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EBI DbfetchID AF103874; SV 1; linear; genomic DNA; STD; PRO; 7120 BP. XX AC AF103874; XX DT 15-MAR-1999 (Rel. 59, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Pantoea citrea ccm operon, complete sequence. XX KW . XX OS Pantoea citrea OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pantoea. XX RN [1] RP 1-7120 RX DOI; 10.1128/JB.182.8.2230-2237.2000 RX PUBMED; 10735866. RA Pujol C.J., Kado C.I.; RT "Genetic and biochemical characterization of the pathway in Pantoea citrea RT leading to pink disease of pineapple"; RL J. Bacteriol. 182(8):2230-2237(2000). XX RN [2] RP 1-7120 RA Pujol C.J.; RT ; RL Submitted (02-NOV-1998) to the EMBL/GenBank/DDBJ databases. RL Medical Pathology, University of California Davis Medical Center, Res. Lab RL III. Room 3300A, 4645 2nd Avenue, Sacramento, CA 95817, USA XX FH Key Location/Qualifiers FH FT source 1..7120 FT /organism="Pantoea citrea" FT /strain="1056R" FT /mol_type="genomic DNA" FT /db_xref="taxon:53336" FT CDS 851..1477 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmA" FT /product="CcmA" FT /note="similar to the Escherichia coli CcmA" FT /db_xref="GOA:Q9Z651" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z651" FT /protein_id="AAD19537.1" FT /translation="MLEAKELTCARDERVLFSQLSFTVGAGNIVQIEGPNGAGKTSLLR FT ILAGLSRPESGEILWNQTAVGRQRDIWQREMLYLGHLPGVKGVLSPLENLRFFHPDCSD FT EQIFDALDEVDLTGYEDAIVAQLSAGQQRRVALARLWLSQARLWILDEPLTAIDKAGVE FT KIMSQFASHAGRGGSVILTTHQDLPDQQDVVRKIRLTAEGRDECW" FT CDS 1468..2127 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmB" FT /product="CcmB" FT /note="similar to the Escherichia coli CcmB" FT /db_xref="GOA:Q9Z650" FT /db_xref="InterPro:IPR003544" FT /db_xref="UniProtKB/TrEMBL:Q9Z650" FT /protein_id="AAD19538.1" FT /translation="MLVSIIRRELKIAFRSGSEIINPLWFFLIVITLFPLGIGPESKLL FT ARIAPGIVWVAALLSSLLALERLFRDDFLDGSLEHVGVITDPVTFNGTGKVIAHWLVTG FT VPLIILSPLASLLLSLNFQGWYGLAMTLLLGTPVLSFIGAIGVGLTVGLRRGGVLLSLL FT VLPLVIPVLIFSSAAIDAASQGLSISGYLAILGAMLIASITLAPFATAAAVRISLQ" FT CDS 2174..2914 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmC" FT /product="CcmC" FT /note="similar to the Escherichia coli CcmC" FT /db_xref="GOA:Q9Z649" FT /db_xref="InterPro:IPR003557" FT /db_xref="UniProtKB/TrEMBL:Q9Z649" FT /protein_id="AAD19539.1" FT /translation="MWKWLHQLAKPERLYNICGRFIPWVSLAALITLLLGWIWGFGYAP FT PDYQQGDSYRIMYIHVPAAMWSMGVYASMAIAAFIGLVWQMKMSDLVASAMAPVGAVFT FT FIALVTGSAWGKPMWGTWWVWDARLTSELVLLFIYMGVITLYNAFDDRRVAGRAAGILI FT LVGVVNLPIIHYSVQWWNTLHQGSSGILQQDIAPSMRTPLRWAILGYLLVFISLTLMRL FT RNLILVTERNRPWVSAIANKGRTS" FT CDS 2911..3144 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmD" FT /product="CcmD" FT /note="similar to the Escherichia coli CcmD" FT /db_xref="GOA:Q9Z648" FT /db_xref="InterPro:IPR007078" FT /db_xref="UniProtKB/TrEMBL:Q9Z648" FT /protein_id="AAD19540.1" FT /translation="MTPAFSSWSSFFQMGGYAFYVWLTVGMTLLALGCLIIHTLVQRKQ FT LLKEIRQRESRERRISAAKRKKTAANTAGDHL" FT CDS 3141..3617 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmE" FT /product="CcmE" FT /note="similar to the Escherichia coli CcmE" FT /db_xref="GOA:Q9Z647" FT /db_xref="HSSP:1SR3" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z647" FT /protein_id="AAD19541.1" FT /translation="MNIRRRRRLLVVVAILVGLGLATGLVMYALRSNIDLFYTPSEILN FT GRGPEHKDIPHPGQRLRIGGMVMPGSVKRDPKSLAVEFKLYDANGVVSVSYVGILPDLF FT REGQGIVAEGVLEDGNLSGDQVLAKHDEKYTPPEIEDAMKQNHKGLLNVSEPTR" FT CDS 3624..5591 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmF" FT /product="CcmF" FT /note="similar to the Escherichia coli CcmF" FT /db_xref="GOA:Q9Z646" FT /db_xref="InterPro:IPR003568" FT /db_xref="UniProtKB/TrEMBL:Q9Z646" FT /protein_id="AAD19542.1" FT /translation="MIPEIGSFLLCLALGWAVLLSIYPLWGAARQDSRLMGLARPLTYG FT LFTCIAARFLILVHSFIVNDFTVAYVAENSNTMLPIWYRIAATWGAHEGSLLLWLLMLS FT GWTLAVRLLSRGMPQDAIARVLAVMGMINLGFLLFITLTSNPFIRTLPDFPVDGSDLNP FT MLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTTAAWIFLTIG FT IVLGLGWAYYDLGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKSWTVLLAI FT TAFSLSLLGTFLVRSGVLVSVHSFASDPSRGIFILIFLVIVIGCSLLLYAIRGGQVRSR FT VQPEGWSRESFLLGNNVLLIAAMLVVLLGTLLPLVHKELGLGSISIGAPFFNTMFTWLM FT APFALMLGIGPLVRWRRDEPQKLYKRLIIAAVVTLIASVVLPLLLQDRIEAMTVVGLLM FT SVWVIVLTLMELHERATHRHTFFRGLGHLSRSHWGMVLGHLGVAVTVIGIAFSTQYSVE FT RDVRMKAGDNVDIHNYHFVFRDVQRLVGPNYTGGVAIIDVTRNGKQEAVLHAEKRFYTA FT ARTMMTMVQSVAVLAAIFTHAALGEEIGQGSWAVRLYYKPFVRWIWFGGVFMAVGGILC FT LLDPRYRSRKKAQAQEESLS" FT CDS 5588..6145 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmG" FT /product="CcmG" FT /note="similar to the Escherichia coli CcmG" FT /db_xref="GOA:Q9Z645" FT /db_xref="HSSP:1KNG" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z645" FT /protein_id="AAD19543.1" FT /translation="MNKKILFIPLVLFLLLAAALLWQFNRNADGDDPTLLESALVGKPV FT PVFKLESLQNPGQLYSQKALINGKPLLLNVWATWCPTCRAEHEYLNTLAEKGVRVVGLN FT YKDNRVKAINWLNTLGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGKGIIRYRHAGDL FT NAEVWKDEVQPLWNKYSKLAED" FT CDS 6151..6708 FT /codon_start=1 FT /transl_table=11 FT /gene="ccmH" FT /product="CcmH" FT /note="similar to Escherichia coli CcmH" FT /db_xref="InterPro:IPR005616" FT /db_xref="UniProtKB/TrEMBL:Q9Z644" FT /protein_id="AAD19544.1" FT /translation="MRKLILFLAAMMTSFSLWAAIDTYQFKSLAQEEQYRDLTQSLRCP FT KCQNNSIADSGAMIAADMRQKVYELQQQGQTRQQIVEYMVKRYGNFVTYEPPVTPSTII FT LWVGPLLFVVAGAAIIIMRTEEKKRGLSWTVQNSKDWLRYWIMTGNRYECPLVKYLYFI FT TGGVCFNSHQWLAFRKRHQQSA" XX SQ Sequence 7120 BP; 1589 A; 1577 C; 1994 G; 1960 T; 0 other; tatgggtctc gagagtcgac ctgcatcacc ggcaatacgg cagtgatggt attttcagta 60 aacaattgct gatgggcgat aatcacaatg atgaagccga cacaatagcc gaagttttcc 120 agcaaaaaac tacctggcag cccttcggta tgtacctgca acaggccctt taccaatagt 180 gaggtgccca tcgacaatcc cgccgcaatc gctgacagga gcagcgccat accgtcgcgt 240 tccagctctt tttcaccgtt ctggcgtatg gtttcatgaa tagcgacggc tttcgaaggc 300 agttgttcct cttcagtatt tattgaagtt tcattacttt tttcttcgct gtcgacctga 360 ttgtcacggg gagctgaaga gtgggaattt tgcacgtggc ctccggtgga aaagatgaat 420 atttcatagt tctgagtgta gtatttttct gcacttttaa ggaaaaatca gtcgtagttg 480 ttgttattgc gatgttgtct taatgaaggt gaggtgaaat tcagttgtaa aagccggagt 540 ggggggagac aaccctgtca gggttgtttt tacagcacga atagcacaaa cccgcatggt 600 aattgatgtc gcatctggta ggatttagcg ccggacgata aatagctgtg ctgaaatccc 660 gcggaaatga gagccgtaaa ctgtgggtaa atcacaataa gcgtaacaaa gttttatcat 720 tggccggttt ttaggcagaa aagttgtcgt taaggaactt ttaagtaacc gtttccattt 780 tcgacattcg gcagagagtt tccttatggt atagtgcggc cttcttaacg taatcgtgaa 840 tataagttgc atgctggaag ccaaagaact tacctgtgcc cgggatgagc gggtgttatt 900 ttcacagctc tcatttacgg tcggtgccgg caatattgtc cagatagaag ggcctaacgg 960 ggctggtaaa acctccttgt tacgtatcct ggctggcctg agccgtccgg aatccggaga 1020 gattctgtgg aatcaaacgg cagttggccg gcagcgtgat atctggcaac gtgagatgtt 1080 atatcttgga catctgcccg gggtaaaagg ggtattgtct ccgctggaaa atctgcgttt 1140 ttttcatccg gattgtagcg atgagcaaat ttttgatgca ctggatgaag tggatttgac 1200 cggttatgag gacgcgattg ttgcccagct ttctgcaggc cagcagcgca gagtcgcact 1260 ggccagacta tggctaagcc aggcacggtt atggatactg gatgaaccgc taacggccat 1320 cgataaagcc ggagtggaaa aaataatgtc acaatttgcc agtcacgcag ggcggggggg 1380 atccgttatc cttaccaccc atcaggatct gcccgatcaa caggatgtgg tgcgtaaaat 1440 tcgcctgaca gcggaaggac gtgacgaatg ctggtaagta ttattcgccg tgaacttaaa 1500 attgcctttc gcagtggttc ggaaattatt aatccgctgt ggtttttcct gatagtgatt 1560 acgttgtttc cgctgggaat tggccccgaa tcaaaattac ttgccagaat tgcaccgggt 1620 atcgtctggg tggcggcatt gctgtcatca ttactggcac tggaacgctt gttccgtgat 1680 gactttctgg atggttcact ggaacacgtt ggtgttatta ccgaccccgt tacctttaac 1740 ggtactggaa aagtcatagc ccactggctg gtgaccgggg taccgttaat tattttgtcg 1800 cccctggcct cgttattatt gtcgctgaat tttcagggct ggtacgggct ggcgatgaca 1860 ctgctactgg gtacaccggt gttgagtttt atcggtgcta tcggggtagg gctgacggtg 1920 gggctcagac gtggcggagt attattgagt ttactggttt tgcctctggt cattccggtg 1980 ctgatttttt caagtgcagc cattgatgct gccagtcagg gattatcgat aagtggttac 2040 ctggccatat taggcgcaat gctaatcgcc agtattactc tggcaccttt tgccacagcc 2100 gcagcggtac gtattagtct tcaataaact gcgagttgtg ctgcttttag taaatattag 2160 tgagcaatac aaaatgtgga aatggttaca ccaactggca aagccagaac ggctttataa 2220 catctgcggc aggtttattc cctgggtaag tctggcggcg ttgattactt tactgctcgg 2280 atggatttgg ggatttggtt atgccccgcc ggattatcaa cagggcgaca gctaccgtat 2340 tatgtatatt catgtgccgg cagcgatgtg gtcgatgggt gtttatgcct caatggccat 2400 tgcggcattt attggcctgg tctggcagat gaaaatgtct gatctggtgg cctcagccat 2460 ggctccggtc ggggcggtat tcacctttat cgctctggtg accggctctg cctggggcaa 2520 accgatgtgg ggcacctggt gggtctggga tgcacgtctg acatcggaac tggtactgct 2580 gtttatctat atgggggtca ttaccctgta taacgccttt gatgatcgtc gggttgcggg 2640 gcgtgccgcc ggtatcctga ttctggtcgg ggtagtgaac ctgcctatta ttcattactc 2700 ggttcagtgg tggaataccc tgcatcaggg ctcttccggt attttgcagc aggacattgc 2760 tccatcgatg cgtaccccgt tacgctgggc catcctcggt tatctgctgg ttttcatttc 2820 tctgaccctg atgcgtctgc gtaacctgat tctggtcacc gaacgaaatc gcccctgggt 2880 ttctgctatt gcaaataagg ggcgtacgtc atgacacctg ctttctcttc atggtccagt 2940 tttttccaga tgggaggtta tgccttctat gtctggctta ctgtcggtat gacgttactg 3000 gcactgggat gcctgatcat ccataccctg gtacaacgaa aacaattatt aaaagaaata 3060 agacagcgtg aatcccgtga acgcaggatc agcgctgcaa aacgaaaaaa aaccgccgct 3120 aacacggcag gagatcactt gtgaacattc gtcgtcgtcg ccgcttactg gttgtggtgg 3180 caatactggt cggcctcggt ctggcgactg gtttagttat gtatgcactg cgttcaaaca 3240 ttgatttgtt ctatacaccc agtgaaattc tgaacggacg gggtcctgag cataaggata 3300 tacctcatcc ggggcaacgg ttacgcattg gcggtatggt tatgccaggc agcgtaaaac 3360 gtgatccgaa aagtctggca gtggagttca aactgtatga cgccaacggc gttgtcagtg 3420 tgagctatgt cggtattctt cctgatctgt ttcgtgaagg gcaggggatt gtcgcagagg 3480 gcgtgctgga agatggtaat ctgtcaggcg atcaggtgct ggccaaacat gatgagaaat 3540 acacgccacc agaaattgaa gatgcgatga aacagaacca caaagggctg ctaaacgtat 3600 cagaacccac aaggtgagca acaatgatac ctgaaatagg cagttttttg ttatgcctgg 3660 cccttggctg ggctgtgtta ctgagtattt acccgctgtg gggagccgcg cgacaggaca 3720 gtcgtttgat gggactggcc cggcctttga cttatggttt gtttacctgt attgcggcac 3780 gatttctgat tctggtgcat tcttttattg tcaacgactt tactgtggcc tatgtcgctg 3840 agaactccaa taccatgctg ccaatctggt accgcattgc agcaacctgg ggagctcatg 3900 agggatcgtt actgctctgg ttactgatgc tcagtggctg gacactggcg gtacggttgc 3960 tgagtcgtgg tatgccacag gatgccattg cccgggtgct ggcggtgatg ggcatgatta 4020 accttggctt cctgctgttt attactctga cctccaaccc gtttatccgg acattacctg 4080 atttccccgt tgatggcagc gatctcaacc caatgctcca ggatatcgga ctgattttcc 4140 acccgccatt actctatatg gggtacgtcg gattctcagt ggcatttgcg tttgccattg 4200 cttcactgat gaccgggcgg ctcgatacgg catgggcccg ctggtcacgt ccgtggacga 4260 cagcggcgtg gattttcctg accatcggga ttgttttagg gctcggctgg gcttattacg 4320 acctgggctg gggtggctgg tggttctggg atccggttga aaatgcctcg ctgatgccgt 4380 ggctggccgg aaccgcattg attcactcac tggcggtgac agagaaacgc gggaccttta 4440 aatcctggac tgtgttactg gctattaccg ccttctcact gagtctgttg gggaccttcc 4500 tggtacgttc aggtgtcctg gtatcggttc actcgttcgc gtccgatcct tcccgtggta 4560 tttttattct gatattcctg gtgattgtca tcggatgttc gttactgctg tacgctatcc 4620 gtggtggaca ggtgcgtagc agggtacagc ctgaaggctg gtcgagagag tcgtttctgt 4680 taggaaataa tgttctgttg attgccgcta tgctggtggt attgctgggg actttgttac 4740 ccctggtaca caaggaactg ggcctgggca gcatttcgat tggtgcgccg ttcttcaata 4800 ctatgtttac ctggctgatg gcgccgtttg ctctgatgtt gggtattggg cctctggtac 4860 gctggcgtcg tgatgaacct cagaaattgt ataagcggtt aattattgcg gcggttgtca 4920 ctctgattgc ttccgttgtc ctgccattac tgttgcagga ccgtattgaa gcgatgacgg 4980 tggttggtct gctgatgtca gtctgggtaa ttgtactgac gctgatggaa cttcatgagc 5040 gtgcaaccca tcgccatacc tttttccgtg ggctgggaca tctgtcccgc agtcactggg 5100 gaatggttct ggggcatctt ggcgtggcgg tgacggtgat tggaatagcg ttcagtaccc 5160 aatacagtgt tgaacgcgat gtccgtatga aagccggtga taacgtcgat atccataatt 5220 atcattttgt tttccgtgat gttcagcgcc tggtgggtcc taactatacc ggcggggtgg 5280 caattattga tgtcacccgc aacggaaaac aagaagctgt gctgcatgca gagaaacgtt 5340 tttataccgc cgcccgcacc atgatgacga tggtgcaatc agtggcggtt ttggccgcga 5400 tctttacgca cgcagccctg ggtgaagaga taggccaggg ttcctgggcc gttcgtctct 5460 attacaaacc ttttgttcgc tggatttggt tcggtggtgt gtttatggcg gttggcggta 5520 ttttgtgtct gctcgacccg cggtatcgct cccgcaagaa agcacaggca caggaggaat 5580 cactgtcatg aataaaaaaa ttctgttcat cccgttagtg ttgtttctgc tgctggcagc 5640 ggcgctactg tggcagttca accggaatgc agacggggat gatccaacgc ttctggaatc 5700 agcgctggtc ggcaaaccgg taccggtgtt caaactggaa tcactgcaaa acccgggaca 5760 actgtacagt cagaaagcgc ttatcaatgg taagccgtta ctgctgaatg tctgggccac 5820 ctggtgcccg acctgccgtg ccgagcatga gtatctaaat acgctggctg agaagggggt 5880 ccgggtcgtt ggactgaact ataaagataa ccgggtgaaa gcgattaact ggctaaatac 5940 tctggggaat ccatatgctc tgagcctcta tgatggtgac ggaatgctgg ggctggattt 6000 aggtgtttat ggcgcgccgg aaaccttcct gatcgacggc aaaggtatta tccgttatcg 6060 ccatgcaggc gatttgaatg ctgaagtctg gaaagatgaa gtccagccgt tatggaacaa 6120 gtacagcaag ttggcggagg attgacccga atgagaaaac tgatcctttt cctggcggca 6180 atgatgacca gttttagtct gtgggcggcg atagatactt atcagtttaa atctctggca 6240 caggaagaac agtatcggga tctgacgcag tcactacgtt gtccaaaatg tcagaataat 6300 agcattgctg actccggcgc gatgatcgca gcggatatgc gtcagaaggt ttatgaactg 6360 cagcagcagg ggcaaacccg ccagcagatt gtcgaatata tggtgaaacg ttacgggaac 6420 tttgtcactt atgaacctcc ggtgacaccg tccaccatta ttttgtgggt cggtccgctg 6480 ttatttgtag ttgcaggtgc tgcgataatt attatgcgta cagaagaaaa aaaacgcggg 6540 ctgagctgga cagtacagaa cagcaaagac tggctgcgtt actggataat gacgggaaac 6600 cgctatgagt gccctttggt taagtatttg tattttatta ctggcggcgt gtgctttaat 6660 tctcaccagt ggctggcgtt caggaaaaga caccagcaat cagcgtgatc agctaaataa 6720 atctttttat cgtcaacgtc tgacagagct ggaagaggac gaacagcaag gggtagtggc 6780 tgagaaacat gaaatgattg ctgagttaca gcaacattac tgaccgatat tccggaaaat 6840 cagcagcagg ctaaagcgcg gacttccggt cgctgggtac tctggctggg acttatcgtc 6900 ttagtactga tcaccctcgg catgtatctg aaaacgggtg ggttgttgca ggtcatgcag 6960 tggaatcaga tccgtaatga ttatccgggc gtttgcgcca gcggttaatg gatcccaatg 7020 ctaaaaacct gagcatgcag gaattacagg aattcgaggt tggattgcgg acttctctgc 7080 aatcagagcc ggataatctg aatgactggg aaatgctcgg 7120 // |
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