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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF114038; SV 1; linear; genomic DNA; STD; PRO; 1118 BP.
XX
AC   AF114038;
XX
DT   02-JAN-2000 (Rel. 62, Created)
DT   02-JAN-2000 (Rel. 62, Last updated, Version 1)
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DE   Vibrio halioticoli alginate lyase AlyVMI gene, complete cds.
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KW   .
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OS   Vibrio halioticoli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
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RN   [1]
RP   1-1118
RA   Sugimura I., Sawabe T., Ezura Y.;
RT   "Cloning and expression of alginate lyase genes of Vibrio halioticoli";
RL   Unpublished.
XX
RN   [2]
RP   1-1118
RA   Sugimura I.;
RT   ;
RL   Submitted (17-DEC-1998) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Microbiology, Hokkaido University, 3-1-1 Minato-cho, Hakodate
RL   041-8611, Japan
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FH   Key             Location/Qualifiers
FH
FT   source          1..1118
FT                   /organism="Vibrio halioticoli"
FT                   /strain="IAM14596T"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:71388"
FT   CDS             191..811
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alginate lyase AlyVMI"
FT                   /db_xref="GOA:Q9RGQ4"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RGQ4"
FT                   /protein_id="AAF22511.1"
FT                   /translation="MFCSLILNISALSLKRVNVISNLPFSLNVACTNTSTHSSVMSDQS
FT                   VSMEVFIKPCAVTVFIKACTISHLQLITCTVFLSPRERNNRLIVITIGVVVTFVTGFYL
FT                   KKMAKLTRKLKLAAYFKFPAILKCLTLKRQCFLWGIYRRSLFRYVVYHLHLCLYLGHHL
FT                   GELKRQNGYQLSYRYLQEYGQHFDDCQHIGLEIQLTLRRRHFQ"
XX
SQ   Sequence 1118 BP; 301 A; 238 C; 200 G; 379 T; 0 other;
     aatcattaac ggctttttca tgctaattga taaaatagct tactgcgcta tcttaccttt        60
     tgtaatagat aaatcagcaa acctaacacg ttcttcatca gcgcgaaggc tgtcggtttc       120
     aacaattgag cggtaaattc cccacttagg acgagcaaaa tcatcatcac taaagccgcg       180
     ccacatatct atgttttgct cgcttatatt aaatatctct gcattatcgc ttaagcgcgt       240
     taatgtcata tcaaacttgc cattttcact aaatgtagct tgtacaaata cctcgaccca       300
     ttcatctgta atgagtgacc agtcggtttc aatggaggtt tttatcaagc cctgtgctgt       360
     taccgttttc atcaaagcct gcactatatc gcacttgcag ttgattacct gtactgtttt       420
     tttgagcccc agagagcgta ataataggct gatcgtcatt accattggtg ttgtcgttac       480
     tttcgttacg ggcttttatt tgaaaaaaat ggctaaactt actcgtaagc tcaagctcgc       540
     tgcttacttt aaatttccag ctatattgaa atgtctcacc ctcaaacgcc agtgtttctt       600
     gtgggggatt tatcgtaggt ctttatttcg ttacgttgtc tatcacttgc acctttgtct       660
     ttatcttggt catcatctcg gtgagctaaa aagacaaaat ggttaccaat tatcgtatcg       720
     gtatcttcaa gaatatggac aacactttga tgattgccag catataggtc tggagattca       780
     attgaccctt cgccgaaggc attttcaata agtgtgtatg cgtcaagccc cgaattaacg       840
     ccatctgatt gcaataaaac gtgtgatatt ttctcaaagc catcagcttg agctattggt       900
     gcacctacaa ttgttatgat aatttgtgcg ctagtaccat ctacagagtt tactgttatt       960
     gtatcttgta gtgtttcacc ttcacttaaa gatgttattg atgcgtttaa atcgtcaagt      1020
     gtgtatgacc aatctccacc agcatttaag ctaaaaaaac catagcttgt agcgctattt      1080
     tcttgtgcta caaaagcagc ttcacctgat tgttgatc                              1118
//
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