGDEGPSTRHSASGVQPVDDANADSPGSGDEGPSTRHSD
FT                   SQPPPADETTVHTDNVEDDLTLLDKESACALMYHVGQEMDMLMRAMCDEDLFDLLGIPE
FT                   DVIATSQPGGDTDASGVVTEGSIAASAVGAGVEDVYLAGALEAQNVAGEYVLEISDEEV
FT                   DDGAGLPPASRRRPVVGEFLWDDGPRRHERPTTRRIRHRKLRSAYYRVARPPVMITDRL
FT                   GVEVFYFGRPAMSLEVERKVFILCSQNPLADISHSCLHSRKGLRVLLPKPDDNNTGPGD
FT                   VNLLAAVLRSFASGLVIVSLRSGIYVKNLCKSTVLYHGNNPPKKFGVICGLSSRAVLDV
FT                   FNVAQYRIQGHEHIKKTTVFIGGDPTSAEQFDMVPLVIKLRLRSVTCDD"
XX
SQ   Sequence 1701 BP; 408 A; 386 C; 492 G; 415 T; 0 other;
     atggcgggac gcaggcttac ctggatttct gagtttattg taggtgcttt ggactctgat        60
     aaatatcctt tggtcaagtg gctagataga tctactggaa catttcttgc tccggctgcc       120
     cgtaatgacg taattcctct ggatagccta cagtttttca ttgattttaa gagggaatgc       180
     ctatcgaagg gcctgcatcc cagagattta ctgggctcgc cgattacggc ttttgggaaa       240
     atatgtacca cgtcgcggcg ccttagacgc ttgccaggtg aagagtacga ggtcgtacag       300
     ggaattaatt gtagaaggtg gcgcctcctg tgtgccgagg taaaggaatg ctggtggtgc       360
     gttcatgcca ggactcacct acacagtggg tcatcactat gggaaatttt gtatcaacac       420
     agtgtacggc tcgagaagca tcggagaaga ccaaggccat ttgtgggtga aaactcggat       480
     tccagtgagg aggatcaccc agccttttgc gatgtgccgg tcacgcagac gggcgcggaa       540
     tctgaggact ctggagacga gggaccatcg acgcgccata gtgcgtctgg ggttcagcca       600
     gttgatgatg ccaatgccga ctctcctggc tctggagacg aaggaccctc gacgcgtcat       660
     agcgactcgc agcccccccc ggccgatgaa acaacggtgc acacagacaa cgttgaagat       720
     gacctcacac tgcttgataa agaatctgca tgtgcattga tgtaccacgt gggacaggag       780
     atggacatgc taatgagggc gatgtgcgat gaagacctct ttgatctgct tggcatccca       840
     gaggatgtta tcgcaacatc acagcccgga ggcgacacgg atgcaagcgg cgtggtaaca       900
     gagggctcaa tcgccgcctc ggctgtcggg gcgggtgtag aggatgtgta cttagctggg       960
     gcactcgagg cccagaatgt agcaggggaa tatgtgttgg agataagtga cgaagaagtc      1020
     gatgatggtg ctggactgcc gccggcgtcc agacgccggc cagttgttgg cgaattttta      1080
     tgggatgatg ggccacggag acacgagagg cctaccacga ggcgcattcg ccacaggaag      1140
     cttagatccg catattatag agtggcacgg ccgccagtaa tgataaccga taggcttggt      1200
     gtggaagtgt tttattttgg ccgccctgca atgtctttgg aagtggaacg aaaggtgttt      1260
     attctatgtt cccagaaccc actggcagac attagccact cttgcttgca ttcgcgcaaa      1320
     gggttaagag ttttgttgcc caaacctgac gacaataaca cagggccagg agacgttaac      1380
     ctgctggcgg ccgtgctgcg ctcgtttgct tcgggtcttg tgatagtttc tctccgatct      1440
     ggcatttatg ttaagaattt gtgcaagtct accgtattat atcatggaaa taatcctcca      1500
     aagaagtttg gtgtgatctg cggactgtca tctagggctg ttctggatgt ttttaatgtg      1560
     gcacaatatc gcatacaggg acatgagcac attaaaaaaa caactgtgtt catcggaggt      1620
     gacccaacgt cggcagaaca gttcgatatg gtccccctcg tcatcaagct cagattgcgt      1680
     tcagttacat gtgatgacta a                                                1701
//


  
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