EBI Dbfetch

ID   AF135153; SV 1; linear; genomic DNA; STD; PLN; 1205 BP.
XX
AC   AF135153;
XX
DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabis parishii country USA class I chitinase gene, partial cds.
XX
KW   .
XX
OS   Boechera parishii
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Boechera.
XX
RN   [1]
RP   1-1205
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
XX
RN   [2]
RP   1-1205
RA   Bishop J.G., Mitchell-Olds T., Dean A.M.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Plank Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1205
FT                   /organism="Boechera parishii"
FT                   /mol_type="genomic DNA"
FT                   /country="USA: San Bernadino Mts, San Bernadino Cty, CA,
FT                   USA"
FT                   /db_xref="taxon:81979"
FT   mRNA            join(<1..396,662..>1205)
FT                   /product="class I chitinase"
FT   CDS             join(<1..396,662..>1205)
FT                   /codon_start=3
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7F4"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7F4"
FT                   /protein_id="AAF69793.1"
FT                   /translation="SLLLSLASAEQCGRQAGGAPCPNGLCRSEFGWCGDTEPYCKQPGC
FT                   QSQCTPGGTPPGPTPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFP
FT                   GFGTTGDTATRKKEIAAFFGQTSHETTGGWASAPDGPFSWGYCFKQEQNPTSNYCEPSA
FT                   TWPCAPGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT
FT                   AQPPKPSCHAVIAGQWQPSDADSAAGRLPGYGVITNIINGGLECGRGQDERVANRIGFY
FT                   QRYCNIFGVNPGDNLDCYNQRSFGNGLLGAA"
FT   intron          397..661
XX
SQ   Sequence 1205 BP; 313 A; 287 C; 280 G; 325 T; 0 other;
     tctcacttct tttatcactt gcatcagccg agcaatgtgg tcgtcaagcc ggaggagcac        60
     cctgtcccaa cggtctatgt cgcagcgagt ttggatggtg cggtgacacc gaaccatact       120
     gtaagcagcc tggctgccaa agccagtgca ctcccggcgg tactcctccg ggacccacgc       180
     ccaccggaga tctttcgggc atcatttcaa gttctcagtt cgatgatatg cttaagcata       240
     ggaatgatgc tgcgtgtcct gctagaggtt tctacactta caacgccttt atcaccgctg       300
     caaagtcctt ccccggtttt ggcaccaccg gagacaccgc cacaaggaag aaggagatcg       360
     ccgccttctt cggccagact tcccatgaaa ccacaggtac tcattaacaa ttaagctttg       420
     gttatttcaa acgtaattta tagttttgac atttataata atagttaatg aaacaaagtt       480
     tgaataactt caaatatata gattttccac attatggtta tttcaaactt ctataccgta       540
     tatccttttt tttttttatt tgggtaaaaa aaactcattc taaaactgta atcaattatt       600
     gttagatgtt aatgtaaagt tgtgactata tattaatgaa ccggatggtt atattatcca       660
     ggtgggtggg cttcagcacc ggacggacca ttttcatggg gctactgttt caagcaagaa       720
     cagaatccaa cttcaaacta ctgtgaacca agcgccacgt ggccatgcgc acctggcaaa       780
     cgctactacg gaagaggacc aatgcagctg tcgtggaact acaattacgg tctatgcggt       840
     agagccatag gagttgactt actcaacaac cctgacctcg tagccaacga cgcagtgatc       900
     gctttcaaag ccgcgatttg gttctggatg actgctcagc ctcccaaacc gtcgtgccac       960
     gccgtgatcg ctgggcagtg gcagccgtca gacgccgaca gtgccgccgg gagattaccg      1020
     ggttacggtg tgattacgaa catcattaac ggtggattgg agtgcggacg tggtcaagac      1080
     gagagagtcg cgaatcgtat agggttttat cagaggtatt gtaacatatt tggggttaat      1140
     cctggtgata atcttgattg ttacaaccaa aggtcctttg gtaacggcct cctcggcgct      1200
     gctat                                                                  1205
//