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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF114037; SV 1; linear; genomic DNA; STD; PRO; 1246 BP.
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AC   AF114037;
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DT   02-JAN-2000 (Rel. 62, Created)
DT   02-JAN-2000 (Rel. 62, Last updated, Version 1)
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DE   Vibrio halioticoli alginate lyase AlyVGII gene, complete cds.
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KW   .
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OS   Vibrio halioticoli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
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RN   [1]
RP   1-1246
RA   Sugimura I., Sawabe T., Ezura Y.;
RT   "Cloning and expression of alginate lyase genes of Vibrio halioticoli";
RL   Unpublished.
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RN   [2]
RP   1-1246
RA   Sugimura I.;
RT   ;
RL   Submitted (17-DEC-1998) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Microbiology, Hokkaido University, 3-1-1 Minato-cho, Hakodate
RL   041-8611, Japan
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DR   StrainInfo; 47749; IAM 14596.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1246
FT                   /organism="Vibrio halioticoli"
FT                   /strain="IAM14596T"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:71388"
FT   CDS             117..1112
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alginate lyase AlyVGII"
FT                   /db_xref="GOA:Q9RGQ5"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="InterPro:IPR014895"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RGQ5"
FT                   /protein_id="AAF22510.1"
FT                   /translation="MKKLAYAVAPLFLAMALAGCGGSDSNSSSSDNSTPDIGNGGSDID
FT                   NGNGGSDNGDNGQAETNAGWDINQWKITLPVSYTYYKEHYGEGNLKDDDSAAELIPADC
FT                   SGKNELTTDTRLPYFYIDANNRTHFIVDLGDDGITTTTNSNYARSELRELYNFNSSDRC
FT                   SSSNQNWAINDSANHKLNATLNVERYPSGINKDPKVGYWVKFMVYEIKQALIKLLWEGP
FT                   NKPVRAIMNDSFLPNNQVCNSCNSFSVDLGTAKSGTDFSYQIDVNSQGVVLEAAGVRKS
FT                   FNWGINIENTGHALTPNWANSSNKFYFKAGIYPQISPSSSYAGQVFDVSL"
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SQ   Sequence 1246 BP; 405 A; 239 C; 246 G; 356 T; 0 other;
     atccaaaatc acttacttaa acttgagtcg agtcacaaag ctgaacacct taacttacat        60
     atgtatgaca atatgattag aatatttaga agtatttaga attaaggtat atcaatatga       120
     agaagctggc ctacgcagtt gcaccacttt ttttggcaat ggcattagca ggatgtggag       180
     gttctgactc aaactctagt agttctgata atagcactcc tgacattggc aatggcggtt       240
     cagatattga caatggtaac ggtggttctg ataacggtga caacggccaa gctgaaacaa       300
     atgcaggttg ggatattaat cagtggaaaa ttaccctacc tgttagttat acctactata       360
     aagaacacta tggtgaaggt aatcttaaag atgatgatag cgctgcagaa ctaatcccag       420
     cagattgtag tggcaaaaac gaactcacaa ctgacaccag attgccttac ttctatattg       480
     atgcaaacaa cagaactcac tttattgttg atcttggcga tgatggcatc actacaacaa       540
     caaatagtaa ctatgctcgc tcagaattgc gtgaactcta caactttaat agttcagatc       600
     gctgttcatc tagcaatcaa aactgggcta ttaatgacag tgctaatcat aaacttaacg       660
     ccactctaaa tgttgaaagg taccctagcg gcatcaataa agatcctaag gttggttatt       720
     gggtcaagtt catggtttat gaaatcaaac aagcactgat caaattactg tgggaagggc       780
     ctaataagcc agttcgcgca attatgaatg atagtttctt gccaaacaat caagtatgta       840
     atagctgtaa ttcgtttagt gttgacttag gcaccgcaaa atcaggcact gatttttctt       900
     accaaattga cgtaaatagc caaggtgtgg ttttagaagc tgcaggtgtt agaaaaagct       960
     ttaattgggg tataaacatt gaaaatacgg gtcacgccct tactccaaac tgggcaaaca      1020
     gtagcaacaa attttatttc aaagcgggca tttaccctca aatcagccct agttctagct      1080
     atgcaggcca agtgtttgac gtgagccttt agtaaaattg ctatcgagca taaataagca      1140
     agcatctctt atatctccat caaagcgacc tctccggtcg cttttttatg cctgtcggat      1200
     acacgctaag aagcattcgc aagtattgat tttattaata tgcatg                     1246
//
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