EBI Dbfetch

ID   AF114039; SV 1; linear; genomic DNA; STD; PRO; 1388 BP.
XX
AC   AF114039;
XX
DT   02-JAN-2000 (Rel. 62, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Vibrio halioticoli alginate lyase AlyVGI gene, complete cds.
XX
KW   .
XX
OS   Vibrio halioticoli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
XX
RN   [1]
RP   1-1388
RA   Sugimura I., Sawabe T., Ezura Y.;
RT   "Cloning and expression of alginate lyase genes of Vibrio halioticoli";
RL   Unpublished.
XX
RN   [2]
RP   1-1388
RA   Sugimura I.;
RT   ;
RL   Submitted (17-DEC-1998) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Microbiology, Hokkaido University, 3-1-1 Minato-cho, Hakodate
RL   041-8611, Japan
XX
DR   StrainInfo; 47749; IAM 14596.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1388
FT                   /organism="Vibrio halioticoli"
FT                   /strain="IAM14596T"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:71388"
FT   CDS             269..1327
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alginate lyase AlyVGI"
FT                   /db_xref="GOA:Q9RGQ3"
FT                   /db_xref="HSSP:1BAN"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="InterPro:IPR014895"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RGQ3"
FT                   /protein_id="AAF22512.1"
FT                   /translation="MHTKNKIAAVVVSALVAGLAGCSTASSPDTASATPANQDPQLAAQ
FT                   YNLDVTKAPAENFDLSKFKLNLPMDDDKAERAGKVMEIYKSMLNNKEKPFSQAQWFYTD
FT                   QTTGAMVFKAPNKAMTTPNSKNARSELRAMLADDYSSPKNNFTVASTKDAEKYGAIGGH
FT                   MSATLAVDWVSTSGNYKKGGAFATVIGQIHGSKNEPLKIEYRKLPEHEYGSVYWNYETN
FT                   AKGDEYKFRHDISTDVFGQHDLRKGSAEPVDGIKLGDIFSYDVNVKGDIMHLTFTKNPG
FT                   QPNQEVKEFDVNLAKGHLKGDKYDQGYANDWMYFKAGNYNQCNTGSAGCSNNGLEAGDY
FT                   AQVSFYKLNLDQ"
XX
SQ   Sequence 1388 BP; 451 A; 286 C; 286 G; 365 T; 0 other;
     ctagcggtgt tctcggtgta ctcgacaatg aagatgaaaa agaaaaaaca aatgcaggtc        60
     gatactgatt aagtgagttt ttaatcgttt tgttgtcgat aaccgaaaag taagattgta       120
     gataattcag gcgtaattgt ttcaatttgt gatcttcgca tctatattgt aatactatat       180
     taatgtattg ttttatcatg tttattgctg gccacgagaa gttttctcgt ggccagcaat       240
     gctataaata aaaatcttag aggttaaaat gcatacaaaa aataagattg ctgctgttgt       300
     tgtttcagcg cttgtcgctg gcctagcagg ttgttctaca gcttcttctc ctgatactgc       360
     atcagccaca ccggctaacc aagatccgca acttgcggct caatacaact tggacgtaac       420
     caaagctcct gctgagaact ttgacctatc taagtttaaa ctaaacctgc ctatggatga       480
     tgataaggct gaacgcgctg gcaaagtaat ggaaatttac aagtcaatgc taaacaacaa       540
     agagaagcct ttctctcaag cgcagtggtt ctacactgac caaactacag gtgcaatggt       600
     gttcaaagct cctaacaaag caatgacaac acctaactct aagaatgcac gtagcgaact       660
     tcgtgcaatg ctggctgacg attactcatc acctaagaac aacttcactg ttgcgtctac       720
     taaagatgca gaaaaatacg gtgcgattgg cggtcacatg agcgcaactc ttgcagttga       780
     ttgggtaagt acaagcggta actacaaaaa aggtggcgca ttcgcgaccg ttatcggtca       840
     aatccacggt tctaaaaatg aacctctaaa aatcgaatac cgtaaactac ctgagcacga       900
     atacggctct gtttactgga actacgaaac aaatgctaaa ggtgatgaat ataaattccg       960
     tcacgacatc agcactgacg tattcggtca acacgaccta cgtaaaggtt ctgcagaacc      1020
     tgttgatggc atcaaacttg gtgatatctt ctcttacgac gtaaacgtta aaggtgacat      1080
     catgcaccta acatttacta aaaacccagg tcagccaaac caagaagtta aagagtttga      1140
     cgttaaccta gctaaaggtc acctaaaagg cgacaaatac gaccaaggtt atgcaaatga      1200
     ctggatgtac tttaaagcag gtaactacaa ccaatgtaat actggttcag caggttgttc      1260
     aaacaacggc cttgaagcag gcgattacgc tcaagttagc ttttacaagc taaacctaga      1320
     ccaataatat tggtttagtg gcgttattga gtaatgccaa ccaaacaagt caagatgtct      1380
     ggtggggg                                                               1388
//