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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF125882; SV 1; linear; genomic DNA; STD; PRO; 270 BP.
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AC   AF125882;
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DT   11-AUG-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Butyrivibrio fibrisolvens strain A38 xylanase (xynH) gene, partial cds.
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KW   .
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OS   Butyrivibrio fibrisolvens
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
OC   Butyrivibrio.
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RN   [1]
RP   1-270
RX   PUBMED; 10427063.
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   "Distribution and evolution of the xylanase genes xynA and xynB and their
RT   homologues in strains of Butyrivibrio fibrisolvens";
RL   Appl. Environ. Microbiol. 65(8):3660-3667(1999).
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RN   [2]
RP   1-270
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   ;
RL   Submitted (04-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Rumen Biotechnology, CSIRO Tropical Agriculture, Private Bag No 3,
RL   Indooroopilly, QLD 4068, Australia
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DR   StrainInfo; 105039; A 38.
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FH   Key             Location/Qualifiers
FH
FT   source          1..270
FT                   /organism="Butyrivibrio fibrisolvens"
FT                   /strain="A38"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:831"
FT   CDS             <1..>270
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="xynH"
FT                   /product="xylanase"
FT                   /db_xref="GOA:Q9S4P1"
FT                   /db_xref="HSSP:1HIZ"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:Q9S4P1"
FT                   /protein_id="AAD48379.1"
FT                   /translation="MYVKTVMNHVYNSQYGSVVYAWDVCNEILHAQNSGWEAVYGSNKT
FT                   NASYVKKAFNYAYETLEYFKLTDSVKLFYNDYNTYMEVNNVITLV"
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SQ   Sequence 270 BP; 85 A; 59 C; 54 G; 72 T; 0 other;
     gatgtatgtt aagaccgtca tgaaccacgt atacaacagc cagtacggct cagttgttta        60
     tgcatgggac gtttgcaacg agatccttca cgctcagaac tccggttggg aagcagttta       120
     cggcagcaac aagaccaacg cttcttatgt aaagaaggca tttaactacg catatgagac       180
     tcttgagtac ttcaagctca cagattcagt taagcttttt tacaatgatt acaacacata       240
     catggaagtt aacaacgtaa tcacacttgt                                        270
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