 |
|
EBI DbfetchID AF126051; SV 1; linear; genomic DNA; STD; PRO; 2842 BP. XX AC AF126051; XX DT 22-JUL-1999 (Rel. 60, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Lactobacillus manihotivorans alpha-amylase precursor, gene, complete cds. XX KW . XX OS Lactobacillus manihotivorans OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. XX RN [1] RP 1-2842 RX PUBMED; 11697143. RA Morlon-Guyot J., Mucciolo-Roux F., Rodriguez Sanoja R., Guyot J.P.; RT "Characterization of the L. manihotivorans alpha-amylase gene"; RL DNA Seq. 12(1):27-37(2001). XX RN [2] RP 1-2842 RA Morlon-Guyot J., Jacobe de Haut I., Mucciolo-Roux F., Guyot J.P.; RT ; RL Submitted (04-FEB-1999) to the EMBL/GenBank/DDBJ databases. RL Biotechnology, IRD (ex ORSTOM), 911, Avenue Agropolis, Montpellier 34032, RL France XX FH Key Location/Qualifiers FH FT source 1..2842 FT /organism="Lactobacillus manihotivorans" FT /strain="LMG 18010T" FT /mol_type="genomic DNA" FT /db_xref="taxon:88233" FT CDS 117..2822 FT /codon_start=1 FT /transl_table=11 FT /product="alpha-amylase precursor" FT /note="hydrolase" FT /db_xref="GOA:Q9XCV8" FT /db_xref="HSSP:1BAG" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q9XCV8" FT /protein_id="AAD45245.1" FT /translation="MKKKKSFWLVSFLVIVASVFFISFGLSNHSKQVVQADSDTTSTDD FT SSNDTADSVSDGVILHAWCWSFNTIKNNLKQIHDAGYTTVQTSPVNEVKVGNSASKSLN FT NWYWLYQPTKYSIGNYYLGTEAEFKSMCAAAKEYNIRIIVEATLNDTTSDYRQFSVEIK FT SISNWTHGNTQISNWSIREDVTQNSLLGLYGLNAQNSQVQTYLKNYLERLISDGASGFR FT YDAAKHIELPSQYDGSYGSNFWPNITDNGSEFQYGEVLQDSISKESDYANYMSVTASNY FT GNTIRNALKNRDFTASTLQNFNISVPASKLVTWVESHDNYANDDQVSTRMNSSDIKLGW FT AVVASRSGSVPLFFDRPVDGGNGTRFPGSSEIGDAGSSLYYDKAVVAVNKFHNAMAGQS FT EYISNPNGNTKIFENERGSKGVVFANASDSSYSLNVKTSLADGTYENKAGSDEFTVKNG FT YLTGTIQGREVVVLYGDPTSSSSSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAIT FT SAWPGKEMTALGNDEYELDLDTDEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQN FT GVVTTSDSSSSSSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAITSAWPGKEMTAL FT GNDEYELDLDTDEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQNGVVTTSDSSSS FT SSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAITSAWPGKEMTALGNDEYELDLDT FT DEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQNGVVTTSDTKKVYFEKPSSWGST FT VYAYVYNKNTNKAITSAWPGKEMTALGNDEYELDLDTDEDDSDLAVIFTDGTNQTPAAN FT EAGFTFTADATYDQNGVVTTSDSSSTSSSS" FT repeat_region 1545..2819 FT /rpt_type=DIRECT FT /rpt_unit_range=1580..1853 XX SQ Sequence 2842 BP; 913 A; 474 C; 597 G; 858 T; 0 other; tttcgatttt tatgaaaacg gtcgtaaaga agctagcaaa aatatataat ttcttttgaa 60 agtgttcact aggccaagct gcagtttcaa tattttaata aagggggcag taaaaagtga 120 aaaaaaagaa aagtttctgg cttgtttctt ttttagttat agtagctagt gttttcttta 180 tatcttttgg attgagcaat cattctaaac aagttgttca agcggatagt gatacgacat 240 caactgatga ctcaagcaat gatacagctg attctgttag cgacggtgtt attttgcatg 300 catggtgctg gtcgttcaac acgattaaaa acaacttgaa acagattcat gacgccggct 360 acacaacggt tcaaacttca cctgttaatg aagttaaagt tggaaatagc gcgtctaagt 420 cattaaacaa ctggtattgg ctatatcagc caactaaata tagtattggt aactattatt 480 taggaacgga agctgaattt aagtcaatgt gcgctgctgc taaagaatat aatatcagga 540 tcattgtcga agcaactctg aatgatacaa caagtgatta taggcaattt tcggttgaaa 600 ttaaaagtat ttcaaattgg acacatggta acacacaaat ttcgaattgg agtattcggg 660 aagatgtaac tcaaaattcg ttgttaggtt tatatggatt gaatgctcaa aattctcaag 720 ttcagacgta tttgaagaat tatttggaac gcttgatttc tgacggagct tcaggctttc 780 gttatgatgc agctaagcat attgaacttc caagtcaata tgatggcagc tatggcagca 840 atttctggcc aaatattact gataatgggt ctgaatttca gtatggtgaa gttttgcagg 900 actcgatttc aaaagaatca gattatgcta attacatgag tgttacagct tcaaattacg 960 gcaatacgat tcgcaatgcg ttaaagaatc gtgattttac cgcaagtact ttgcagaatt 1020 tcaacatcag tgttccagct tctaaattag taacttgggt cgaatcgcat gataattatg 1080 ctaacgatga tcaagtttcg actaggatga atagtagtga tattaaatta ggctgggctg 1140 ttgttgcttc gcgttctggt agtgttccgc tgttctttga ccgtccagtt gatggtggta 1200 atggtactcg gttccctggc agttcagaaa ttggtgatgc tggcagcagt ttgtattatg 1260 ataaagcagt tgtagctgtt aataaattcc ataatgcaat ggctggtcaa tctgaatata 1320 tttctaatcc aaatggcaat accaagattt ttgaaaatga acgtggcagc aaaggggttg 1380 tttttgcaaa cgcttccgac agttcatata gtttgaatgt taaaactagt ttagctgatg 1440 ggacttatga aaacaaggct ggttcagatg aatttaccgt taaaaatggt tatttaaccg 1500 gtacaattca aggacgtgaa gttgttgttc tttacgggga tccaacaagc agcagcagta 1560 gtagtacaac aacagaaact aaaaaggttt attttgaaaa gccttcaagt tggggtagta 1620 cagtttatgc ctatgtttat aataaaaata cgaataaagc tataacttca gcttggcctg 1680 gcaaagaaat gaccgcttta ggcaacgacg aatatgaatt ggatctcgac actgatgaag 1740 atgactctga tttagctgtt atctttaccg atgggacaaa tcaaacacca gcagctaatg 1800 aggctggttt tacctttacg gctgatgcca cttatgatca aaatggtgtc gtaacaactt 1860 ctgattcaag cagcagcagt agtagtacaa caacagaaac taaaaaggtt tattttgaaa 1920 agccttcaag ttggggtagt acagtttatg cctatgttta taataaaaat acgaataaag 1980 ctataacttc agcttggcct ggcaaagaaa tgaccgcttt aggcaacgac gaatatgaat 2040 tggatctcga cactgatgaa gatgactctg atttagctgt tatctttacc gatgggacaa 2100 atcaaacacc agcagctaat gaggctggtt ttacctttac ggctgatgcc acttatgatc 2160 aaaatggtgt cgtaacaact tctgattcaa gcagcagcag tagtagtaca acaacagaaa 2220 ctaaaaaggt ttattttgaa aagccttcaa gttggggtag tacagtttat gcctatgttt 2280 ataataaaaa tacgaataaa gctataactt cagcttggcc tggcaaagaa atgaccgctt 2340 taggcaacga cgaatatgaa ttggatctcg acactgatga agatgactct gatttagctg 2400 ttatctttac cgatgggaca aatcaaacac cagcagctaa tgaggctggt tttaccttta 2460 cggctgatgc cacttatgat caaaatggtg tcgtaacaac ttctgatact aaaaaggttt 2520 attttgaaaa gccttcaagt tggggtagta cagtttatgc ctatgtttat aataaaaata 2580 cgaataaagc tataacttca gcttggcctg gcaaagaaat gaccgcttta ggcaacgacg 2640 aatatgaatt ggatctcgac actgatgaag atgactctga tttagctgtt atctttaccg 2700 atgggacaaa tcaaacacca gcagctaatg aggctggttt tacctttacg gctgatgcca 2760 cttatgatca aaatggtgtc gtaacaactt ctgattcaag cagcacatca agcagttcgt 2820 aagccgatac cagcagttca tc 2842 // |
|