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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF135135; SV 1; linear; genomic DNA; STD; PLN; 1087 BP.
XX
AC   AF135135;
XX
DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabis drummondii class I chitinase gene, partial cds.
XX
KW   .
XX
OS   Boechera stricta
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Boechera.
XX
RN   [1]
RP   1-1087
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
XX
RN   [2]
RP   1-1087
RA   Bishop J.G., Mitchell-Olds T., Dean A.M.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Plank Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1087
FT                   /organism="Boechera stricta"
FT                   /mol_type="genomic DNA"
FT                   /country="USA: Cement Creek, Gunnisson County, CO"
FT                   /db_xref="taxon:72658"
FT   mRNA            join(<1..375,544..>1087)
FT                   /product="class I chitinase"
FT   CDS             join(<1..375,544..>1087)
FT                   /codon_start=3
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7H2"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="InterPro:IPR001002"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="InterPro:IPR018371"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7H2"
FT                   /protein_id="AAF69775.1"
FT                   /translation="SAEQCGRQAGGALCPNGLCCSEFGWCGDTEPYCKQPGCQSQCTPG
FT                   GTPPGPTPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGD
FT                   TATRKKEIAAFFGQTSHETTGGWASAPDGPFSWGYCFKQEQNPTSNYCEPSATWPCAPG
FT                   KRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPS
FT                   CHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIF
FT                   GVNPGGNLDCYNQRPFGNGLLGAA"
FT   intron          376..543
FT                   /note="intron 2a"
XX
SQ   Sequence 1087 BP; 277 A; 270 C; 270 G; 270 T; 0 other;
     catcagccga gcaatgtggt cgtcaagccg gaggagcact ctgtcccaac ggtctatgtt        60
     gcagcgagtt tggatggtgc ggtgacaccg aaccatactg taagcagcct ggctgccaaa       120
     gccagtgcac tcccggcggt actcctccgg gacccacgcc caccggcgat ctttcgggca       180
     tcatttcaag ttctcagttc gatgatatgc ttaagcacag gaatgatgct gcttgtcctg       240
     ctagaggttt ctacacttac aacgccttta tcaccgctgc aaagtccttc cccggttttg       300
     gcaccaccgg agacaccgcc acgaggaaga aggagatcgc cgccttcttc ggccagactt       360
     cccatgaaac cacaggtact cattaacaat taagttttgg ttatttcaaa cgtaatttat       420
     agttttgaca tttataataa tagttaaaaa aaacaaagtt tgaatatttt caaatatata       480
     tatttaccac aatatgtaaa gttgtgacta tatattaatg aaccggatgg ttatatcatc       540
     caggtgggtg ggcttcagca ccggacggac cattttcatg gggctactgt ttcaagcaag       600
     aacagaatcc aacttcaaac tactgtgaac caagcgccac gtggccatgc gcacctggca       660
     aacgctacta cggaagagga ccaatgcagc tgtcgtggaa ctacaattac ggtctatgcg       720
     gtagagccat aggagttgac ttactcaaca accctgacct cgtagccaac gacgcagtga       780
     tcgctttcaa agccgcgatt tggttctgga tgactgctca gcctcccaaa ccgtcgtgcc       840
     acgccgtgat cgctgggcag tggcagccgt cagacgccga ccgtgccgcc gggagattac       900
     cgggttacgg tgtgattacg aacatcatta acggtggatt ggagtgcgga cgtggtcaag       960
     acgggagagt cgcggatcgt atagggtttt atcagaggta ttgtaacata tttggggtta      1020
     atcctggtgg taatcttgat tgttacaacc aaaggccctt tggtaacggc ctcctcggcg      1080
     ctgctat                                                                1087
//
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