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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF134428; SV 1; linear; genomic DNA; STD; HUM; 691 BP.
XX
AC   AF134428;
XX
DT   26-APR-1999 (Rel. 59, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Homo sapiens and cis-AB-specific alpha 1->3
DE   N-acetylgalactosaminyltransferase (ABO) gene, ABO-*cis-AB01 allele, exon 7
DE   and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-691
RA   Yamamoto F.;
RT   "Human histo-blood group ABO gene locus alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-691
RA   Yamamoto F.;
RT   ;
RL   Submitted (12-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   The Burnham Institute, 10901 N. Torrey Pines Rd., La Jolla, CA 92037, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..691
FT                   /organism="Homo sapiens"
FT                   /chromosome="9"
FT                   /map="9q34"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   mRNA            join(AF134427.1:<1..135,1..>691)
FT                   /gene="ABO"
FT                   /product="cis-AB-specific alpha 1->3
FT                   N-acetylgalactosaminyltransferase"
FT   CDS             join(AF134427.1:<1..135,1..691)
FT                   /codon_start=2
FT                   /gene="ABO"
FT                   /product="cis-AB-specific alpha 1->3
FT                   N-acetylgalactosaminyltransferase"
FT                   /note="also functions as an alpha 1->3
FT                   galactosyltransferase."
FT                   /db_xref="GOA:Q9UQ65"
FT                   /db_xref="HGNC:79"
FT                   /db_xref="HSSP:1LZ0"
FT                   /db_xref="InterPro:IPR005076"
FT                   /db_xref="UniProtKB/TrEMBL:Q9UQ65"
FT                   /protein_id="AAD26580.1"
FT                   /translation="RKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKK
FT                   YVAFLKLFLETAEKHFMVGHRVHYYVFTDQLAAVPRVTLGTGRQLSVLEVRAYKRWQDV
FT                   SMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREA
FT                   FTYERRPQSQAYIPKDEGDFYYLGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHD
FT                   ESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP"
FT   exon            1..>691
FT                   /gene="ABO"
FT                   /number=7
XX
SQ   Sequence 691 BP; 122 A; 220 C; 229 G; 120 T; 0 other;
     atacgtggct ttcctgaagc tgttcctgga gacggcggag aagcacttca tggtgggcca        60
     ccgtgtccac tactatgtct tcaccgacca gctggccgcg gtgccccgcg tgacgctggg       120
     gaccggtcgg cagctgtcag tgctggaggt gcgcgcctac aagcgctggc aggacgtgtc       180
     catgcgccgc atggagatga tcagtgactt ctgcgagcgg cgcttcctca gcgaggtgga       240
     ttacctggtg tgcgtggacg tggacatgga gttccgcgac cacgtgggcg tggagatcct       300
     gactccgctg ttcggcaccc tgcaccccgg cttctacgga agcagccggg aggccttcac       360
     ctacgagcgc cggccccagt cccaggccta catccccaag gacgagggcg atttctacta       420
     cctgggggcg ttcttcgggg ggtcggtgca agaggtgcag cggctcacca gggcctgcca       480
     ccaggccatg atggtcgacc aggccaacgg catcgaggcc gtgtggcacg acgagagcca       540
     cctgaacaag tacctgctgc gccacaaacc caccaaggtg ctctcccccg agtacttgtg       600
     ggaccagcag ctgctgggct ggcccgccgt cctgaggaag ctgaggttca ctgcggtgcc       660
     caagaaccac caggcggtcc ggaacccgtg a                                      691
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