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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF127576; SV 1; linear; genomic DNA; STD; PRO; 1116 BP.
XX
AC   AF127576;
XX
DT   01-JUN-1999 (Rel. 59, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Streptomyces viridosporus alkyl hydroperoxide reductase (ahpC) and (ahpX)
DE   genes, complete cds.
XX
KW   .
XX
OS   Streptomyces viridosporus
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
XX
RN   [1]
RP   1-1116
RX   PUBMED; 10902909.
RA   Ramachandran S., Magnuson T.S., Crawford D.L.;
RT   "Isolation and analysis of three peroxide sensor regulatory gene homologs
RT   ahpC, ahpX and oxyR in Streptomyces viridosporus T7A--a lignocellulose
RT   degrading actinomycete";
RL   DNA Seq. 11(1-2):51-60(2000).
XX
RN   [2]
RP   1-1116
RA   Ramachandran S., Crawford D.L.;
RT   ;
RL   Submitted (11-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Department of Microbiology, Molecular Biology and Biochemistry, University
RL   of Idaho, LSN 125, Gibb Hall, Moscow, ID 83844-3052, USA
XX
DR   StrainInfo; 111693; T7A.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1116
FT                   /organism="Streptomyces viridosporus"
FT                   /strain="T7A"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:67581"
FT   CDS             1..585
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ahpC"
FT                   /product="alkyl hydroperoxide reductase"
FT                   /note="similar to alkyl hydroperoxide reductase subunit
FT                   AhpC"
FT                   /db_xref="GOA:Q9X5V0"
FT                   /db_xref="HSSP:1E2Y"
FT                   /db_xref="InterPro:IPR000866"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="InterPro:IPR012336"
FT                   /db_xref="InterPro:IPR017936"
FT                   /db_xref="UniProtKB/TrEMBL:Q9X5V0"
FT                   /protein_id="AAD33340.1"
FT                   /translation="MGASSLQGEPVLTVGDKFPEFELTACVSLEKGKEFETINHKTYEG
FT                   KWKIVFAWPKDFTFVCPTEIAAFGKLNDEFADRDAQILGFSGDSEFVHHAWRKDHDDLR
FT                   DLPFPMMADSKHELMRALGIEGEDGFAKRAVFIVDQNNEIQFTMVTAGSVGRNPKEVLR
FT                   VLDALQTDELCPCNWTKGDETLDPVALLAGE"
FT   CDS             592..1116
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ahpX"
FT                   /product="unknown"
FT                   /db_xref="GOA:Q9X5V1"
FT                   /db_xref="HSSP:1KNC"
FT                   /db_xref="InterPro:IPR003779"
FT                   /db_xref="InterPro:IPR004674"
FT                   /db_xref="InterPro:IPR004675"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9X5V1"
FT                   /protein_id="AAD33341.1"
FT                   /translation="MSLDSLKSRIPDYAKDLKLNLGSVIGNSGLPAQQLWGTVLSTAIA
FT                   SRSAIVLRELEPEAKANLSPEAYTAAKAAAAVMAMNNVFYRTRHLLSDHEYGNLRAGLR
FT                   MNVIGNPGVDKVDFEFWSFAVSAINGCGMCLDSTKQVLRKAGVERRSSRRRSDCRGTQA
FT                   VAATLDAEAFS"
XX
SQ   Sequence 1116 BP; 198 A; 378 C; 360 G; 180 T; 0 other;
     atgggtgctt cttcgctgca aggagagcct gtgctcactg tcggtgacaa gttccccgag        60
     ttcgaactga ccgcctgcgt ctcgctggag aagggcaagg agttcgagac catcaaccac       120
     aagacctacg agggcaagtg gaagatcgtc ttcgcctggc ccaaggactt caccttcgtg       180
     tgcccgaccg agatcgcggc cttcggcaag ctgaacgacg agttcgccga ccgcgacgcc       240
     cagatcctcg gcttctccgg tgactccgag ttcgtccacc acgcctggcg caaggaccac       300
     gacgacctgc gtgacctgcc gttcccgatg atggcggact ccaagcacga gctgatgcgc       360
     gccctcggca tcgagggcga ggacggcttc gccaagcgcg cggtgttcat cgtcgaccag       420
     aacaacgaga tccagttcac gatggtgacc gccggctccg tcggccgtaa cccgaaggag       480
     gtcctgcggg tcctggacgc cctgcagacc gacgagctct gcccgtgcaa ctggaccaag       540
     ggcgacgaga ccctggaccc ggtcgcgctg ctggccgggg agtgacctga catgtcgctc       600
     gactccctga agtcccgcat accggactac gccaaggacc tgaagctcaa cctgggctcg       660
     gtcatcggca actccggcct cccggcccag cagctgtggg gcacggtgct gtcgacggcg       720
     atcgcctcgc gctcggccat cgtgctgcgc gagctggagc cggaggcgaa ggcgaacctg       780
     tcgccggagg cgtacacggc cgccaaggcc gccgccgcgg tgatggcgat gaacaacgtc       840
     ttctaccgca cccgtcacct gctgtcggac cacgagtacg gcaacctgcg cgccggtctg       900
     cggatgaacg tcatcggcaa cccgggcgtc gacaaggtcg acttcgagtt ctggtccttc       960
     gcggtctccg cgatcaacgg ctgcggcatg tgcctcgact ccacgaagca ggtgctgcgc      1020
     aaggccggcg tggagcgcag gtcatccagg aggcgttcag attgccgcgg tacccaggcg      1080
     gtcgccgcca cgctggacgc cgaggcgttc tcctga                                1116
//
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