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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF125895; SV 1; linear; genomic DNA; STD; PRO; 393 BP.
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AC   AF125895;
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DT   11-AUG-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Butyrivibrio fibrisolvens strain H17c(SA) xylanase (xynF) gene, partial
DE   cds.
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KW   .
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OS   Butyrivibrio fibrisolvens
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
OC   Butyrivibrio.
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RN   [1]
RP   1-393
RX   PUBMED; 10427063.
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   "Distribution and evolution of the xylanase genes xynA and xynB and their
RT   homologues in strains of Butyrivibrio fibrisolvens";
RL   Appl. Environ. Microbiol. 65(8):3660-3667(1999).
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RN   [2]
RP   1-393
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   ;
RL   Submitted (04-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Rumen Biotechnology, CSIRO Tropical Agriculture, Private Bag No 3,
RL   Indooroopilly, QLD 4068, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1..393
FT                   /organism="Butyrivibrio fibrisolvens"
FT                   /strain="H17c(SA)"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:831"
FT   CDS             <1..>393
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynF"
FT                   /product="xylanase"
FT                   /db_xref="GOA:Q9S4N2"
FT                   /db_xref="HSSP:1HIZ"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9S4N2"
FT                   /protein_id="AAD48392.1"
FT                   /translation="HSQTPTWFFRNGFSGNGGFVNQSTMDARLEFYVKTVLNHVYSSQY
FT                   GSVVVYWDVANEIMHAQNSGWEAVYGNNKTNATYVKKAFNYAYECLEYFKLTDKVKLFY
FT                   NDYNTYMVVNDEIKLVNYINQGKKVCA"
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SQ   Sequence 393 BP; 120 A; 67 C; 90 G; 116 T; 0 other;
     cattcacaga ctccgacttg gtttttcagg aatggctttt caggcaatgg cggatttgta        60
     aatcagtcta caatggatgc tcgtcttgag ttctatgtta agacagttct caatcatgtg       120
     tattcaagcc agtatggaag cgtagttgta tattgggatg ttgccaatga gatcatgcat       180
     gctcagaact caggttggga ggctgtgtat ggaaacaaca agacaaacgc gacatatgta       240
     aaaaaggctt tcaactatgc gtatgagtgt ctggaatact tcaaacttac ggataaggtt       300
     aagctctttt ataatgatta caacacctat atggtagtta acgacgagat caagcttgtg       360
     aactatatta atcagggtaa aaaagtctgc gcc                                    393
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