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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF135128; SV 1; linear; genomic DNA; STD; PLN; 969 BP.
XX
AC   AF135128;
XX
DT   14-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Arabis alpina class I chitinase gene, partial cds.
XX
KW   .
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OS   Arabis alpina (gray rockcress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabis.
XX
RN   [1]
RP   1-969
RX   DOI; 10.1073/pnas.97.10.5322
RX   PUBMED; 10805791.
RA   Bishop J.G., Dean A.M., Mitchell-Olds T.;
RT   "Rapid evolution in plant chitinases: molecular targets of selection in
RT   plant-pathogen coevolution";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(10):5322-5327(2000).
XX
RN   [2]
RP   1-969
RA   Bishop J.G., Mitchell-Olds T.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Genetics, Max Planck Institute for Chemical Ecology, Tatzendpromenade 1a,
RL   Jena 07745, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..969
FT                   /organism="Arabis alpina"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:50452"
FT   mRNA            join(<1..351,683..>969)
FT                   /product="class I chitinase"
FT   CDS             join(<1..351,683..>969)
FT                   /codon_start=3
FT                   /product="class I chitinase"
FT                   /db_xref="GOA:Q9M7H9"
FT                   /db_xref="HSSP:1CNS"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="InterPro:IPR001002"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="InterPro:IPR018371"
FT                   /db_xref="UniProtKB/TrEMBL:Q9M7H9"
FT                   /protein_id="AAF69768.1"
FT                   /translation="RRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPP
FT                   GGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEV
FT                   AAFFGQTSHETTGGWASAPDGPFSWGYCFKQEQNPTSDYCQPSATWPCAPGKRYYGRGP
FT                   MQLSWNYDYGLCGGAIGVDLINNPDLVANDAVIAFKAGLERRHRGESSL"
FT   intron          350..682
XX
SQ   Sequence 969 BP; 269 A; 222 C; 213 G; 265 T; 0 other;
     cccgtcgtca agccggagga gcactctgtc ccaacggtct atgttgcagc gagtttggat        60
     ggtgcggtaa caccgaacca tactgtaagc agcctggctg ccaaagccag tgcactcccg       120
     gcggcactcc tcctccgggt ggcgatcttt cgggcatcat ttcaagttcc cagttcgatg       180
     atatgcttaa gcataggaat gatgctgctt gtcctgctag aggtttctac acttacaacg       240
     cctttatcac cgctgcaaag tccttccccg gttttggcac caccggagac accgccacga       300
     ggaagaagga ggtcgccgcc ttcttcggcc agacttccca tgaaaccaca ggtactcatt       360
     aacaattaag ctttggttat ttcaaacgta atttatagtt ttgacattta taataatagt       420
     taaaaaccaa agtttgaata ttttctaaca tataaatttt ccgcgatata ttatatttta       480
     caaacaaaat ggccaaaaac aataaaattt tgttttggtc tttggtgttt gcgtttaaaa       540
     aattgtttaa atattttaac gttgtgacta tatattaatg aacaactata tatacttgtg       600
     aaataactgt aatcaattat tgttagatgt taatgtaaag ttgtgactat ataataatga       660
     accggacggt tatatcgtcc aggtgggtgg gcttcagcac cggacggacc attttcatgg       720
     ggctactgtt tcaagcaaga acagaatcca acttcagact actgtcaacc aagcgccacg       780
     tggccatgcg cacctggcaa acgctactac ggaagaggac caatgcagct gtcgtggaac       840
     tacgattacg gtctatgcgg tggagccata ggagttgact taatcaacaa ccctgacctc       900
     gtagccaatg acgcagtgat cgctttcaaa gccgggctag agcgccgcca ccgcggggag       960
     tccagtttg                                                               969
//
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