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EBI DbfetchID AF109131; SV 1; linear; genomic DNA; STD; PRO; 3256 BP. XX AC AF109131; XX DT 13-MAY-1999 (Rel. 59, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Sinorhizobium meliloti homogentisate dioxygenase (hmgA) and DE maleylacetoacetate isomerase (maiA) genes, complete cds; and unknown gene. XX KW . XX OS Sinorhizobium meliloti OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; OC Sinorhizobium/Ensifer group; Sinorhizobium. XX RN [1] RP 1-3256 RX PUBMED; 10220173. RA Milcamps A., de Bruijn F.J.; RT "Identification of a novel nutrient-deprivation-induced Sinorhizobium RT meliloti gene (hmgA) involved in the degradation of tyrosine"; RL Microbiology (Reading, Engl.) 145(Pt 4):935-947(1999). XX RN [2] RP 1-3256 RA Milcamps A., de Bruijn F.J.; RT ; RL Submitted (23-NOV-1998) to the EMBL/GenBank/DDBJ databases. RL CME, MSU, East Lansing, MI 48824, USA XX FH Key Location/Qualifiers FH FT source 1..3256 FT /organism="Sinorhizobium meliloti" FT /strain="1021" FT /mol_type="genomic DNA" FT /note="locus induced by deprivation of nitrogen and carbon, FT and by tyrosine" FT /db_xref="taxon:382" FT CDS 65..1426 FT /codon_start=1 FT /transl_table=11 FT /gene="hmgA" FT /product="homogentisate dioxygenase" FT /note="tyrosine degradation pathway" FT /db_xref="GOA:Q9X4F5" FT /db_xref="HSSP:1EYB" FT /db_xref="InterPro:IPR005708" FT /db_xref="UniProtKB/Swiss-Prot:Q9X4F5" FT /protein_id="AAD29874.1" FT /translation="MLEKAEKQRRAGSGQQRAAGYMPGFGNDFETESLPGALPQGQNSP FT QKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHTGRFRRVDYPHWKTAPHVGEH FT SLALGQLRWSPLPAPSEALDFLQGIRTMTTAGDALTQAGMAAHAYAFNADMVDDYFFNA FT DGELLIVPETGAIQVFTELGRMDVEPSEICLIPRGMMFKVTRLGEEKVWRGYICENYGA FT KFTLPDRGPIGANCLANPRDFKTPVAAYEDKETPCRVQVKWCGSFHMVEIGHSPLDVVA FT WHGNYAPYKYDLKTFSPVGAILFDHPDPSIFTVLTAPSGEEGTANVDFVIFPPRWLVAE FT HTFRPPWYHRNIMSEFMGLIYGRYDAKEEGFVPGGMSLHNMMLAHGPDFSGFEKASNGE FT LKPVKLDNTMAFMFETRFPQQLTTFAAELDTLQDDYMDCWSGLERKFDGTPGIK" FT CDS 1507..2523 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF2; similar to Mycobacterium tuberculosis unknown FT protein" FT /db_xref="GOA:Q9X4F6" FT /db_xref="InterPro:IPR011234" FT /db_xref="UniProtKB/TrEMBL:Q9X4F6" FT /protein_id="AAD29875.1" FT /translation="MKLATLKDSTRDGKLVVVSKDLTRCSEVGHIARTLQAALDDWAHA FT GPRLERVAEGIETGAQPTMRFHEHDAASPLPRAFQWADGSAYVNHVELVRKARNAEMPA FT SFWTDPLIYQGGSDSFLGPRDPILMADDAWGIDMEGEAAVIVDDVPMGATLDEAKAAIR FT LVMLVNDVSLRGLIPGELAKGFGFYQSKPSSAFSPVAVTPEELGEAWDGGKLHLPLHVD FT LNGEPFGRANAGIDMTFDFPQLIVHAARTMPLSAGTIIGSGTVSNKLEGGPGRPVSEGG FT AGYSCIAELRMIETIEGGAPKTQFLKFGDVVRIEMKDRTGHSIFGAIEQKVGKYERG" FT CDS 2547..3188 FT /codon_start=1 FT /transl_table=11 FT /gene="maiA" FT /product="maleylacetoacetate isomerase" FT /note="tyrosine degradation pathway" FT /db_xref="GOA:Q9X4F7" FT /db_xref="HSSP:1FW1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:Q9X4F7" FT /protein_id="AAD29876.1" FT /translation="MANETVLYDYWRSSASYRVRIALNLCGEAYRSVPVDLLAKAHRAP FT EHLARNPQGLVPVLDIDGERLTQSLAIIEYLAETRDGTGLLPAHPIDRQRVRALSYAVA FT MDIHPVCNLGVVARVMAGAGDGEAARREWMQKFIGEGLAAFERMLDHPATGAFCHGDRP FT TMADLCLVPQVYNARRWDVDLAACPLLVAIDRRCAGIDAFQRAHPDRAKP" XX SQ Sequence 3256 BP; 605 A; 1037 C; 1023 G; 591 T; 0 other; atagttacaa aactgacagt tacgcttgta actaatatag cgaaggaatg aggaggctca 60 agccatgttg gagaaggcgg aaaaacagcg gcgggcaggt tcgggtcagc agcgcgcagc 120 cggctatatg cctggattcg gcaacgactt cgagacggaa agcctgcccg gagcgctgcc 180 gcaggggcag aacagcccgc agaaatgcaa ttacggcctt tatgccgaac agctttccgg 240 ctcacccttt acggcacccc gcggcacgaa cgagcgctcc tggctctacc ggatccgacc 300 gagcgtccgc cacaccggac gcttccgcag ggtcgactat ccgcattgga agacagcgcc 360 gcatgtgggc gagcattccc tggcgctcgg gcagttgcgc tggagccctt tgccggcgcc 420 ctcggaagcg ctggacttcc ttcaaggcat ccgcacgatg acgacggcgg gcgacgcgct 480 gacgcaagcc ggcatggccg cgcatgccta tgccttcaat gccgacatgg tggacgacta 540 tttcttcaac gccgacggcg agttgctgat cgttcccgaa acgggcgcga tccaggtttt 600 caccgaactc ggcaggatgg acgtggagcc gtccgaaatc tgcctcatac cgcgcggcat 660 gatgttcaag gtcactcgcc tcggagagga gaaggtctgg cgcggttaca tctgcgagaa 720 ttacggcgcg aagttcacgc tcccggatcg cggcccgatc ggcgccaatt gccttgccaa 780 tccgcgcgac ttcaagacgc cggtcgccgc ctacgaggac aaggaaacgc cgtgccgggt 840 acaggtgaag tggtgcggct cgttccatat ggtcgagatc ggccattcgc cgctcgacgt 900 cgttgcctgg cacggcaatt acgcgcccta caaatacgac ctcaagacct tctcgcccgt 960 cggcgcgatc ctgttcgacc atcccgatcc gtcgatcttc acggtgctga cggcgccttc 1020 gggagaggag gggacggcca atgtcgactt cgtcatattc ccgccccgct ggctggtcgc 1080 cgaacatacg ttccgccctc cctggtatca ccgcaacatc atgagcgagt tcatgggcct 1140 gatctacggg cgctacgatg cgaaggagga aggattcgtt ccgggcggca tgagcctgca 1200 caacatgatg ctggcgcacg ggccggactt ctccgggttc gagaaggctt ccaacggcga 1260 gctgaagccg gtgaagctcg acaacaccat ggctttcatg ttcgagaccc gcttccctca 1320 gcagctgacg acgtttgccg cagagctcga cacgctgcag gacgactaca tggattgctg 1380 gtccggcctc gaacggaaat tcgacggcac gcctggaatc aagtgacttc cgccgccgaa 1440 ccgtgacatg ctgcaaatat ccgcgccacc cggcgaggat caacaacgca tcgggaacac 1500 cactccatga aactcgcgac gctgaaagat tccacccgcg acggcaagct cgtcgtggtc 1560 tcgaaagacc tgacccgctg ctccgaggtg ggtcatattg cccgcacgct gcaggctgcg 1620 ctcgacgact gggcgcatgc gggtccgcgg ctggagcgcg tcgccgaggg gatcgagacc 1680 ggggcgcagc cgaccatgcg atttcatgag cacgacgcag cctcgccgct gccgcgtgcc 1740 ttccagtggg cggacggttc ggcctatgtc aatcatgtcg agcttgtccg aaaggcgcgc 1800 aatgccgaga tgccggcaag tttctggacc gatccgctga tctatcaggg cggttccgac 1860 agttttctcg gcccacgcga tccgatcctg atggccgacg atgcctgggg catcgatatg 1920 gaaggcgaag ccgctgtcat cgtcgacgac gtgcccatgg gtgcgacgct cgatgaagca 1980 aaggccgcga tccgcctagt catgctcgtc aacgacgtct ccctgcgggg cctcattccc 2040 ggagaactcg ccaagggctt cggcttctat caatcgaagc cgtcctccgc cttctcgccg 2100 gtcgcggtga cgccggagga actcggcgaa gcctgggatg gcgggaagct gcatctgccg 2160 cttcacgtcg atctcaatgg cgagcccttc gggcgggcca atgccggtat cgacatgacc 2220 ttcgattttc cgcagctgat cgtgcacgcc gcgcgaacga tgccgctttc ggccggcacg 2280 atcatcggct cgggcaccgt ttccaacaag ctcgagggcg ggccgggcag gccggtttcc 2340 gaaggcgggg ccggctattc gtgcatcgcg gaattgcgca tgatcgagac gattgaaggc 2400 ggggcgccga aaacgcaatt cctgaaattc ggcgatgtcg tccgcatcga gatgaaggat 2460 cgcaccggcc attcgatttt cggcgccatc gaacagaagg tcggaaaata cgagcgcggc 2520 tgaggccggg cagggtggag acgggtgtgg cgaacgaaac cgtgctttac gactattggc 2580 gctcgtcggc gagctaccgg gtgcggatcg ccctcaacct gtgcggcgaa gcctatcgct 2640 ccgtcccggt cgacctgctc gcaaaggctc atcgcgcgcc ggagcatctc gcccggaatc 2700 cgcagggatt ggtgccggtg ctcgacatcg acggcgagcg cctcacccag tcgctcgcca 2760 tcatcgaata tcttgcggag acgcgggatg ggacgggtct cctcccggcc catcccatcg 2820 accggcaacg cgtccgcgcg ctttcctatg ccgtggcgat ggatatccat cccgtctgca 2880 atctcggcgt ggtcgcccgt gtgatggcgg gcgcgggcga cggcgaggcc gcgcggcgcg 2940 agtggatgca gaaattcatc ggcgagggtc tcgctgcctt cgagcgtatg ctggaccacc 3000 ccgcgaccgg tgcattctgc catggcgatc gtccgacgat ggcggatctc tgccttgtgc 3060 cccaggtcta caatgcgcgg cgctgggatg tcgatcttgc ggcctgcccg cttctggtcg 3120 ccatagatcg ccgctgcgcc ggcatcgacg ccttccagag ggcgcatccc gaccgcgcaa 3180 aaccttagat ccccgtcggg atgcgatttc gtcattccgg acctcgtgtg gcctgttccg 3240 ccaagccgat gtcgcg 3256 // |
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