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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF135141; SV 1; linear; genomic DNA; STD; PLN; 1134 BP.
XX
AC   AF135141;
XX
DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabis gunnisoniana class I chitinase gene, partial cds.
XX
KW   .
XX
OS   Boechera gunnisoniana
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Boechera.
XX
RN   [1]
RP   1-1134
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
XX
RN   [2]
RP   1-1134
RA   Bishop J.G., Mitchell-Olds T., Dean A.M.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Plank Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1134
FT                   /organism="Boechera gunnisoniana"
FT                   /mol_type="genomic DNA"
FT                   /country="USA: Gunnison County, CO"
FT                   /note="collected by B.Roy"
FT                   /db_xref="taxon:93888"
FT   mRNA            join(<1..345,591..>1134)
FT                   /product="class I chitinase"
FT   CDS             join(<1..345,591..>1134)
FT                   /codon_start=3
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7G6"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7G6"
FT                   /protein_id="AAF69781.1"
FT                   /translation="RQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPPGPTPTG
FT                   DLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFLGFGTTGDTATRKKEIAA
FT                   FFGQTSHETTGGWASAPDGPFSWGYCFKQEQNPTSNYCEPSATWPCAPGKRYYGRGPMQ
FT                   LSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQ
FT                   PSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC
FT                   YNQRPFGNGLLGAA"
FT   intron          346..590
FT                   /note="short intron 2b"
XX
SQ   Sequence 1134 BP; 291 A; 271 C; 271 G; 300 T; 1 other;
     gtcgtcaagc cggaggagca ctctgtccca acggtctatg ttgcagcgag tttggatggt        60
     gcggtaacac cgaaccatac tgtaagcagc ctggctgcca aagccagtgc actcctccgg       120
     gacccacgcc caccggcgat ctttcgggca tcatttcaag ttctcagttc gacgatatgc       180
     ttaagcatag gaatgatgct gcttgtcctg ctagaggttt ctacacttac aacgccttta       240
     tcaccgctgc gaagtccttc ctcggttttg gcaccaccgg agacaccgcc acgaggaaga       300
     aggagatcgc cgccttcttc ggccagactt cccatgaaac cacaggtact cattaacaat       360
     taacctttgg ttatttcaaa cgtaatttat agttttgaca tttataataa tagttaaaaa       420
     agcaaagttt gaatattttc cacaatatgg ttatttcaaa yttctatacc gtatatcttt       480
     tttttttatt tgggtaaaaa aactcattct aaaactgtaa tcaattattg ttagatgtta       540
     atgtaaagtt gtgactatat attaacgaac cggatggtta tatcatccag gtgggtgggc       600
     ttcagcaccg gacggaccat tttcatgggg ctactgtttc aagcaagaac agaatccaac       660
     ttcaaactac tgtgaaccaa gcgccacgtg gccatgcgca cctggcaaac gctactacgg       720
     aagaggacca atgcagctgt cgtggaacta caattacggt ctatgcggta gagccatagg       780
     agttgactta ctcaacaacc ctgacctcgt agccaacgac gcagtgatcg ctttcaaagc       840
     cgcgatttgg ttctggatga ctgctcagcc tcccaaaccg tcgtgccacg ccgtgatcgc       900
     tgggcagtgg cagccgtcag acgccgaccg tgccgccggg agattaccgg gttacggtgt       960
     gattacgaac atcattaacg gtggattgga gtgcggacgt ggtcaagacg ggagagtcgc      1020
     ggatcgtata gggttttatc agaggtattg taacatattt ggggttaatc ctggtggtaa      1080
     tcttgattgt tacaaccaaa ggccctttgg taacggcctc ctcggcgctg ctat            1134
//
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