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EBI DbfetchID AF155197; SV 1; linear; genomic DNA; STD; PRO; 6555 BP. XX AC AF155197; XX DT 09-NOV-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Acetivibrio cellulolyticus cellulosomal scaffoldin precursor (cipV) gene, DE complete cds. XX KW . XX OS Acetivibrio cellulolyticus OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Acetivibrio. XX RN [1] RP 1-6555 RX PUBMED; 10542174. RA Ding S.Y., Bayer E.A., Steiner D., Shoham Y., Lamed R.; RT "A novel cellulosomal scaffoldin from Acetivibrio cellulolyticus that RT contains a family 9 glycosyl hydrolase"; RL J. Bacteriol. 181(21):6720-6729(1999). XX RN [2] RP 1-6555 RA Ding S.-Y., Bayer E.A., Steiner D., Shoham Y., Lamed R.; RT ; RL Submitted (30-MAY-1999) to the EMBL/GenBank/DDBJ databases. RL Department of Biological Chemistry, The Weizmann Institute of Science, RL Rehovot 76100, Israel XX FH Key Location/Qualifiers FH FT source 1..6555 FT /organism="Acetivibrio cellulolyticus" FT /mol_type="genomic DNA" FT /db_xref="taxon:35830" FT sig_peptide 772..858 FT /gene="cipV" FT CDS 772..6519 FT /codon_start=1 FT /transl_table=11 FT /gene="cipV" FT /product="cellulosomal scaffoldin precursor" FT /function="family-9 glycoside hydrolase" FT /function="cellulose binding: family-III CBD" FT /function="subunit binding: type-I cohesin-dockerin FT interaction" FT /function="cell anchoring: type-II cohesin-dockerin FT interaction" FT /db_xref="GOA:Q9RPL0" FT /db_xref="HSSP:1IA6" FT /db_xref="InterPro:IPR018452" FT /db_xref="UniProtKB/TrEMBL:Q9RPL0" FT /protein_id="AAF06064.1" FT /translation="MKKVISMIVAIAMLVTMFSTVVNLGTASAATQDYDKALDYAIQFF FT DANKCGPDAASDNVFSWRGACHTSDKGPSGEDLTGGYHDAGDHVKFGLPQAYSAFMLGW FT ALYEYGNVMDSTGNKTKILSTLKYFSDYLLKCHPSANIFYHQVGEGGPDHSYWGAPEKQ FT TGTRSTKVVDSNTAGTDVAGEASAALAIMYLNYKDIDATYANKCLAASKTLLALAKSKI FT GAYNESEFYKSYCIYDDLAWASIWLYIAGGSTDSTLLADAEKYSVMDKLNGESPLKHVW FT TMCWDDVYLPAFIKLAQMTGKATYKDALAYSFNYWKSTVTTTPGGLKWLNNWGALRYAS FT GEAALAFMYNNLVAKDATLVSTYKAQIDYALGTNPSNYSYVIGYGSTWPKSPHHRAANP FT DKSSNAKYTLTGALVGGPSNSDSYVDDVNQYQYSEVAIDYNSSFVLALASYLGTTMTST FT TTPTKTATAPTPTKTTSTGTGFTVNVDSVNGNVGEQIVVPVSFANVPSNGVSTADMTIT FT YDSSKLEYVSGAAGSIVTNPTVNFGINKEADGKLKVLFLDYTMSTGYISTNGVFANVTF FT KVLNSAPTTVGITGATFGDKNLGNISATINAGSINGGTISTPTKTTAVTPTKTTTIVPT FT PTKTTSTGTGFTVNVDSVNGNVGEQIVVPVSFANVPSNGISTADMTITYDSSKLEYVSG FT DAGSIVTNPTVNFGINKETDGKLKVLFLDYTMSTGYISTNGVFAKVTFKVLNAGGSSVG FT ITGATFGDKNLGSVSATINAGSINGGSIPTPTKTTAVTPTKTTGVTPTKTPVIGTGFTV FT SVDSVNGNVGEQIVIPVSFANIPANGISTADMTITYDSSKLEYVSGVPGSIVTNPDVNF FT GINKETDGKLKVLFLDYTMSTGYISTSGVFTKVTFKVLSSGGSTVGITGATFGDKNLGN FT VSATINAGSINGGSISTPTKTPIVTPTKTATVPTPGKTAVSSNLKVEFFNAGTQAQSNS FT IYPKFRLTNTGSNAINLADVKLHYYFTVDGDKAQTFWCDWSPVGSSNVTGTFVKMNPTT FT TGADQYLEIAFSSAAGTLAANTSIEVQGRFAKSDWTNYNQADDYSFNSSATTYTSWDKV FT TAYSAEGLIWGIEPNGTVVTPTTVVTPTKTATATPTKTATATPTKTSTPNPNAMAVAVG FT AVQGGVGETVTVPVTMTKVPTTGVSTADFTVTYDATKLEYVSGAAGSIVTNPDVNFGIN FT KEADGKIKVLFLDYTMATEYISKDGVFANLTFKIKSTAAAGTTAAVGIAGTATFGDSAL FT KPITAVITDGKVEIIDGKAMKVVIANVSGNAGSEVVVPVSIEGVSANGVSAADFTITYD FT ATKLDYVSGAAGSIVKNPDVNFGINKEADGKLKVLFLDYTMATEYISADGIFANLTFKI FT KSTAVNGDVAAISKSGTATFGDKNLGPISAVIKDGSVTVGNVTPTKTATATPTVTPTKT FT STATATPTGTQTGFNLSIDTVEGNPGSSVVVPVKLSGISKNGISTADFTVTYDATKLEY FT ISGDAGSIVTNPGVNFGINKESDGKLKVLFLDYTMSTGYISTDGVFANLNFNIKSSAAI FT GSKAEVSISGTPTFGDSTLTPVVAKVTNGAVNVVKKDDPNAFKVSIDTVKAATGTQVVV FT PVSFVNVPATGISTTDMTITYDATKLQYVSGDAGSIVTNPGVNFGINKEADGKLKVLFL FT DYTMTTQYISEDGVFANVTFKVIGTDGLAAVNAEDATFGDSSLSPVTASVVNGGVNIGI FT VSEGTTVSGYINPDFVTTSTTAPIVKAGFTVEIVGTTKSAVTDSNGYFEIKDVAAGTYT FT VKITKANYLTREIANVSVTADKELSTSASPILMWAGDMAIGGTQDGAINLEDILEICKA FT FNTSSTDAKYQVGLDLNRDGAISLEDVMIVAKHFNKVSSDY" FT mat_peptide 859..6516 FT /gene="cipV" FT /product="cellulosomal scaffoldin" XX SQ Sequence 6555 BP; 2340 A; 1101 C; 1259 G; 1855 T; 0 other; aagctttttg tgaatttgtt aaattttaac cccccaaaat ttcgagttat ttcgtattac 60 tattatagaa taattaatag gaaaggttga acagtcgaac ttagttagat taaaaaaatg 120 attttactct ttggcaaagt agttcttgaa agattaaaag ttttaatata taataaagtt 180 aagctcataa taaaaaatta tttaaatata tataagtaga tgtattaggg agtaaagagg 240 tcacaataat cctaacaacc ttactaattc aagtccaatt ctattccaga tgaggtttaa 300 tttcttttta acttcttcct ctaaataccc taatacagca aaagttaaaa tattattatt 360 ttataatata taatacatat aagtttattt aaggaggaat ttgtgaggaa aaagaataac 420 tggtctgttt tattttcaga gaattttaaa ttgtttagaa tggattatac tagagaaata 480 atttgtagtt tatttattaa tctcgctgta gcatttatta ttatcgtaca tattccgtaa 540 tgttgttgta atgttttcaa tatccttcta ccaaaatatt tttcttacta cttcaaatct 600 attctatttt atcccaagtg ttctctggta acatatttgt ttcgtacaag ttttacttat 660 taacatgaga gacaataact aacatgtata ttaggtattt gttttttttg ggtaccttaa 720 agatctttaa atagatcata taaaaataaa atttttggga ggaatggtta aatgaaaaag 780 gttatcagta tgattgtagc tatcgctatg cttgttacca tgttttcaac agtagttaac 840 cttggaacag catctgcggc aacacaagat tacgacaaag cgcttgatta cgcaattcaa 900 ttttttgacg ctaacaagtg cggtccagac gcagcaagtg acaatgtgtt cagttggaga 960 ggcgcgtgcc acacttctga caaaggtcct agtggagaag atctcacagg cggttaccat 1020 gacgcaggtg accatgtgaa atttggttta cctcaggcat actcagcatt tatgctggga 1080 tgggcattat atgaatacgg aaatgttatg gatagcacag gaaataaaac taaaatttta 1140 tccactttga agtatttttc agattattta ttaaaatgcc atccaagtgc aaacattttc 1200 tatcatcagg taggagaggg tggaccagac cacagctatt ggggagcacc agaaaaacag 1260 acaggtacaa gatcaactaa agttgttgat tcaaatacag ctggaactga tgtagctggt 1320 gaagcttcag cagcacttgc tattatgtac cttaattaca aggatattga cgctacatat 1380 gcaaacaaat gtttagcagc ttctaagaca cttttagctt tagcaaaatc taagataggt 1440 gcttacaatg aatcagaatt ttataaatca tattgtatat atgatgacct tgcatgggca 1500 tcaatatggt tatatatagc tggtggtagc acagattcta cattattagc tgatgctgaa 1560 aagtattctg taatggataa gcttaatgga gaatctcctt tgaagcatgt atggactatg 1620 tgttgggatg atgtttatct tcctgctttc attaaattag ctcagatgac aggtaaagca 1680 acatataaag atgctttagc atattctttt aattactgga agagtactgt taccacaact 1740 ccaggcggtt tgaagtggtt gaacaactgg ggagcattga gatacgcttc tggtgaagca 1800 gctcttgcat ttatgtacaa caatcttgtt gcgaaggatg caactttagt atctacttat 1860 aaagctcaga tagactatgc tcttggaaca aatccttcaa attattcata tgttattggt 1920 tatggttcta catggccaaa gagtccacac cacagagcag ctaatccaga caagtcatct 1980 aatgctaaat atacattaac aggtgcattg gttggaggac ctagcaacag tgattcttat 2040 gttgatgatg ttaatcaata ccaatattca gaagtagcta ttgattataa ttcaagtttt 2100 gtacttgctt tggcaagtta ccttggcaca acaatgacta gcacaacaac accaacaaag 2160 actgcaacag cgccaacacc aacaaagaca acatcaactg gtactggatt cacagttaat 2220 gttgattcag ttaatggtaa tgttggagag caaatagtag tacctgtaag ctttgcaaat 2280 gttccttcaa acggagtaag cacagcagac atgacaatca cttatgactc aagcaagctc 2340 gaatatgtaa gtggagcagc tggaagcata gttacaaatc ctactgtaaa ctttggaata 2400 aacaaagaag cagatggcaa attaaaagta ttattccttg actatacaat gtcaactgga 2460 tatatcagca caaacggagt attcgcaaat gttacattta aagtgttaaa tagtgcacct 2520 acaactgttg gtataactgg tgcaacattt ggagacaaga atcttggtaa catatctgca 2580 acaataaatg caggatcaat aaatggtgga acaatatcaa caccaactaa gacaactgca 2640 gtaacaccta ctaagacaac tactatagta ccaacaccaa caaagacaac atcaactggc 2700 actggattca cagttaatgt tgattcagtt aatggtaatg ttggagagca aatagtagta 2760 cctgtaagct ttgcaaatgt tccttcaaac ggaataagca cagcagacat gacaatcact 2820 tatgattcaa gcaagctcga atatgtaagt ggagatgctg gaagcatagt tacaaatcct 2880 actgtaaact ttggaataaa caaagaaaca gatggcaaat tgaaagtatt attccttgac 2940 tatacaatgt caactggata tatcagcaca aacggagtat ttgcaaaagt tacatttaaa 3000 gtattaaatg caggtggttc atctgttggc ataactggtg caacatttgg agacaagaat 3060 cttggtagcg tatctgcaac aataaatgca ggatcaataa atggtggatc aataccaaca 3120 ccaactaaga caactgctgt aacaccaact aagacaactg gtgtaacacc tacaaagaca 3180 ccagtaattg gtactggatt cacagttagt gttgattcag ttaatggtaa tgttggagag 3240 caaatagtaa tacctgtaag ctttgcaaat attcctgcaa acggaataag cacagcagac 3300 atgacaatca cttatgattc aagcaagctc gaatatgtaa gtggagtacc tggaagcata 3360 gttacaaatc ctgatgtgaa ctttggaata aacaaagaaa cagatggcaa attgaaagta 3420 ttattccttg actatacaat gtcaactgga tatatcagca caagcggagt attcacaaaa 3480 gttacattta aagtattaag ctcaggcggt tcaactgttg gcataactgg tgcaacattt 3540 ggagacaaga atcttggtaa cgtatctgca acaataaatg caggatcaat aaatggtggt 3600 tcaatatcaa caccaactaa gacacctata gtaacaccta ctaagacagc tacagtacca 3660 acaccaggta agactgctgt atcttcaaac ttgaaagttg agttcttcaa tgcaggtaca 3720 caggctcaaa gtaatagtat ttatcctaag ttcagactta caaacacagg tagtaatgca 3780 atcaatcttg cagacgtaaa attacattat tactttacag ttgatggaga taaagcacag 3840 acattctggt gtgactggtc tccagtaggc agctccaacg taactggaac atttgtaaaa 3900 atgaacccaa caactactgg cgcagatcag tatcttgaaa tcgcattcag tagtgcagct 3960 ggtactcttg cagctaatac ttcaatagaa gttcagggta gatttgctaa gagcgactgg 4020 acaaattaca atcaagcaga tgactactca tttaactcaa gtgcaacaac ttatacatca 4080 tgggataaag taactgcata ttcagcagag ggcttgatct ggggtataga acctaatggt 4140 actgtagtaa cacctacaac agtagtaaca cctacaaaaa cagcaacagc aacaccaaca 4200 aaaacagcaa cagcaacacc aacaaaaaca tcaacaccaa atcctaatgc tatggcagta 4260 gcagttggag cagttcaagg tggagttggt gaaacagtaa cagttcctgt tacaatgact 4320 aaagttccta caacaggagt tagtacagct gatttcacag ttacttatga tgcaactaag 4380 cttgaatacg taagtggagc agctggaagt atagtaacaa atcctgatgt aaactttgga 4440 ataaacaaag aagcagatgg taaaataaaa gtattgttcc ttgactatac aatggctact 4500 gaatatatca gtaaagatgg agtatttgca aacttgacat tcaagattaa atcaactgca 4560 gcagctggta caacagcagc agtaggcata gctggaacag caacatttgg tgatagtgca 4620 ttaaaaccaa taacagcagt tataacagat ggtaaagtag agatcataga tggaaaagct 4680 atgaaagtag ttatagctaa tgtaagtggt aatgctggtt cagaagtagt agtacctgtt 4740 tcaatagaag gagtatctgc taacggtgtt agtgcagctg attttacaat cacttatgat 4800 gcaactaagc ttgattatgt aagtggagca gctggaagca tagttaaaaa tcctgatgta 4860 aactttggaa taaacaaaga agcagacgga aaattgaaag tattattcct tgactacaca 4920 atggctactg aatacatcag tgcagacggc atattcgcaa acttgacatt caagatcaag 4980 tcaactgcag ttaatggtga tgtagcagca atcagtaagt caggtacagc aacatttgga 5040 gataaaaact taggtcctat aagtgcagtt attaaagatg gttctgttac agtaggaaac 5100 gtaacgccta ctaagactgc aactgcaaca cctacagtga cacctactaa gacttcgact 5160 gcaactgcaa caccaactgg tacacaaact ggtttcaatc tttcaataga tactgtagaa 5220 ggtaacccag gttcatctgt tgtagtacct gttaaacttt caggcataag caaaaatgga 5280 attagcacag ctgatttcac agttacttat gatgcaacta agctcgaata tatcagtgga 5340 gatgctggaa gcatagttac aaaccctggt gtaaactttg gaataaataa agaatcagac 5400 ggtaaattaa aagtattgtt ccttgattac acaatgtcaa caggttatat cagtacagat 5460 ggagtatttg ctaatcttaa cttcaacatc aaatcaagtg cagcaatagg ttcaaaagca 5520 gaagtaagta taagcggaac acctacattt ggtgatagta cattaactcc agtagtagca 5580 aaagttacaa atggagcagt taatgtagtt aagaaagatg atccaaatgc ttttaaagta 5640 tcaattgata cagtaaaagc ggcaactggt acacaagtag tggtacctgt atcatttgta 5700 aatgtacctg caacaggaat cagtacaact gatatgacaa tcacttatga cgcaactaag 5760 cttcagtacg taagtggaga tgctggaagc atagttacaa atcctggcgt aaactttgga 5820 ataaacaaag aagcagatgg caaattgaaa gtattgttcc ttgactatac aatgactact 5880 cagtatatta gcgaggatgg agtatttgca aacgtgacat ttaaagttat tggtactgat 5940 ggattagcag cagtaaatgc agaagatgca acatttggtg atagctcatt atctcctgta 6000 actgcttcag ttgtaaacgg tggagttaat attggtatag tatctgaagg aactacagtt 6060 tcaggctata ttaaccctga ctttgtaact acttctacta cagctccaat agtaaaagca 6120 ggatttacag tagaaatagt tggaacaact aagtcagctg taacagatag taatggatac 6180 ttcgaaataa aagatgtagc agctggaaca tatactgtaa agattactaa agctaattat 6240 ctcactagag aaatagctaa cgtttcagta actgcagata aagaattatc aacatcagct 6300 tcacctatac tcatgtgggc aggtgacatg gcaataggcg gtacacaaga tggcgcaatc 6360 aacttggaag acatattgga aatctgtaaa gcattcaaca cttcatctac tgatgctaag 6420 tatcaagtag gtctagactt gaatagagat ggcgcaataa gcttggaaga tgtaatgata 6480 gttgctaaac acttcaataa agtatcttca gactattaaa aactggttaa cacatacata 6540 tatgaggaag ggtcc 6555 // |
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