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EBI DbfetchID AF124851; SV 1; linear; genomic DNA; STD; PRO; 5624 BP. XX AC AF124851; XX DT 21-NOV-2001 (Rel. 69, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Oenococcus oeni arginine deiminase (arcA), catabolic ornithine DE transcarbamylase (arcB), and carbamate kinase (arcC) genes, complete cds. XX KW . XX OS Oenococcus oeni OC Bacteria; Firmicutes; Lactobacillales; Oenococcus. XX RN [1] RP 1-5624 RA Tonon T., Lonvaud-Funel A.; RT "Oenococcus oeni arcA, arcB and arcC genes"; RL Unpublished. XX RN [2] RP 1-5624 RA Tonon T., Lonvaud-Funel A.; RT ; RL Submitted (30-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL LBMA, Faculte d'Oenologie, 351, cours de la Liberation, Talence 33405, RL France XX DR StrainInfo; 14736; ATCC 23279. XX FH Key Location/Qualifiers FH FT source 1..5624 FT /organism="Oenococcus oeni" FT /strain="ATCC 23279" FT /mol_type="genomic DNA" FT /db_xref="taxon:1247" FT CDS 2014..3261 FT /codon_start=1 FT /transl_table=11 FT /gene="arcA" FT /product="arginine deiminase" FT /EC_number="3.5.3.6" FT /note="ADI" FT /db_xref="GOA:Q8VW56" FT /db_xref="HSSP:1RXX" FT /db_xref="InterPro:IPR003198" FT /db_xref="InterPro:IPR003876" FT /db_xref="UniProtKB/TrEMBL:Q8VW56" FT /protein_id="AAL33870.1" FT /translation="MMDKKVPIHVYSEIGKLETVILHRPGHEIENITPDSMRRLLFDDI FT PYLPVAQHEHDVFAETLKKNGAEVLYLEDLVVKALDTGGSEIKDQFVKQMLTESGYASG FT IVHDALKEYLLDFDTKSMVNKIIEGVQKKEVNFVQKGLVSLSEEKNYQFFLDPMPNLYF FT TRDPQASIGEGLSINRMTFQARQRESLFMQTIINYHPRFANKKLHVWRDRNHSTHIEGG FT DELILNDHVLAIGISQRTQADAIEDIAHKLFKDSNYDTIITVLIPHNHAMMHLDTVFTM FT INLNQFTVHPGIMGAGGNIPIFVLHKDKDNQIRIENYHNLEAVLKDQLNLSELDLIPTG FT NGDPIVSAREQWNDGSNTLAIAPGVVVTYDRNYVSNATLKKHGIKVLEVPSSELSRGRG FT GPRCMTMPIYRDDIKK" FT CDS 3278..4333 FT /codon_start=1 FT /transl_table=11 FT /gene="arcB" FT /product="catabolic ornithine transcarbamylase" FT /EC_number="2.1.3.3" FT /note="OTC" FT /db_xref="GOA:Q8VW55" FT /db_xref="InterPro:IPR002292" FT /db_xref="InterPro:IPR006130" FT /db_xref="InterPro:IPR006131" FT /db_xref="InterPro:IPR006132" FT /db_xref="UniProtKB/Swiss-Prot:Q8VW55" FT /protein_id="AAL33871.1" FT /translation="MEQKLGNLVKKNVVNSVFQGRSLLAEKDFTPMELEYLIDFALHLK FT ALKKLGISHRYLEGKNIALLFEKTSTRTRSAFTTASIDLGAHPEFLGSNDIQLGKKESV FT EDTARVLGSMFDGIEFRGFKQSVVDDLARYSGVPVWNGLTDEWHPTQMLADFMTIKENF FT GHIKNINLSYMGDGRNNTANSLLITGSMLGANIRIVSPKELQPSEKTTELAKKFAEKSG FT SRFLITDNIDEGVSKTNVLYTDVWVSMGESDWEDRVKLLKPYQVNMETIRKTSTPDDQL FT IFMHCLPAFHDINTDYGHEIFEKYGIKEMEVTDEVFRSIYARQFEEAENRMHSIKAIMA FT ATLGNLFIPHV" FT CDS 4443..5384 FT /codon_start=1 FT /transl_table=11 FT /gene="arcC" FT /product="carbamate kinase" FT /EC_number="2.7.2.2" FT /note="CK" FT /db_xref="GOA:Q8VW54" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR003964" FT /db_xref="UniProtKB/Swiss-Prot:Q8VW54" FT /protein_id="AAL33872.1" FT /translation="MANRKIVVALGGNAILSKDASAEAQQAALRETAKSLVSLVKENEK FT LIITHGNGPQVGNLLLQQMIGSTKSNPAMPIDTAVSMTEGSIGYWMQNAMDDVLEDEGI FT DKSAATVVTQVEVDANDSAFQNPSKPIGPFYEKEDINKIRELHPEYIYVEDAGRGYRRV FT VPSPKPVNVREYQVINSLVDNNVIPISVGGGGVPVVREGNHLIGCEAVIDKDFASEKLA FT ELIKADLLIILTAVDNVYINFNKPDQKKLENVTVEELENYINENQFAKGSMLPKVQAAI FT NFVNNGCGEAVVTSLKNINNFLQKGSGTIITK" XX SQ Sequence 5624 BP; 1959 A; 779 C; 1060 G; 1826 T; 0 other; atcgataaat taaaaaaagc aaatttttgg atttttggta cagatatgaa aggggcagac 60 tataatgatt ggaatgctga tggtccggta gcaattgtga ttggtaatga gggaaaagga 120 atttcggctc aaaccaaaaa aaaagttgat caaatgctga cgattccaat ggttggtcat 180 gttcaatcat tgaatgctag tgtcgcagcg gctttattga tttaccaggg ttttaacagc 240 cgtcgtttaa aaaataaata aagaatattt ggtatatttt ataaaatatt ttttatcttt 300 aatccatatt tatttcaatt gagtcaaatc gttgatatat gtggattttt ttatctcaaa 360 acaaatattt gatatctttt aaattttaag aacatatgtt cgctatcttt cgaaaataaa 420 gcactataag ctgtttgata aattagtgga ggaaatatga gggccgaatc agctttgaaa 480 atgattaaaa aaggggatca atgggttatt tatttctgaa tagaagaaac cgaaggtttc 540 cttagaaaaa tacataatcg ctatttaaag agtgtattgg attttgacga gtggaagagc 600 gaagccttgg atgtactaat gcgttcggtc gataagtatc aaaataattt cgacagtaaa 660 tttaccactt actatttttc ggctttgcaa cataaagcaa tggatctttt aagaaagact 720 tattcaaaaa aagaacaaag tagacgccag catctttcac ttgataagct ggcaattgat 780 ggttttgatc cagttggcca tagttggaac catgcacaaa caaagctgga ttttgaagat 840 gcgattagcc aaacgaattt tcatagctgc aagcaggaaa atatggccgt tcagcactta 900 tttggcaatg ccgaactatc tgaaaaattg agaaacaaac caaggcacat tctttggatt 960 atcggcaaaa acgtttgatt aatgagacct ataaatattt ttatggttta aaaaatgaca 1020 atgacactgc cgcttaaatc tgttaaaacg cctgcgacat aatttattat tttaagtaat 1080 taaaggaatt aaaaactact tcttaaatta ttttttgtaa tgccaaaaaa gaactaacat 1140 gattatgtaa gcgttcttat tagtaattca tatacagaca atttcgtttc tatgaattag 1200 aaaggctagg ctgtttctta aaatgctttt tgatcaagta gaatctgata tattattaga 1260 aattcatgca tcagaaattt ttaaatcgct aagtaatgat caatttattt ttttgacaaa 1320 aaatatgaag tatcgaactg caaccaaaaa acagattatt tttgaacaag gggacacagc 1380 atggcgtctt ttttttgtta tatctggttt ggttcaagcc actaggattg acgaggatgg 1440 ccaagaatat gttaatttaa tttccgcaca taaattattc cccctttata ggctgttaga 1500 taaaaatttt tattttaatt atacagtcga agctattaca aatatttctt ttgtgacttt 1560 tcaaaggaaa gattttgaac agcttttacg tcaaaataat gaatttgcgt tagggattct 1620 taaacatgtt agcgaatcta tgaatcgtta tgaaaagcaa ctaagtattt ctcttgaaac 1680 taatgcatcc gagcgtatta gaaaaacaat ttcctggctt ttttgtgaat taggtagatc 1740 gaatggccct gaaaatgaat ttattgtaat tccttataaa attccgatat ttttaattgc 1800 caaattatct ggtactactc gtgaaacagc tagcagattt attaatggtt atataaatca 1860 taatcatgat ggagtgattg tcacacattt tcattttgaa aaaaagatgt gataaatatc 1920 acttttttag tgtttatttt aaatataagg gatttctttt tttattctac gataaaactg 1980 tagctcaatg atagttacgg attggagtaa aaaatgatgg ataagaaagt tccaattcat 2040 gtgtattctg aaattggaaa attagaaact gtaattctcc atcgtccagg acatgaaatt 2100 gagaatataa caccagatag tatgcgacgt ttgttatttg atgatattcc atacttacca 2160 gttgctcaac atgagcacga tgtctttgct gaaacattga aaaaaaatgg tgcagaagtt 2220 ttatacctag aagatcttgt agtaaaagcg cttgataccg gtggcagtga gatcaaagat 2280 caatttgtaa aacaaatgtt aacagaatct gggtatgctt caggcatagt tcatgacgct 2340 ttaaaagaat atttgctaga ttttgatacc aaatctatgg ttaataaaat tattgagggt 2400 gttcaaaaaa aggaagttaa ttttgtacaa aaaggcttag ttagtctttc tgaagaaaag 2460 aattatcagt tctttttgga cccgatgccg aatctttatt ttacacgtga tcctcaggcg 2520 tcaattggcg aagggcttag tattaatcgc atgacatttc aggctcgtca gcgtgaatca 2580 ttgtttatgc aaacaattat taattatcat ccgcgttttg caaacaaaaa gttgcatgtg 2640 tggcgcgacc gaaatcactc tactcacatt gaaggtggag acgaacttat tttaaatgat 2700 catgtacttg ctattggaat ttctcaaaga actcaggctg atgctattga agatattgca 2760 cataagttat ttaaagatag caattatgac acgattatta ctgttctaat acctcataat 2820 cacgctatga tgcatttgga tactgttttt acaatgatta atttaaacca gtttacagtt 2880 catccaggaa tcatgggagc tggtggaaat attccaattt ttgttttgca caaggataaa 2940 gataatcaaa taagaattga aaattatcat aatcttgaag cagttttaaa agaccaatta 3000 aatcttagcg aactcgattt aattcccacc ggaaacggag atccaattgt ctctgctagg 3060 gagcagtgga atgatggatc taatacttta gctattgcgc caggtgttgt tgtaacttat 3120 gacaggaact atgtttcgaa tgccacttta aaaaaacacg ggataaaggt tttggaagtt 3180 ccttcaagtg agttgtctcg tggccgtggt ggcccgcgtt gtatgactat gccaatttat 3240 cgtgatgata ttaaaaaata ggaaaggcaa aaattaaatg gaacaaaagt taggaaattt 3300 ggtaaagaaa aatgtagtta attcagtttt tcaaggtaga agtttgttgg ctgaaaaaga 3360 ttttactcct atggaattag aatatttgat agatttcgca ttacatttga aagctttaaa 3420 aaaattggga atatctcata gatacttaga aggaaaaaat atagccttgc tatttgaaaa 3480 gacatctaca cgtacccgct ctgcctttac aactgcctca attgatttgg gtgctcatcc 3540 agaattttta ggctcaaatg atattcaact tgggaaaaag gaatcggtag aagatacagc 3600 aagggtcctt ggatcgatgt ttgatggaat tgaatttaga ggattcaaac aaagtgtagt 3660 tgatgatctt gcaagatatt ctggtgtccc agtctggaat ggcttaactg atgaatggca 3720 tccgactcaa atgttagctg attttatgac aatcaaagaa aacttcggtc atattaaaaa 3780 tattaactta tcttatatgg gagatggacg aaataacaca gctaattctt tacttataac 3840 agggtcaatg cttggagcta atattcgtat tgtttctcca aaagaattac agccatctga 3900 aaaaacaaca gaactagcaa aaaaatttgc tgagaaatct ggttcaagat tcttaattac 3960 agataatatc gatgagggtg tttctaaaac taatgtttta tatacggatg tttgggtttc 4020 gatgggagaa agtgactggg aggatcgagt taaattattg aaaccttatc aggtgaatat 4080 ggagacaata aggaaaactt ctacccctga tgatcaatta atctttatgc attgtttacc 4140 tgcttttcat gatattaata ctgattatgg gcacgaaatt tttgagaaat atggaataaa 4200 agaaatggaa gtgaccgatg aggtttttcg ttctatatac gctcgacagt ttgaagaagc 4260 agaaaatcgt atgcatagta ttaaagctat catggcagct actcttggaa atttgtttat 4320 tccgcatgtt taattaattt gaatatagaa aataatgatt gcgataaaaa ataaagcaaa 4380 aattggcatt ctcaattaac tgtttttgtt aagcaataaa attcaaaggt ggattatgat 4440 ctatggcaaa tagaaaaatt gtggtggcgc ttggtggcaa tgctatctta tccaaagatg 4500 cctcagctga agctcaacag gcagctttac gtgaaacagc aaaatcgtta gtcagtctgg 4560 taaaagaaaa tgaaaaatta attatcactc atggaaatgg tcctcaagtc ggtaatttgc 4620 tattgcaaca aatgattggt agcacaaaaa gtaatcctgc aatgccgatt gatacagctg 4680 tatcaatgac tgaaggaagt ataggctact ggatgcaaaa tgccatggat gacgtattgg 4740 aagacgaagg aattgataaa agtgctgcaa ccgttgtcac acaagttgag gtggatgcaa 4800 atgattctgc ttttcaaaat ccaagtaaac caattggtcc tttctacgaa aaggaagata 4860 ttaataaaat aagggaatta catcccgaat atatctacgt tgaggatgca ggtcgaggtt 4920 accgtagagt tgttccttca cctaaaccag ttaatgttag agaatatcaa gtcattaata 4980 gcttagtaga caataacgtg attccaatct ctgttggtgg aggaggcgtt ccggtcgtta 5040 gagaaggaaa tcatttgatt gggtgcgaag ctgtaattga taaagacttt gcttctgaaa 5100 aattggcaga acttattaaa gctgatttat taattatatt aactgctgtt gataatgttt 5160 atattaattt taataagccg gatcaaaaga aattggaaaa tgtaaccgtt gaagaactcg 5220 aaaattatat taatgaaaac caattcgcaa agggcagcat gctaccgaaa gttcaagctg 5280 caattaattt tgtgaataat ggttgtggag aggctgtggt aacttcgctt aaaaatatta 5340 ataacttttt gcaaaaaggt tcaggaacga ttatcacaaa gtagcttgtt ttctatacat 5400 ttattttata ttgaaaattt ttgcaattgt ttgtttaacg gaatatttaa tatacgtttc 5460 ggtaaaacaa attttagaaa ataaatactt ccaaaccagg attttaatta aacaagcgtt 5520 taaattttct tagatgaata tggatacaat ttttaaataa aacaaatttt taaattatta 5580 agaatattaa atatctttct caaatttagt aatgttagga attc 5624 // |
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