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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF098551; SV 1; linear; viral cRNA; STD; VRL; 1389 BP.
XX
AC   AF098551;
XX
DT   18-OCT-1999 (Rel. 61, Created)
DT   11-JUL-2007 (Rel. 92, Last updated, Version 5)
XX
DE   Influenza A virus (A/Aquatic Bird/Hong Kong/m603/98 (H11N1)) neuraminidase
DE   gene, partial cds.
XX
KW   .
XX
OS   Influenza A virus (A/Aquatic bird/Hong Kong/M603/98(H11N1))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1389
RX   PUBMED; 10074191.
RA   Zhou N.N., Shortridge K.F., Claas E.C., Krauss S.L., Webster R.G.;
RT   "Rapid evolution of H5N1 influenza viruses in chickens in Hong Kong";
RL   J. Virol. 73(4):3366-3374(1999).
XX
RN   [2]
RP   1-1389
RX   PUBMED; 16318689.
RG   World Health Organization Global Influenza Program Surveillance Network
RA   ;
RT   "Evolution of H5N1 avian influenza viruses in Asia";
RL   Emerg. Infect. Dis. 11(10):1515-1521(2005).
XX
RN   [3]
RP   1-1389
RA   Zhou N.N., Krauss S., Webster R.G.;
RT   ;
RL   Submitted (15-OCT-1998) to the EMBL/GenBank/DDBJ databases.
RL   Virology and Molecular Biology, St. Jude Children's Research Hospital, 332
RL   N. Lauderdale, Memphis, TN 38105, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1389
FT                   /organism="Influenza A virus (A/Aquatic bird/Hong
FT                   Kong/M603/98(H11N1))"
FT                   /chromosome="segment 6"
FT                   /strain="A/Aquatic Bird/Hong Kong/m603/98 (H11N1)"
FT                   /mol_type="viral cRNA"
FT                   /note="RT-PCR amplified and cloned from virus grown in
FT                   embryonated chicken eggs"
FT                   /db_xref="taxon:129775"
FT   CDS             <1..1367
FT                   /codon_start=3
FT                   /product="neuraminidase"
FT                   /db_xref="GOA:Q9PZM6"
FT                   /db_xref="HSSP:1F8E"
FT                   /db_xref="InterPro:IPR001860"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="UniProtKB/TrEMBL:Q9PZM6"
FT                   /protein_id="AAF02314.1"
FT                   /translation="VIGIVSLMLQIGNIISIWVSHSIQTGNQHQPEPCNQSIITYENNT
FT                   WVNQTYVNISNTNFLTEQAVTSVTLAGNSSLCPISGWAIHSKDNGIRIGSKGDVFVIRE
FT                   PFISCSHLECRTFFLTQGALLNDKHSNGTVKDRSPYRTLMSCPVGEAPSPYNSRFESVA
FT                   WSASACHDGISWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGS
FT                   CFTVMTDGPSNGQASYKIFKIEKGKVVKSVELNAPNYHYEECSCYPDAGEITCVCRDNW
FT                   HGSNRPWVSFNQNLEYQIGYICSGVFGDNPRPNDGTGSCGPVSSNGAYGVKGFSFKYGN
FT                   GVWIGRTKSTSSRSGFEMIWDPNGWTETDSSFSMKQDIVAITDWSGYSGSFVQHPELTG
FT                   LNCMRPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK"
XX
SQ   Sequence 1389 BP; 410 A; 261 C; 345 G; 373 T; 0 other;
     tggtaattgg aatagtcagc ttgatgttac aaattgggaa cataatctca atatgggtca        60
     gtcattcaat tcagacgggg aatcaacacc aacctgaacc atgcaatcaa agcatcatta       120
     cttatgaaaa caacacctgg gtaaatcaga catatgtcaa catcagcaat accaattttc       180
     ttactgagca agctgtgact tcagtaacat tagcgggcaa ttcatctctt tgccctatta       240
     gtggatgggc tatacacagt aaggacaacg gtataagaat tggttccaag ggggatgtat       300
     ttgttataag agagccattc atctcatgct cccacttgga atgcagaacc ttctttttga       360
     ctcagggagc cttgttgaac gacaagcatt ctaatgggac cgtcaaagac agaagccctt       420
     acagaacctt gatgagttgt cctgtgggtg aggctccttc cccatataac tcaaggtttg       480
     agtctgttgc ttggtcagca agtgcttgtc atgatggcat tagttggttg acaattggga       540
     tttctggtcc agacaatggg gctgtggctg tattgaaata caatggcata ataacagaca       600
     ctatcaagag ctggaggaac aacatactga gaactcaaga gtctgaatgt gcatgtgtaa       660
     atggttcttg ctttaccgta atgacagacg gaccaagtaa tggacaggcc tcatacaaga       720
     tcttcaagat agaaaaaggg aaagtagtta aatcagtcga attgaatgcc cctaattatc       780
     actacgagga gtgctcctgt tatcctgatg ctggtgaaat cacatgtgtg tgcagggata       840
     attggcacgg ctcgaatcgg ccgtgggtat ctttcaacca aaatctggag tatcaaatag       900
     gatatatatg cagtggagtt ttcggagaca atccacgtcc caatgatggg acaggcagtt       960
     gtggtccggt gtcttctaac ggggcatatg gagtaaaagg gttttcattt aaatacggca      1020
     atggtgtttg gatcgggaga accaaaagca ctagctccag gagcggtttt gaaatgattt      1080
     gggatccaaa tgggtggact gaaacagaca gtagcttctc aatgaagcaa gatatcgtag      1140
     caataactga ttggtcagga tatagcggga gttttgtcca gcatccagaa ctgacaggat      1200
     taaattgcat gagaccctgt ttctgggttg agctaatcag aggacggccc aaagagaaca      1260
     caatttggac tagtgggagc agcatatcct tttgtggtgt aaatagtgac actgtgggtt      1320
     ggtcttggcc agacggtgct gagttgccat tcaccattga caagtagttg gttccaaaaa      1380
     ctccttgtt                                                              1389
//
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