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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF125880; SV 1; linear; genomic DNA; STD; PRO; 393 BP.
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AC   AF125880;
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DT   11-AUG-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Butyrivibrio fibrisolvens strain A38 xylanase (xynC) gene, partial cds.
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KW   .
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OS   Butyrivibrio fibrisolvens
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
OC   Butyrivibrio.
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RN   [1]
RP   1-393
RX   PUBMED; 10427063.
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   "Distribution and evolution of the xylanase genes xynA and xynB and their
RT   homologues in strains of Butyrivibrio fibrisolvens";
RL   Appl. Environ. Microbiol. 65(8):3660-3667(1999).
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RN   [2]
RP   1-393
RA   Dalrymple B.P., Swadling Y., Layton I., Gobius K.S., Xue G.P.;
RT   ;
RL   Submitted (04-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Rumen Biotechnology, CSIRO Tropical Agriculture, Private Bag No 3,
RL   Indooroopilly, QLD 4068, Australia
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DR   StrainInfo; 105039; A 38.
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FH   Key             Location/Qualifiers
FH
FT   source          1..393
FT                   /organism="Butyrivibrio fibrisolvens"
FT                   /strain="A38"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:831"
FT   CDS             <1..>393
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynC"
FT                   /product="xylanase"
FT                   /db_xref="GOA:Q9S4P3"
FT                   /db_xref="HSSP:1HIZ"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:Q9S4P3"
FT                   /protein_id="AAD48377.1"
FT                   /translation="HSQTPTWFFRNGFNGSGSFVSQSTMDARLEFYIKSVMGHVYSGQY
FT                   GSVVVYWDVANGIMHTSNSGWEAVYGNNKTNATYVKKAFNYAYDVLEQYKLTDKVKLFY
FT                   NDYNTYMVVNDEIKLVNYINQGKKVCA"
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SQ   Sequence 393 BP; 117 A; 94 C; 86 G; 96 T; 0 other;
     cactcacaga ctcctacctg gtttttcaga aacggtttta acggaagcgg cagtttcgta        60
     agtcagagca caatggacgc ccgtcttgag ttctacatta aatccgttat gggacacgtt       120
     tactcaggcc agtacggcag cgttgttgta tactgggatg ttgccaacgg gatcatgcat       180
     accagcaact caggctggga ggcagtttac ggcaacaaca agaccaatgc tacttatgtt       240
     aaaaaagcct tcaactacgc ctatgatgtc cttgagcagt acaaactcac cgacaaggtt       300
     aagctcttct acaatgacta caacacctac atggtagtta acgatgagat caagcttgtt       360
     aattacatca accagggcaa aaaggtctgc gca                                    393
//
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