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EBI DbfetchID AF117715; SV 1; linear; genomic DNA; STD; PRO; 5658 BP. XX AC AF117715; XX DT 26-AUG-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Legionella pneumophila NAD-malate oxidoreductase homolog (sfcA) gene, DE partial cds; survival protein homolog (surE), novel lipoprotein homolog DE (nlpD), stationary phase specific sigma factor homolog (rpoS), and DE homogentisate 1,2-dioxygenase (hmgA) genes, complete cds; YebC (yebC) gene, DE partial cds; and unknown gene. XX KW . XX OS Legionella pneumophila OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. XX RN [1] RP 1-5658 RX PUBMED; 10438758. RA Hales L.M., Shuman H.A.; RT "The Legionella pneumophila rpoS gene is required for growth within RT Acanthamoeba castellanii"; RL J. Bacteriol. 181(16):4879-4889(1999). XX RN [2] RP 1-5658 RA Hales L.M., Shuman H.A.; RT ; RL Submitted (04-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL Microbiology, Columbia University, 701 West 168th Street, New York, NY RL 10032, USA XX FH Key Location/Qualifiers FH FT source 1..5658 FT /organism="Legionella pneumophila" FT /strain="Philadelphia-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:446" FT CDS complement(<1..352) FT /codon_start=1 FT /transl_table=11 FT /gene="sfcA" FT /product="NAD-malate oxidoreductase homolog" FT /note="SfcA; predicted location: cytoplasm" FT /db_xref="GOA:Q9S4T5" FT /db_xref="HSSP:1PJ3" FT /db_xref="InterPro:IPR012301" FT /db_xref="UniProtKB/TrEMBL:Q9S4T5" FT /protein_id="AAD51392.1" FT /translation="MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKD FT FGLLGKLPHRVETLDEQVKRAYLQYSSYTTRLQQHIYLNNLHDKNQIVFYKLLSRHLGE FT MLPIIYTPIVGAA" FT CDS 432..815 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="OrfA; predicted location: inner membrane; contains FT one proposed transmembrane segment" FT /db_xref="UniProtKB/TrEMBL:Q9S4T4" FT /protein_id="AAD51393.1" FT /translation="MNKYLVIILITLGLVSCQFKKDESYYRSHPSELQNALKLCPGTQP FT DGLSCQQLEAIGRRMNGLAYQLQYNPQEFGNKILALQEVIANQQREIQSKKDNAELQDS FT LKRNQEDLAYYLAVVKWLESPES" FT CDS 818..1573 FT /codon_start=1 FT /transl_table=11 FT /gene="surE" FT /product="survival protein homolog" FT /note="may function in stationary phase survival; predicted FT location: cytoplasm" FT /db_xref="GOA:Q9S4T3" FT /db_xref="HSSP:1J9L" FT /db_xref="InterPro:IPR002828" FT /db_xref="UniProtKB/Swiss-Prot:Q9S4T3" FT /protein_id="AAD51394.1" FT /translation="MKILVSNDDGVLAPGIKILANELSTLGEVKVVAPDRNRSGASNSL FT TLTQPLRVKQLDNGYYSVDGTPTDCVHLALTGFLEPTDIVVSGINEGANLGDDVLYSGT FT VAAAMEGRYLGLPAIAISMVGDNIQHYETAAIIAKQLVIKLSANKLPSQTILNVNVPDL FT PLNQIRGLQVTRLGTRHSAEPIIKEYDPRGRPIYWVGPPGIEADAGAGTDFFAIKTGHV FT SITPLHLDMTHYKLFDHLSNLLNEICIEN" FT CDS 1592..2335 FT /codon_start=1 FT /transl_table=11 FT /gene="nlpD" FT /product="novel lipoprotein homolog" FT /note="predicted location: outer or inner membrane; may FT function in cell wall formation" FT /db_xref="GOA:Q9S4T2" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q9S4T2" FT /protein_id="AAD51395.1" FT /translation="MMRLFRKQLICIFFILSAAGCGTRSDLAPVTELKWQPYSKYQKFH FT TVRSGETLYAIAFRYDTDYRRLAINNHLRPPYSLRVGQVLSLKGIVPKSNHFHSAPRAN FT LHITHKPKQKTIYSPAYNVRSSSGWLWPVTGRVVTTFIPSQGKKGINIACNRGDKVRAS FT ASGVVAYAGSGLAGYGNLIIIKHSNEYLTAYGNNARNLVTEGQRVNAGQVIAEAGLIDR FT SYWGVHFEIRRAGVPVNPLNYLQKG" FT CDS 2421..3446 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoS" FT /product="stationary phase specific sigma factor homolog" FT /function="control of stationary phase and stress regulated FT genes" FT /note="proposed location: cytoplasm" FT /db_xref="GOA:Q9S4T1" FT /db_xref="HSSP:1KU2" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q9S4T1" FT /protein_id="AAD51396.1" FT /translation="MQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEELDE FT LPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGFSPLLTAEEEIHYATLALKGDMEAR FT KKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYATWWI FT RQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDV FT QKLLGLNDKVASVDTPIGFDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTE FT NQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQVEALKTLRTLLERVGLTQEDL FT F" FT CDS complement(3549..4577) FT /codon_start=1 FT /transl_table=11 FT /gene="hmgA" FT /product="homogentisate 1,2-dioxygenase" FT /note="predicted location: cytoplasm; may function in FT phenylalanine metabolism" FT /db_xref="GOA:Q9S4T0" FT /db_xref="HSSP:1EYB" FT /db_xref="InterPro:IPR005708" FT /db_xref="UniProtKB/Swiss-Prot:Q9S4T0" FT /protein_id="AAD51397.1" FT /translation="MQPFVDELSPNAMRWSPLYNSSQIKCDFVEGLFHIAGSPLVNTYT FT YYCNHSMSDKYFANNDGELLFVPYAGEIHLHTEFGKLMLSSGSIAVIPRGVKFKVEVIS FT KEAKGYLCENSGNPLTLPQLGPIGANGLANPRHFQYPVAAFENSGSEHTIICKNQKKLW FT FTVCNHSPLNVVAWHGNYAPYCYDLSLFNTINTVSFDHPDPSIFTVLTSESEIPGVSNL FT DFVIFPPRWMVAEHTFRPPYFHRNYMNELMGLVYGEYDAKKEGFIPGGISIHNCMTPHG FT PDYESYEIAASQDLKPNYINSLAFMFETKDYWQVTEQAYRHPSRQMDYLNCWQGFKIEF FT SQ" FT CDS 4945..>5658 FT /codon_start=1 FT /transl_table=11 FT /gene="yebC" FT /product="YebC" FT /note="predicted location: cytoplasm" FT /db_xref="HSSP:1KON" FT /db_xref="InterPro:IPR002876" FT /db_xref="UniProtKB/TrEMBL:Q9S4S9" FT /protein_id="AAD51398.1" FT /translation="MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESS FT NPRLRDAVKKALNANMKRDTIDNAVKRGVGGVDGEAMIAMRYEGYGPGGVAILVDCLSD FT NKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDV FT AVEDGQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDM FT LEDLDDVQEVYSNAEF" XX SQ Sequence 5658 BP; 1769 A; 960 C; 1251 G; 1678 T; 0 other; ctgcagcacc aacgattggt gtatagatga tgggaagcat ttcccccaaa tgacgactta 60 gcagtttgta aaatactatt tggtttttat catgtaaatt attcaaataa atatgttgct 120 gcaaacgtgt cgtgtaactt gaatattgaa gataggcacg ttttacttgt tcatcaagag 180 tttctacgcg gtgtggtaac ttgcctaaaa gaccgaaatc ttttctttct tcctgagtaa 240 atgctgttcc tttgtttaat tgcggtgtag tcagtaaagg cttcccacat aatgaggttt 300 ctatgtataa ctcgcccgtt tggggatcac gattcaaact aaaatcaagc atatggtatt 360 ctcataagat agcgttactt gctgactggt gataatatcg actttttgta gtttacatca 420 agagggcggg tatgaataag tacttagtga taatattaat aactttggga ttggtttcat 480 gtcagtttaa aaaagacgaa tcctattatc gttcccaccc atccgaactg caaaatgctt 540 taaaattgtg ccctggcacg caacccgatg gattgagttg ccagcaactg gaggcaattg 600 gcaggaggat gaatggtctt gcttatcaac tacaatacaa tccacaagag tttggtaaca 660 aaattttggc tttgcaggag gttattgcca atcagcaacg ggaaatacag agtaaaaagg 720 ataacgctga attacaagat tcattgaaaa gaaatcaaga agatcttgct tactatttag 780 cagttgtaaa atggttagaa tcccctgaga gttaaacatg aaaatattag taagcaatga 840 cgacggggtt ttggcgcccg gtatcaaaat tttagctaat gagctgtcca ctttaggaga 900 agttaaagtg gttgcgcctg atagaaatag aagtggcgcc agtaactctt tgactttaac 960 acaaccttta agagttaaac aattggacaa tggttattat agtgtggatg gaacacctac 1020 tgattgcgtc catctggcgt taaccggatt tttagagcct acagacatag ttgtttcagg 1080 gattaatgag ggtgccaatt taggggatga tgtactttac tcaggtacag tggcagcggc 1140 tatggaaggt cgttatttag ggttgcctgc tattgcaatc tcaatggtag gggacaacat 1200 acaacattat gaaacagctg caattattgc caaacaattg gttataaaat taagtgctaa 1260 caaattacct tctcaaacta tattaaatgt taatgttcct gatttacctt tgaatcaaat 1320 aagaggattg caggttacgc gattgggaac tcgccatagc gctgagccta ttattaaaga 1380 atatgatccc agaggaaggc caatttattg ggttggtcca ccgggtatag aagcagatgc 1440 tggtgctggt actgattttt ttgcaattaa aacaggtcat gtttcgataa caccgcttca 1500 tttagacatg actcattata agctatttga tcatttatct aacttactta acgaaatttg 1560 catagaaaat taataaataa taaatgagat aatgatgcgc ctatttcgca aacaattaat 1620 ttgtattttt tttatcttaa gtgctgctgg ttgtgggaca agaagtgatt tggctcctgt 1680 taccgagcta aaatggcagc cttattcaaa atatcagaaa ttccatacgg tgcgatcagg 1740 tgagaccctt tatgctatag catttcgtta tgatactgat tataggcggc ttgcgatcaa 1800 caatcaccta aggccacctt attctttgcg agtaggacaa gttttaagtt taaaaggcat 1860 cgtgccaaaa tcaaatcact ttcattcagc tcccagagct aacttacata ttacccataa 1920 gccaaaacaa aaaactattt attctccagc ttataatgta cgttcttcct ctggttggct 1980 atggccagtt actggtcgtg ttgttacaac attcattcct tctcagggga aaaaaggcat 2040 aaatattgca tgtaacagag gagacaaagt tagagcttca gcgagtggag ttgtggctta 2100 tgctggcagc ggtttggctg ggtatggtaa tttaattatc attaaacaca gtaatgaata 2160 tttaactgca tacggcaaca atgccagaaa cctggtgaca gaaggacagc gcgttaatgc 2220 agggcaggta atagcagaag ctgggttaat agatagatca tactggggtg tgcattttga 2280 aattagaaga gcaggggtgc cagttaatcc attgaattat ctacaaaaag gttgacatat 2340 aactcatagt tatagcaaca ataggcttgt taagaagtaa aaaactattt caaggcatag 2400 ctaaacatat aggtgataca atgcaagatg atgaagagcc aattaaggac aaggaattta 2460 aagaagagga atggtctgag ccagatgatg aatctctgtt gtcagaagaa gatgttgaac 2520 ctgatatcga aaaaatggaa gaagagcttg atgaacttcc agagtttact gatgatgaaa 2580 cttttccttc attccagcgc gggaaaaata ttgccaaggc tttagatgcg actcaacttt 2640 acttgggtga aattggtttt tctcctttgt taacggctga agaagaaatc cattatgcga 2700 ctcttgcttt aaaaggtgat atggaagcac gcaagaaaat gattgagtcg aatttgcgcc 2760 tggtggttaa aatagccaga cgttatctta atagaggatt gcctcttctt gatctaatcg 2820 aagagggtaa cctgggttta atgaagtctg ttgagaaatt tgaccccaag cgaggattcc 2880 gtttttcaac ttatgcgacc tggtggatta ggcaaactat tgagcgcgca attatgaatc 2940 aaacgagaac tatccgtttg cctattcatg tcgtgaaaga acttaatgtt tatctcagag 3000 cggcaaggca attgacgcaa aaactggatc atgaaccatc acctgaagaa atagcagaaa 3060 tggtggataa gcctttggag gatgtccaaa aattattggg attgaatgat aaagtcgctt 3120 cagttgatac tccaattgga tttgatgaaa ccaaatcttt attagataca attgctgatg 3180 aaaacagttt aaatcctgca gagctgctaa ccaatgagaa tttaaggcag catatagaat 3240 ctcttctgga taaattaact gagaatcaac agcaggttat cgcaagacgt tttgggttaa 3300 gaggttttga aaaagcgaca ctggaagacg ttggtaagga aattgatttg acccgagaac 3360 gcgttcgcca aattcaagtt gaagcgttga agacacttag aactttgtta gagcgggttg 3420 gactaacaca agaggatttg ttttgattta accagttaat taattacaca caagttgggt 3480 caaatttgac ccaactgaaa ccaaattaat taattaccgt caattttaca tcttaaaaag 3540 cagtcaattt attgactaaa ctctatttta aagccttgcc aacaattaag ataatccatt 3600 tgcctactgg gatgtcgata ggcttgctca gttacttgcc agtagtcttt ggtttcaaac 3660 ataaaggcta gggagttgat gtaatttggt tttagatcct gcgacgctgc aatttcgtaa 3720 gattcataat caggtccgtg tggagtcatg caattatgga tgctgatacc acccggtatg 3780 aatccttcct tcttggcgtc atattcacca tagacaagtc ccatcagttc attcatgtag 3840 tttctatgaa aataaggcgg tctaaaagta tgttcggcaa ccatccagcg aggtgggaaa 3900 ataacaaagt ccaagttaga aacaccgggt atttcgcttt ctgaagttaa tacagtgaat 3960 atggaaggat cagggtgatc aaaactgact gtgttaattg tattgaacaa actgagatca 4020 taacaatatg gtgcataatt gccatgccag gcgacgacat ttaaaggaga gtggttgcat 4080 acagtaaacc ataatttttt ctggttttta cagattatag tatgctcgct gccagagttt 4140 tcaaatgcgg ctactggata ttgaaaatgt cttgggtttg ccaaaccatt ggctccaatg 4200 gggcctaact gaggtaaggt taagggattt ccgctatttt cacaaagata accttttgcc 4260 tccttgctga ttacttccac tttaaattta acgccacgag gtatcaccgc gatcgatccg 4320 gaagagagca ttaatttgcc aaattcagta tgcagatgaa tctcgcctgc atagggaaca 4380 aataataact caccatcatt attggcgaaa tatttatcgc tcatggagtg gttgcaataa 4440 taagtatagg tattaactaa cgggctaccg gcaatatgaa atagtccttc aacaaaatca 4500 catttaattt gagagctgtt ataaagaggt gaccaacgca tggcattggg tgacaactca 4560 tcaacaaaag gttgcataat attaaactca taggggtaat acgtgccctg ggtaacagta 4620 ggaagtattc tatatagcca acttcgaaga ttattatgtc ggggacgagt gaatgcggtt 4680 ccacttaatt gttctgcgta aagtcctaag ctacagtgtt gcggtgagtt ttgatttggg 4740 ggtagtgctc ctttaacagc ctcgctgtgg tgataattac caaatccttg caaatacaca 4800 gttcaatctc cttcaagatt tttgatggtg ctagcatagt ccaaaaaagt tcaaattgtc 4860 gagagcatcg atggctttag tcattctttt tggtgttaga gcattgtata atctccaaat 4920 aaaaattcat ttagaggtga tgtaatggct ggtcatagta aatgggctaa tatcaaattc 4980 cgtaaaggtg ttcaggatgc caaaagagga aaaatattta ctaaattaat tcgtgaaatt 5040 actgtagctg cccgtatggg gggaggagat gagtcaagta atccacgctt gagagatgct 5100 gttaaaaagg ctctgaatgc taatatgaag cgtgatacca tagataatgc tgtcaagcga 5160 ggggtagggg gagttgatgg tgaggctatg atagccatgc gttatgaagg ttacgggcca 5220 ggtggtgttg ctatactggt agattgtttg tctgacaata aaaatcgaac cgtatcggaa 5280 gttcgacatg ctttttcaaa acatgggggt aatttaggca ctgatggttc agtatcctat 5340 cttttcacta atcaaggtga aattctcatg gcttctaatc agccagaaga taaagtgatg 5400 gagattgcaa tcgatgctgg cgcttctgat gttgctgtag aagatggtca gatagagatc 5460 attacccctg tagaagctta tcacaccgtc ttaaatgctt tacaggatgc cggtttggag 5520 gttgagcagt ctcatttaac tatgcgtgca caaaccttgg ttccaattaa tgatgaaacg 5580 gctgaaagtt taattaaact gattgacatg ctggaggatt tggatgacgt acaagaagtt 5640 tacagcaatg ctgaattc 5658 // |
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