EBI Dbfetch

ID   AF128264; SV 1; linear; genomic DNA; STD; PRO; 1782 BP.
XX
AC   AF128264;
XX
DT   03-MAR-2000 (Rel. 62, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Streptococcus gordonii dihydroorotate dehydrogenase (pyrD) gene, partial
DE   cds; methionine sulfoxide reductase (msrA) gene, complete cds; and unknown
DE   gene.
XX
KW   .
XX
OS   Streptococcus gordonii
OC   Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
XX
RN   [1]
RP   1-1782
RX   DOI; 10.1128/IAI.68.3.1061-1068.2000
RX   PUBMED; 10678908.
RA   Vriesema A.J.M., Dankert J., Zaat S.A.J.;
RT   "A shift from oral to blood pH is a stimulus for adaptive gene expression
RT   of Streptococcus gordonii CH1 and induces protection against oxidative
RT   stress and enhanced bacterial growth by expression of msrA";
RL   Infect. Immun. 68(3):1061-1068(2000).
XX
RN   [2]
RP   1-1782
RA   Vriesema A.J.M., Dankert J., Zaat S.A.J.;
RT   ;
RL   Submitted (13-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology, Academic Medical Center, University of Amsterdam,
RL   Meibergdreef 15, Amsterdam 1105 AZ, Netherlands
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1782
FT                   /organism="Streptococcus gordonii"
FT                   /strain="CH1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1302"
FT   CDS             <1..355
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="pyrD"
FT                   /product="dihydroorotate dehydrogenase"
FT                   /function="catalyzes conversion of L-dihydroorotate to
FT                   orotate in pyrimidine biosynthesis"
FT                   /db_xref="GOA:Q9LAN0"
FT                   /db_xref="HSSP:1JUB"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:Q9LAN0"
FT                   /protein_id="AAF36476.1"
FT                   /translation="IGNGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKP
FT                   EIQIIGTGGVLTGRDAFEHILCGASMVQVGTTLHKEGVVAFERITAKLKTIMEEKGYES
FT                   LEDFRGKLKYIEE"
FT   -35_signal      429..434
FT                   /gene="msrA"
FT   -10_signal      451..456
FT                   /gene="msrA"
FT   RBS             508..511
FT                   /gene="msrA"
FT   CDS             519..1454
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="msrA"
FT                   /product="methionine sulfoxide reductase"
FT                   /db_xref="GOA:Q9LAM9"
FT                   /db_xref="HSSP:1L1D"
FT                   /db_xref="InterPro:IPR002569"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9LAM9"
FT                   /protein_id="AAF36477.1"
FT                   /translation="MAEIYLAGGCFWGLEEYFSRIEGVKKTTVGYANGQVESTNYQLIH
FT                   QTDHAETVHLIYDEKRVSLREILLYYFRVIDPLSVNKQGNDVGRQYRTGVYYTNQADKA
FT                   VIEQVFAEQEKQLGQKIAVELEPLRHYVLAEDYHQDYLKKNPGGYCHINVNDAYQPLVD
FT                   PGQYEKPTDAELKEQLTQEQYQVTQLSATERPFHNAYNATFEEGIYVDVTTGEPLFFAG
FT                   DKFESGCGWPSFSRPIAREVLRYYEDKSHGMERIEVRSRSGNAHLGHVFTDGPESAGGL
FT                   RYCINSAALRFIPKEKMEAEGYAYLLQHMK"
FT   stem_loop       1453..1472
FT   -35_signal      1483..1488
FT   -10_signal      1506..1511
FT   RBS             1527..1532
FT   CDS             1539..>1782
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="unknown"
FT                   /note="ORF"
FT                   /db_xref="UniProtKB/TrEMBL:Q9LAM8"
FT                   /protein_id="AAF36478.1"
FT                   /translation="MKLKRFSTILLTILTIITLTACKSNGKGQANSNKPTEESSSSKSE
FT                   EKTKSTSKEEKTSKETQSSSKESGEKDNSGFSEKRE"
XX
SQ   Sequence 1782 BP; 555 A; 335 C; 436 G; 456 T; 0 other;
     gatcggaaac ggcctttata tagaagatga gtcagtagtc attcgtccga aaaatggctt        60
     tggaggtatc ggtggtcagt acatcaagcc gaccgctctg gccaatgtcc atgcttttta       120
     ccaacgcctg aaaccagaaa tccaaatcat cggaactggt ggtgtcttga cagggcggga       180
     tgcttttgag catatcctct gtggagccag tatggtgcag gtcggaacaa cccttcataa       240
     agaaggagtg gtagccttcg agcgcatcac cgcaaaactc aagactatta tggaagaaaa       300
     aggctatgaa agtctggaag atttccgagg aaaattgaaa tatattgagg agtaatcttc       360
     tatacaagcg ttgttgtgat ttgaaatgaa gaatatggct gggttgagaa gtattgaaac       420
     ctagcttttt catattattt tgaagaaagt tctaatcaaa ttgctataat ttcgactcct       480
     tttatgagaa aatagacgca aagaaatgag gtgtttttat ggctgaaatt tatctagcag       540
     gcgggtgttt ctggggcttg gaagagtatt tctcccgcat tgaaggtgtt aagaaaacga       600
     cagtgggata cgccaatgga caggtggaat caaccaacta ccagctgatt catcaaacgg       660
     accatgcaga gacggttcat ctaatctatg atgaaaagcg ggtcagcctg cgggaaatcc       720
     tgctttatta tttccgagtt attgatcctc tgtcggtcaa taagcaggga aatgatgtag       780
     gacgccagta tcggacaggt gtttactata ccaatcaagc cgataaggcg gtcattgaac       840
     aggtctttgc tgagcaggaa aagcagttgg gacaaaagat tgctgttgag ttggaacctt       900
     tgcgccacta tgtcctagcc gaagactacc atcaggatta tctcaagaaa aatcccggtg       960
     gctactgtca tatcaatgtc aatgacgcct atcagccctt ggtcgatcct ggccaatatg      1020
     agaaacctac agatgcggaa ctgaaagaac agttgacgca agagcaatac caggtgaccc      1080
     agctcagtgc gacagagcgt cctttccaca atgcctacaa tgccactttt gaagaaggaa      1140
     tttatgttga tgtgacgact ggggagcctc tcttttttgc cggtgacaag tttgagtctg      1200
     gctgcggctg gcctagcttt agtcggccta ttgccagaga agttctgaga tactatgaag      1260
     acaagagtca tggcatggag cggattgaag tgcgcagccg ttctggcaat gcccatctgg      1320
     gccatgtctt tactgacggt ccagagtcag cgggcggtct tcgctactgc atcaactccg      1380
     cagctctgcg atttattcca aaagaaaaaa tggaagcaga aggttatgct tatctacttc      1440
     aacacatgaa ataaaaggcc atcaggcctt ttttgctgag cgttggcaaa agtttttaga      1500
     taagggataa tgatcataat aaaaatgagg agtgaaagat gaaattaaaa agattttcga      1560
     cgattttact tactatttta acgattatca ctctaactgc ttgtaaatct aatggtaaag      1620
     ggcaggctaa ttcgaataaa ccaactgaag aaagttcaag ctcaaaatca gaagaaaaga      1680
     ctaagtcaac tagtaaagaa gagaaaacta gtaaagagac ccagtcgtca agtaaggaaa      1740
     gtggagagaa ggataattct ggattctcag aaaaaaggga ag                         1782
//