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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF135967; SV 1; linear; mRNA; STD; MAM; 1215 BP.
XX
AC   AF135967;
XX
DT   20-APR-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Canis familiaris caspase-1-like protein mRNA, complete cds.
XX
KW   .
XX
OS   Canis lupus familiaris (dog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
XX
RN   [1]
RP   1-1215
RX   PUBMED; 10826695.
RA   Taylor S., Hanlon L., McGillivray C., Gault E.A., Argyle D.J., Onions D.E.,
RA   Nicolson L.;
RT   "Cloning and sequencing of feline and canine ice-related cDNAs encoding
RT   hybrid caspase-1/caspase-13-like propeptides";
RL   DNA Seq. 10(6):387-394(2000).
XX
RN   [2]
RP   1-1215
RA   Taylor S., Hanlon L., McGillivray C., Gault E.A., Argyle D.J., Onions D.E.,
RA   Nicolson L.;
RT   ;
RL   Submitted (18-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Veterinary Pathology, Glasgow Veterinary School, Bearsden Road, Glasgow G61
RL   1QH, Scotland, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1215
FT                   /organism="Canis lupus familiaris"
FT                   /mol_type="mRNA"
FT                   /cell_type="PBMC; alveolar macrophages"
FT                   /db_xref="taxon:9615"
FT   misc_feature    1..22
FT                   /note="primer-derived sequence"
FT   CDS             1..1215
FT                   /codon_start=1
FT                   /product="caspase-1-like protein"
FT                   /note="member of caspase family; interleukin-1beta
FT                   converting enzyme; ICE"
FT                   /db_xref="GOA:Q9MZV7"
FT                   /db_xref="HSSP:1ICE"
FT                   /db_xref="InterPro:IPR015917"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9MZV7"
FT                   /protein_id="AAF64388.1"
FT                   /translation="MADKVLKDKRRLFVRSVDMGTINGLLDELFEKRVLNHEEMERVRC
FT                   AHSTVMDQARVLIDSVLRKGPNACQIFISNICNEDIHLAQTLGLSSGSPSGNDHTKLDS
FT                   QVEVPSLPAFVENMPGPTIPDSEESTDTLKLCPPETFVKMYKEKAEEIYPIKERKDRTR
FT                   LALIICNIEFDHLSTRDGAELDIAGMESLLEGLGYSVVVKRKLTAKGMESVLREFAARP
FT                   EHKSSDSTFLVLMSHGILNGICGTAHSVENPDVLAYDTIFQIFNNRHCLNLKDKPKVII
FT                   IQACRGENPGELWVSDSPKASTDSWTHQPLMLQSDAIHKVHVEKDFIAFCSSTPHNVSW
FT                   RHITKGSLFIAQLITCFQKYSWCCHLEGVFRKVQQSFEKPDVKAQMPTIERVSMTRYFY
FT                   LFPGH"
FT   misc_feature    1198..1215
FT                   /note="primer-derived sequence"
XX
SQ   Sequence 1215 BP; 348 A; 290 C; 283 G; 294 T; 0 other;
     atggccgaca aggtcctgaa ggacaagaga aggctgtttg tccggtcagt agacatgggg        60
     accatcaatg gtttgctgga tgaactcttt gagaaaagag tgctgaacca cgaggagatg       120
     gagcgagtgc ggtgtgcaca ctctacagtt atggatcagg cccgagttct gattgactcc       180
     gtccttcgga aagggccaaa tgcatgccag atttttattt ctaatatttg caatgaggac       240
     attcacctgg cacagacgct ggggctctcc tcaggttcac catctggaaa tgatcatacc       300
     aaactagact ctcaagtaga agttccttct ttaccagcct tcgtggaaaa catgcctggg       360
     ccaaccattc ctgactcaga agaatctaca gatactctca agctttgtcc tcctgaaaca       420
     tttgtgaaaa tgtataaaga gaaggctgaa gagatctacc caataaagga gagaaaggat       480
     cgtactcgtc tggctctcat catatgcaat atagagtttg atcatctttc taccagggat       540
     ggagctgaac ttgacattgc aggaatggag agtctgctgg agggcctggg ctacagtgta       600
     gttgtgaaac ggaaactcac tgctaagggt atggaatcag tgctacggga atttgctgcc       660
     cgcccagagc ataagtcctc agacagcaca ttcttggtgt taatgtctca cggcatcctg       720
     aatggaatct gtgggaccgc acacagcgtg gaaaatccag atgtactagc ttatgacacc       780
     atcttccaga ttttcaacaa ccgtcactgc ctcaacctca aggacaaacc gaaggtcatc       840
     atcatccagg cctgcagagg tgaaaatcct ggggaactgt gggtcagcga ctctccaaaa       900
     gcctcgacag acagctggac acatcaacct ctgatgctcc agagtgatgc cattcacaag       960
     gtccacgtgg agaaggactt cattgctttc tgctcctcaa ccccacataa tgtgtcctgg      1020
     agacatatca cgaagggatc tcttttcatt gcacaactca tcacatgctt ccaaaaatat      1080
     tcctggtgct gtcacctaga aggagtattc cggaaggtac aacaatcatt tgaaaaacca      1140
     gatgtgaaag cccagatgcc gaccattgaa cgagtatcca tgacaagata tttctatctc      1200
     ttcccaggac attaa                                                       1215
//
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