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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF126542; SV 1; linear; genomic DNA; STD; PRO; 1657 BP.
XX
AC   AF126542;
XX
DT   09-JUL-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Chryseobacterium meningosepticum putative L-serine deaminase SdaA (sdaA)
DE   gene, partial cds; and beta-lactamase BlaB2 (blaB2) gene, complete cds.
XX
KW   .
XX
OS   Elizabethkingia meningoseptica
OC   Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
OC   Flavobacteriaceae; Elizabethkingia.
XX
RN   [1]
RP   1-1657
RX   DOI; 10.1128/AAC.44.6.1448-1452.2000
RX   PUBMED; 10817691.
RA   Woodford N., Palepou M.-F.I., Babini G.S., Holmes B., Livermore D.M.;
RT   "Carbapenemases of Chryseobacterium (Flavobacterium) meningosepticum:
RT   distribution of blaB and characterization of a novel metallo-beta-lactamase
RT   gene, blaB3, in the type strain, NCTC 10016";
RL   Antimicrob. Agents Chemother. 44(6):1448-1452(2000).
XX
RN   [2]
RP   1-1657
RA   Woodford N., Babini G.S., Palepou M.-F.I., Livermore D.M.;
RT   ;
RL   Submitted (08-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   ARMRL, CPHL, 61 COlindale Avenue, London NW9 5HT, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1657
FT                   /organism="Elizabethkingia meningoseptica"
FT                   /strain="97/P/5448"
FT                   /mol_type="genomic DNA"
FT                   /note="synonym:Flavobacterium meningosepticum"
FT                   /db_xref="taxon:238"
FT   CDS             <1..846
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="sdaA"
FT                   /product="putative L-serine deaminase SdaA"
FT                   /db_xref="GOA:Q9XCV3"
FT                   /db_xref="InterPro:IPR005130"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XCV3"
FT                   /protein_id="AAD43144.1"
FT                   /translation="DLILLNEESWRSEEETRKQALYIWQQIKECIYKGVNREGILPGGL
FT                   NVTRRAAGINRKLLGDKIYKNINDWFQLVVDAEETFSTINKWVSCFALAVNEENASFGR
FT                   IITAPTNGASGVIPAVLMFSQCFTEHTSEDDIVRFLIVAGEIGTLFKKNATISAAMGGC
FT                   QAEIGVSSAMAAAGLTEIMGGSPKQVLQAAEIAMEHHLGLTCDPIGGLVQIPCIERNSM
FT                   GAIKAITASNIALESNPDNARVSLDQVIKSMWETALDMNTKYKETSEGGLAVAVNVAEC
FT                   "
FT   CDS             866..1615
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="blaB2"
FT                   /product="beta-lactamase BlaB2"
FT                   /db_xref="GOA:Q9RB01"
FT                   /db_xref="HSSP:1BC2"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9RB01"
FT                   /protein_id="AAD43145.1"
FT                   /translation="MLKKIKISLILALGLTSLQAFGQENPDVKIDKLKDNLYVYTTYNT
FT                   FNGTKYAANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRA
FT                   GGLEYFGKIGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTA
FT                   DNVVVWFPKEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGH
FT                   DDWKDQRSIQRTLDLINEYQQKQKASN"
XX
SQ   Sequence 1657 BP; 577 A; 254 C; 375 G; 451 T; 0 other;
     gatcttattc ttttaaatga ggaatcatgg agatcagaag aagaaacgcg caagcaggca        60
     ttatacattt ggcagcagat taaagaatgt atttacaaag gtgtaaaccg tgaaggtatt       120
     cttccgggtg gattaaatgt tacacgccga gcagccggaa ttaacagaaa gcttttgggt       180
     gataaaattt ataaaaatat aaatgattgg ttccaattgg tagtagatgc tgaagaaacc       240
     ttcagtacaa ttaataaatg ggtgagttgc tttgcccttg ccgtaaacga agaaaatgcc       300
     tctttcggaa gaattatcac cgcacctaca aatggcgcca gtggggtgat tcctgcagtt       360
     ttgatgtttt cgcaatgctt tacagaacat acctcggaag atgatattgt aagattttta       420
     attgtagccg gagaaatagg aacattattt aaaaagaatg caacaatctc ggcggcaatg       480
     ggaggttgtc aggcagagat cggagtgtct tcagcaatgg cagcagccgg actaaccgaa       540
     attatgggag gctcaccaaa acaggtatta caagcggcag aaattgctat ggagcaccat       600
     ttaggattaa catgcgatcc gattggcgga cttgtgcaga ttccttgtat tgagagaaac       660
     tcgatgggag caattaaagc tattacggct tccaatattg cattggaatc taatccggat       720
     aatgcaaggg tttcattgga tcaggtgatt aaatcgatgt gggagactgc tttggatatg       780
     aataccaagt ataaagaaac ttcggaagga gggttggctg ttgcagtgaa tgtagcagag       840
     tgttaatgat aaaattgaat aagaaatgtt gaaaaaaata aaaataagct tgattcttgc       900
     tcttgggctt accagtctgc aggcatttgg acaggagaat cctgacgtta aaattgataa       960
     gctaaaagat aatctgtatg tatacacaac ctacaataca tttaacggga ctaaatatgc      1020
     cgctaatgca gtatatctgg taactgataa gggtgttgtg gttatagact gtccgtgggg      1080
     agaagacaaa tttaaaagct ttacggacga gatttataaa aaacacggaa agaaagttat      1140
     tatgaatatt gcaacacatt ctcatgatga tcgtgccgga ggtcttgaat attttggtaa      1200
     aataggtgca aaaacttatt ctactaaaat gacagattct attttagcaa aagagaataa      1260
     gccaagagca caatatactt ttgacaataa taaatctttc aaagtaggaa aatccgagtt      1320
     tcaggtttac tatcccggaa aaggacatac agcagataat gtggtggtat ggtttccaaa      1380
     agaaaaagta ttggttggag gttgtattat aaaaagcgct gattcaaaag acctggggta      1440
     tattggagaa gcatatgtaa acgactggac gcagtctgta cacaatattc aacaaaagtt      1500
     ttccggtgct cagtacgttg ttgcagggca tgatgattgg aaagatcaaa gatcaataca      1560
     acgtacacta gacttaatca atgaatatca acaaaaacaa aaggcttcaa attaatgaag      1620
     cctttttcct taatttaaac tgaacgctta accagac                               1657
//
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