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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF098302; SV 1; linear; mRNA; STD; PLN; 1297 BP.
XX
AC   AF098302;
XX
DT   18-OCT-1999 (Rel. 61, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Brassica juncea chitinase mRNA, complete cds.
XX
KW   .
XX
OS   Brassica juncea
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Brassica.
XX
RN   [1]
RP   1-1297
RX   DOI; 10.1023/A:1006266407368
RX   PUBMED; 10527425.
RA   Zhao K.J., Chye M.L.;
RT   "Methyl jasmonate induces expression of a novel Brassica juncea chitinase
RT   with two chitin-binding domains";
RL   Plant Mol. Biol. 40(6):1009-1018(1999).
XX
RN   [2]
RP   1-1297
RA   Zhao K.-J., Chye M.-L.;
RT   ;
RL   Submitted (13-OCT-1998) to the EMBL/GenBank/DDBJ databases.
RL   Department of Botany, The University of Hong Kong, Hong Kong, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1297
FT                   /organism="Brassica juncea"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:3707"
FT   CDS             4..1206
FT                   /codon_start=1
FT                   /product="chitinase"
FT                   /db_xref="GOA:Q9SQF7"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="InterPro:IPR001002"
FT                   /db_xref="InterPro:IPR018371"
FT                   /db_xref="PDB:2Z37"
FT                   /db_xref="PDB:2Z38"
FT                   /db_xref="PDB:2Z39"
FT                   /db_xref="UniProtKB/TrEMBL:Q9SQF7"
FT                   /protein_id="AAF02299.1"
FT                   /translation="MKTYLLLLLIFSLLLSFSSGEQCGSQSIPEGALCPNGLCCSEAGW
FT                   CGTTEAYCGHGCQSQCNPGPYPPPPTPQCGRQSIPAGALCPNGLCCSEAGWCGTTEAYC
FT                   GHGCQSQCTPIPTPPAPTPTPPTPTPPSPTPPGPTPPGPSGDLSGIISRDQFYKMLKHM
FT                   NDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPD
FT                   GANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLE
FT                   LLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVI
FT                   TNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDCDNQRPFNEGSNVFLDAA
FT                   I"
XX
SQ   Sequence 1297 BP; 320 A; 354 C; 299 G; 324 T; 0 other;
     aacatgaaga cttatctcct tctccttctc atcttctcac ttctcttatc attttcctcc        60
     ggtgagcaat gcggtagtca atccataccc gagggagcac tctgccccaa cggtctatgc       120
     tgcagcgagg ctggatggtg cggcaccacc gaagcttact gcgggcatgg ttgtcaaagc       180
     cagtgcaatc ctggtcccta tcctcctcct ccaaccccgc agtgtggtcg tcaatccata       240
     cccgcgggag ccctctgccc caacggtcta tgctgtagcg aggctggatg gtgcggcacc       300
     accgaagctt actgcgggca tggttgccaa agccagtgca ctcccattcc cactcctcct       360
     gctcccactc ccactcctcc tactcccact cctcctagtc ctacccctcc tggtcccact       420
     cctcctggtc ccagcgggga tctttctggc atcatttcaa gagatcagtt ctataaaatg       480
     cttaagcaca tgaacgacaa tgattgtcat gctgttggtt tcttcactta cgacgccttc       540
     atcaccgccg ctaagtcttt cccaagtttc gggaacaccg gagaccttgc catgaggaag       600
     aaggagatag cagccttctt cggccagact tcccacgaaa ccaccggtgg gtggtcgggt       660
     gcacccgatg gagcaaatac atggggctac tgttacaagg aagaaattga caaaagcgat       720
     ccccactgtg atagcaacaa cctcgagtgg ccatgcgcac caggcaaatt ttactacgga       780
     cgaggaccaa tgatgctgtc ttggaactat aattacggac cgtgcgggag agacctagga       840
     ctcgagttac tcaagaaccc agatgttgcg tccagcgacc cagtgatagc tttcaaaacc       900
     gccatttggt tctggatgac tcctcaagct cctaaaccct cgtgccacga cgtgatcacc       960
     gaccagtggg agccgtcggc tgccgacatt tctgccggaa ggttaccagg ttatggagtg      1020
     attaccaata tcatcaacgg tggattagag tgtgctggtc gcgacgtcgc aaaggtccaa      1080
     gatcggatat cgttttatac aaggtactgt ggcatgtttg gtgttgatcc tggaagtaat      1140
     attgactgtg acaatcaaag gccgtttaat gaaggtagta acgttttctt ggatgctgca      1200
     atttaataag tactgttaat gaagctttgt tgtatccaag caataagaga gtatcaaatt      1260
     aaattaaata aaactccttt ttattaagta aaaaaaa                               1297
//
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