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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF114040; SV 1; linear; genomic DNA; STD; PRO; 1547 BP.
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AC   AF114040;
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DT   02-JAN-2000 (Rel. 62, Created)
DT   02-JAN-2000 (Rel. 62, Last updated, Version 1)
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DE   Vibrio halioticoli alginate lyase AlyVGIII gene, complete cds.
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KW   .
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OS   Vibrio halioticoli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
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RN   [1]
RP   1-1547
RA   Sugimura I., Sawabe T., Ezura Y.;
RT   "Cloning and expression of alginate lyase genes of Vibrio halioticoli";
RL   Unpublished.
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RN   [2]
RP   1-1547
RA   Sugimura I.;
RT   ;
RL   Submitted (17-DEC-1998) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Microbiology, Hokkaido University, 3-1-1 Minato-cho, Hakodate
RL   041-8611, Japan
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FH   Key             Location/Qualifiers
FH
FT   source          1..1547
FT                   /organism="Vibrio halioticoli"
FT                   /strain="IAM14596T"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:71388"
FT   CDS             563..1270
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alginate lyase AlyVGIII"
FT                   /db_xref="GOA:Q9RGQ2"
FT                   /db_xref="InterPro:IPR009331"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RGQ2"
FT                   /protein_id="AAF22513.1"
FT                   /translation="MIKKHQITLFIVATVVAVSANAASVDYRQEYKHNDKSYASRVKVG
FT                   SSVGHHFFSLEAKQTGKPISDWQAADNEFVYGYNFKVNKKWRITPSMPITFGNDRVTYK
FT                   PQVRVQYKFDSGLTSKLRYRHEFRNYTGDKSDKDSIDRSKITGNLDYKVGALQLGFEAN
FT                   YAEDFFHDNEWFGGKSAKRHNEWDYNVKIGYKETDWDWRPYIELGNVQYSNGPSVTNSN
FT                   RQLRTRVGLTYSF"
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SQ   Sequence 1547 BP; 509 A; 330 C; 273 G; 435 T; 0 other;
     ttaggcaccg caaaatcagg cactgatttt tcttaccaaa ttgacgtaaa tagccaaggt        60
     gtggttttag aagctgcagg tgttagaaaa agctttaatt ggggtataaa cattgaaaat       120
     acgggtcacg cccttactcc aaactgggca aacagtagca acaaatttta tttcaaagcg       180
     ggcatttacc ctcaaatcag ccctagttct agctatgcag gccaagtgtt tgacgtgagc       240
     tttagtaaaa ttgctatcga gcataaataa gcaagcatct cttatatctc catcaaagcg       300
     acctctccgg tcgctttttt atgcctgtcg gatacacgct aagaagcatt cgcttgtatt       360
     gattttatta atatgcatgc acacaaactc atttaaataa aatgatgtat tttcacccta       420
     ctcatctcca ctctcaatta cattactaaa taaatatgca aaatcgcgga taaaaataat       480
     gacaagctgt ttgctatcag cgtattatcg cgactttatt ttattcgtca taccgtaaga       540
     caaaattaca gatttatgaa aaatgattaa aaagcaccag ataacgttat tcattgtagc       600
     taccgtggtc gctgtatctg caaacgctgc ctcagtagac taccgtcaag aatataaaca       660
     caatgataaa tcctatgcta gccgtgtcaa agttggcagc agcgttggcc atcacttctt       720
     tagccttgaa gctaaacaaa ccggtaaacc gatttcagat tggcaagcgg cagataatga       780
     atttgtctat ggctataact tcaaagtgaa taaaaaatgg cgcatcaccc catcaatgcc       840
     aatcacattc ggcaatgatc gcgtcactta caaaccgcaa gttcgtgtgc aatacaaatt       900
     tgattcgggt ttaaccagta aacttcgtta ccgacatgaa tttcgcaact acactggcga       960
     caaatcagat aaagactcta ttgatcgcag taaaatcact ggcaacttag actataaagt      1020
     tggtgcattg caattgggat ttgaagctaa ctatgcagaa gatttctttc atgacaatga      1080
     atggtttggt ggtaaatcag cgaaacgtca caatgaatgg gattacaacg ttaaaattgg      1140
     ctacaaagaa accgattggg attggagacc ttacatagag ctaggcaatg ttcaatacag      1200
     caacggacct agtgtcacta acagtaaccg ccaattacgc acccgtgtag gtctaactta      1260
     tagcttttaa acacacaata tttacagcta accatatttg ataggtctta ctagtaacca      1320
     gtacggccta tcactactgc ccattattgg ccccttattt gataatagtt gataggtgat      1380
     tttcaaaacc aacacagtgc gaatacaccc tccctcccct ggaaaaacaa agctgtgaga      1440
     tgcatcacta aatcctccgc atactcatca agctttatat taaaacacct aaattcagtt      1500
     cgattacccg cacataactg aaggtttagc tatttttatg caagtta                    1547
//
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