EBI Dbfetch

ID   AF135136; SV 1; linear; genomic DNA; STD; PLN; 1444 BP.
XX
AC   AF135136;
XX
DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabis fecunda country USA class I chitinase gene, partial cds.
XX
KW   .
XX
OS   Boechera fecunda
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Boechera.
XX
RN   [1]
RP   1-1444
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
XX
RN   [2]
RP   1-1444
RA   Bishop J.G., Mitchell-Olds T., Dean A.M.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Plank Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1444
FT                   /organism="Boechera fecunda"
FT                   /mol_type="genomic DNA"
FT                   /country="USA: Lolo Cty, MT"
FT                   /db_xref="taxon:93887"
FT   mRNA            join(<1..355,897..1444)
FT                   /product="class I chitinase"
FT   CDS             join(<1..355,897..1444)
FT                   /codon_start=1
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7H1"
FT                   /db_xref="HSSP:1CNS"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7H1"
FT                   /protein_id="AAF69776.1"
FT                   /translation="RQAGGALCPNGLCCSEFGWCGDTEPYCKQPGCQSQCTPGGTPPGP
FT                   TPTGDLSDIISSSQFDYMLMHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKK
FT                   EIAAFFGQTSHETTGGWASAPDGPFSWGYCFKQEVNPYSDYCEPSATWPCAFGKRYYGR
FT                   GPIQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIV
FT                   GQWQPSDADSAAGRLPGYGVITNIINGGLECGRGQDERVANRIGFYQRYCNIFGVNPGD
FT                   NLDCYNQRSFGNGLLDAAI"
FT   intron          356..896
FT                   /note="long intron"
XX
SQ   Sequence 1444 BP; 430 A; 311 C; 304 G; 399 T; 0 other;
     cgtcaagccg gaggagcact ctgtcccaac ggtctatgtt gcagcgagtt tggatggtgc        60
     ggtgacaccg aaccatactg taagcagcct ggctgccaaa gccagtgcac tcccggcggt       120
     actcctccgg gacccacgcc cacaggcgat ctttcggaca tcatttcaag ttcccagttc       180
     gattatatgc ttatgcatag gaatgatgct gcttgtcctg ctagaggttt ctacacttac       240
     aacgccttta tcaccgctgc aaagtccttc cccggttttg gcaccaccgg agacaccgcc       300
     acgaggaaaa aggagatcgc cgccttcttc ggccagactt cccatgaaac cacaggtact       360
     cattaacaat taagctttgg ttatttcaaa cgtaatttat agttttgaca tttataataa       420
     tagttaaaaa aacaaagttt gaatattttc aaatatatag attctccaca atatattcta       480
     gtaaaatttt catacaaaat ggccaaaaac aataaaagtt tgttttgatg tttgcgttta       540
     cagtcgaaaa aattgtttaa atatttttaa aaattagttt atttggtaaa aaaaattaaa       600
     gtagtaataa aagacaacgg tactaaaaat gaaaatttca cgctaagttt tactattttt       660
     actattggta gctcagtagc tgttacaaaa aaaaaaaggg tatattccct accgcaaagc       720
     agaaataacc aatcaaacct atatcaaacg taagcgcaac aacacaactt ctataccata       780
     tatccttttt tttttgttga gtagaaaaac tcattctaaa actgtaatca attattgtta       840
     gatgttaatg taaagttgtg actatatatt aatgaaccgg acggttatat atccaggtgg       900
     gtgggcttca gcacctgacg gaccattttc ttggggctac tgtttcaagc aagaagtgaa       960
     tccatattca gactactgtg aaccaagcgc cacgtggcca tgcgcatttg gcaaacgcta      1020
     ctacggaaga ggaccaatac agctgtcgtg gaactacaat tacggtctat gcggtagagc      1080
     cataggagtt gacttactca acaaccctga cctcgtagcc aacgacgcag tgatcgcttt      1140
     caaagccgcg atttggttct ggatgactgc tcagcctccc aaaccgtcgt gccacgccgt      1200
     gatcgtcggg cagtggcagc cgtcagacgc cgacagtgcc gccgggagat taccgggtta      1260
     cggtgtgatt acgaacatca ttaacggtgg attggagtgc ggacgtggtc aagacgagag      1320
     agtcgcgaat cgtatagggt tttatcagag gtattgtaac atatttgggg ttaatcctgg      1380
     tgataatctt gattgttaca accaaaggtc ctttggtaac ggcctcctcg acgctgctat      1440
     ttaa                                                                   1444
//