spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF125881; SV 1; linear; genomic DNA; STD; PRO; 393 BP.
XX
AC   AF125881;
XX
DT   11-AUG-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Butyrivibrio fibrisolvens strain A38 xylanase (xynD) gene, partial cds.
XX
KW   .
XX
OS   Butyrivibrio fibrisolvens
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
OC   Butyrivibrio.
XX
RN   [1]
RP   1-393
RX   PUBMED; 10427063.
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   "Distribution and evolution of the xylanase genes xynA and xynB and their
RT   homologues in strains of Butyrivibrio fibrisolvens";
RL   Appl. Environ. Microbiol. 65(8):3660-3667(1999).
XX
RN   [2]
RP   1-393
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   ;
RL   Submitted (04-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Rumen Biotechnology, CSIRO Tropical Agriculture, Private Bag No 3,
RL   Indooroopilly, QLD 4068, Australia
XX
DR   StrainInfo; 105039; A 38.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..393
FT                   /organism="Butyrivibrio fibrisolvens"
FT                   /strain="A38"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:831"
FT   CDS             <1..>393
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynD"
FT                   /product="xylanase"
FT                   /db_xref="GOA:Q9S4P2"
FT                   /db_xref="HSSP:1BG4"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:Q9S4P2"
FT                   /protein_id="AAD48378.1"
FT                   /translation="HSQTPSWLFRNGYSGNGGFVNSSTMDKRLEMYVKTVMNHVYNNQY
FT                   GSVVYAWDVCNEILHAQNSGWEAVYGSNKTNATYVKKAFNYAYETLEYFKLTNSVSLFY
FT                   NDYNTYMEVNDVIKLVNYINQGKKVCS"
XX
SQ   Sequence 393 BP; 124 A; 90 C; 80 G; 99 T; 0 other;
     cactcacaga cacctagctg gctcttcaga aacggctatt caggaaacgg cggctttgta        60
     aattcttcca caatggacaa gcgtcttgag atgtatgtta agaccgttat gaaccacgta       120
     tacaacaacc agtacggctc tgttgtttat gcatgggatg tatgtaacga gatccttcac       180
     gctcagaact ccggttggga agcagtttac ggcagcaaca agaccaacgc tacatatgta       240
     aagaaggcat ttaactacgc ttatgagaca cttgagtact tcaagctcac taactcagtt       300
     agcctcttct acaacgatta caacacatac atggaagtaa acgatgtaat caagcttgtt       360
     aactacatca accagggtaa gaaggtttgc tca                                    393
//
spacer
spacer