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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF135139; SV 1; linear; genomic DNA; STD; PLN; 855 BP.
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AC   AF135139;
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DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Arabis glabra country USA class I chitinase gene, partial cds.
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KW   .
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OS   Turritis glabra (tower rockcress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Turritis.
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RN   [1]
RP   1-855
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
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RN   [2]
RP   1-855
RA   Bishop J.G., Mitchell-Olds T., Dean A.M.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Plank Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..855
FT                   /organism="Turritis glabra"
FT                   /mol_type="genomic DNA"
FT                   /country="USA: Bodega Marine Lab, Sonoma County,
FT                   California"
FT                   /db_xref="taxon:63678"
FT   mRNA            join(<1..356,578..>855)
FT                   /product="class I chitinase"
FT   CDS             join(<1..356,578..>855)
FT                   /codon_start=2
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7G8"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7G8"
FT                   /protein_id="AAF69779.1"
FT                   /translation="CGRQAGGALCPNGRCCSKYGYCGNNELYCKLPDCQSNCWPDGTPP
FT                   GPSDDLSSIITRAQFEDMLLNRDNYQCPAKGFYTYNAFITAAKSFPSFGTTGNTAARKK
FT                   EIAAFFGQTSQQTTGRAPNGPYSWGYCYKEQVNHDPSSIYCDQSQSVTWPCAPGESYYG
FT                   RGPMQLLWNYNYGPCGRDIGVDLLNNPNLVSNDTVIAFKTAIWFWMTA"
FT   intron          357..577
FT                   /note="short intron"
XX
SQ   Sequence 855 BP; 256 A; 188 C; 185 G; 226 T; 0 other;
     atgtggtcgt caagccggag gagcactctg ccccaacggt cgatgctgca gcaagtacgg        60
     atattgcggt aacaacgaac tttattgtaa gctgcctgac tgccaaagca attgctggcc       120
     cgacggtact cctcctggac ccagcgacga tctttcgagc atcattacaa gagctcagtt       180
     cgaagatatg cttctgaata gggacaatta tcaatgtcct gctaaaggtt tctacactta       240
     taacgccttc atcaccgctg caaagtcctt ccctagcttt ggcaccactg gaaacaccgc       300
     agcaaggaag aaggagatcg ccgctttctt tggccaaact tcccaacaaa ccaccggtaa       360
     taatcaccaa tatcggacat cgattgtttg aaacgcaatt tatacgtttt gagtttgcat       420
     gattttttat tttattttaa ataatcttaa aagagatcat tgtaaactac aacgtacgta       480
     taaataatat attaatttag agttgtgaca atatatatca atgaaattgt gttgcaaaaa       540
     aataatatat tgataaaatg gacggttata tgtgcaggta gagcaccgaa cggaccatat       600
     tcatggggct actgttacaa ggaacaagtg aatcatgatc cgtcgtctat ctactgtgac       660
     cagagtcaga gtgtcacgtg gccatgcgca cctggtgaaa gctactacgg aagaggaccg       720
     atgcagctgt tgtggaacta caattacggt ccatgcggga gagacatagg agttgactta       780
     ctcaacaacc caaacttggt gtccaacgac accgtgatcg ctttcaaaac cgcgatttgg       840
     ttctggatga ctgct                                                        855
//
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