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EBI DbfetchID AF095636; SV 1; linear; genomic DNA; STD; PRO; 6961 BP. XX AC AF095636; XX DT 23-NOV-1998 (Rel. 57, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Yersinia pestis urease gene locus, complete sequence. XX KW . XX OS Yersinia pestis OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. XX RN [1] RP 1-6961 RX DOI; 10.1128/IAI.69.1.170-176.2001 RX PUBMED; 11119503. RA Sebbane F., Devalckenaere A., Foulon J., Carniel E., Simonet M.; RT "Silencing and reactivation of urease in Yersinia pestis is determined by RT one G residue at a specific position in the ureD gene"; RL Infect. Immun. 69(1):170-176(2001). XX RN [2] RP 1-6961 RA Sebbane F., Devalckenaere A., Simonet M.; RT ; RL Submitted (28-SEP-1998) to the EMBL/GenBank/DDBJ databases. RL Departement de Pathogenese des Maladies Infectieuses, Institut de Biologie RL de Lille, 1 rue du Professeur A. Calmette, Lille 59021, France XX FH Key Location/Qualifiers FH FT source 1..6961 FT /organism="Yersinia pestis" FT /strain="6/69M" FT /mol_type="genomic DNA" FT /db_xref="taxon:632" FT CDS 744..1046 FT /codon_start=1 FT /transl_table=11 FT /gene="ureA" FT /product="urease gamma subunit UreA" FT /EC_number="3.5.1.5" FT /note="structural protein" FT /db_xref="GOA:P69994" FT /db_xref="HSSP:1EJX" FT /db_xref="InterPro:IPR002026" FT /db_xref="UniProtKB/Swiss-Prot:P69994" FT /protein_id="AAC78632.1" FT /translation="MQLTPREVEKLMIYTLSDVAFKRKARGLKLNYPEAVSIITVTAME FT GARDGKSVEDVMKEASKVLTKDDVMDGVADLIPNVQVEAIFTDGSRLVTVHDPIK" FT CDS 1099..1533 FT /codon_start=1 FT /transl_table=11 FT /gene="ureB" FT /product="urease beta subunit UreB" FT /EC_number="3.5.1.5" FT /note="structural protein" FT /db_xref="GOA:P69990" FT /db_xref="HSSP:1E9Z" FT /db_xref="InterPro:IPR002019" FT /db_xref="UniProtKB/Swiss-Prot:P69990" FT /protein_id="AAC78633.1" FT /translation="MSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGD FT RPIQVGSHFHFFEVNRALEFDRAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTL FT YGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK" FT CDS 1623..3341 FT /codon_start=1 FT /transl_table=11 FT /gene="ureC" FT /product="urease alpha subunit UreC" FT /EC_number="3.5.1.5" FT /note="structural protein" FT /db_xref="GOA:Q9ZFR9" FT /db_xref="HSSP:1FWF" FT /db_xref="InterPro:IPR017950" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZFR9" FT /protein_id="AAC78634.1" FT /translation="MPQISRQEYAGLFGPTTGDKIRLGDTNLFIEIEKDLRGYGEESVY FT GGGKSLRDGMGANNNLTRDNGVLDLVITNVTIVDARLGVIKADVGIRDGKIAGIGKSGN FT PGVMDGVTQGMVVGVSTDAISGEHLILTAAGIDSHIHLISPQQAYHALSNGVATFFGGG FT IGPTDGTNGTTVTPGPWNIRQMLRSIEGLPVNVGILGKGNSYGRGPLLEQAIAGVVGYK FT VHEDWGATANALRHALRMADEVDIQVSVHTDSLNECGYVEDTIDAFEGRTIHTFHTEGA FT GGGHAPDIIRVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVSFAES FT RVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRILQTADAMKAARGKLPEDAAG FT NDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWDPRFFGAKPKMVIKGGMI FT NWAAMGDPNASLPTPQPVFYRPMFGAMGKTLQDTCVTFVSQAALDDGVKEKAGLDRQVI FT AVKNCRTISKRDLVRNDQTPNIEVDPETFAVKVDGVHATCEPIATASMNQRYFFG" FT CDS 3637..4332 FT /codon_start=1 FT /transl_table=11 FT /gene="ureE" FT /product="urease accessory protein UreE" FT /function="putative nickel transporter" FT /db_xref="GOA:Q9ZFR8" FT /db_xref="InterPro:IPR004029" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZFR8" FT /protein_id="AAC78635.1" FT /translation="MILIEHILGNVKKDPVWREKLKDATFDLLILDQREAQKSRCRKSS FT TQGLDLGISLDRNVVLADGDVLAWDEETNVAVVVQINLRDVMVIDLSELKSRSPDELIK FT TCFELGHALGNQHWKAVTKHNEVYVPLTVATTMMDSVMRTHGFQHLPFRFVKGAEILPL FT LTNSEARLLFGGAEDTDTHVHVASPLDEPHGSGLHIHGIHSHEEGHSHGDHDHDHSHSH FT GDHDHDHKH" FT CDS 4354..5040 FT /codon_start=1 FT /transl_table=11 FT /gene="ureF" FT /product="urease accessory protein UreF" FT /function="unknown" FT /db_xref="GOA:Q9ZFR7" FT /db_xref="InterPro:IPR002639" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZFR7" FT /protein_id="AAC78636.1" FT /translation="MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKG FT FVLTALKQAASCDGMGVVVAHRAVMADDRDGIIRADWAVNNRKLNEESRLMATRMGKKL FT AEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVAMTI FT LSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAH FT VRLFSN" FT CDS 5167..5829 FT /codon_start=1 FT /transl_table=11 FT /gene="ureG" FT /product="urease accessory protein UreG" FT /function="putative GTP binding protein" FT /db_xref="GOA:P69992" FT /db_xref="InterPro:IPR004400" FT /db_xref="UniProtKB/Swiss-Prot:P69992" FT /protein_id="AAC78637.1" FT /translation="MTDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLII FT TNDIVTTEDAKQVKRTLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPE FT SDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKIDLA FT PYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA" FT CDS 5826..6659 FT /codon_start=1 FT /transl_table=11 FT /gene="ureD" FT /product="urease accessory protein UreD" FT /function="putative chaperone protein" FT /db_xref="GOA:Q9ZFR5" FT /db_xref="InterPro:IPR002669" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZFR5" FT /protein_id="AAC78638.1" FT /translation="MTAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKS FT GYLKLRFAKREHCSILAEMERRVPSLVQKALYWDEEIPELPCVTMISTSGCILQGDRLA FT TDVHVEAGACAHVTTQSATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNSRFI FT TDTTISIHPTATAIYSEVLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLE FT PKVESLDAVGVMQTFDAFGNVILLTPKEHHDRILARVPAHFDIKGGDCQRRDAST" XX SQ Sequence 6961 BP; 1846 A; 1471 C; 1857 G; 1787 T; 0 other; ttttaattta ttgattttaa agtttttttg ttttaatttt aactgatttt atacttttga 60 ctataaagtt ataaaataat ggtgaaattt ccaagtttta gcctatattc tttataggtg 120 aagcatctat agcaatgaat tgatttttag cgtctttttt tacaaaaata atgatgtaaa 180 atctaactca tgataattat ttattgacta tgtaaagtaa atccgtaatg gattttatta 240 tcaattatcc agtgtagaca aatacagtaa acgtattgcc ctttggtaaa aaaatatttc 300 tgaacactgt ttttatgttg aattcgctca ctgagcgcgg taaaaatact gagcgataaa 360 attatcatac aaatagggtg gtggataatt tgtcttgatt ttagcttgct ggcaggcagc 420 aggttaatgg aagtttaaat gtagggttag cgttaaagat aaggatttaa cctaatgtac 480 aggaggatgt gcttaattct gaaatattct aacgagtggg tataaataac ctattcttta 540 tcttctatat accttcttca ttgacgttgc agcggtctca gcggcgctca ttcatccgaa 600 tcactggcgg gagtcagcgc atcgtgatgc gctcgtttgt ctggctgtaa cacgagagac 660 cttggatata ggctgggaag atcataggtt tagtcagttg ctttttctca ctttcacttt 720 cttaacatga tacaggaggg cttatgcagc tcaccccaag agaagttgaa aagctcatga 780 tctacacgct gtctgatgtg gcgtttaagc gcaaagcgcg tggcttgaaa ctcaattatc 840 cggaagctgt ttctatcatt actgtgactg caatggaagg agccagagat ggcaaatccg 900 tagaagatgt gatgaaggaa gccagtaaag tgctgaccaa agatgatgtg atggatgggg 960 tggcagattt gatcccgaat gttcaggttg aggcgatttt taccgatggc agccgtctgg 1020 tcacggtaca cgaccctatt aagtagtgac ggcaacatgc gagtaaaacc tgaactgatt 1080 attgcagagg attcaagcat gagcgcgaag aaaagtacga aagacagtaa agaacagaat 1140 acgccactgg gtggcctcgt tttagcggaa acaccaatta cgtttaacga aaataaaccc 1200 gtgaccaaag ttaaagtccg caataccggt gaccggccaa ttcaggttgg gtcccatttc 1260 catttcttcg aggttaaccg cgcactggaa tttgatcgtg cagcagctta tggcaagcgc 1320 ctcaatatct cctcgacgac ggctatccgt tttgaacctg gtgatgaaac tgaagttccg 1380 cttatcccct ttggcggcaa gcagacactg tatggtttta acaatcttgt cgatgggtgg 1440 accggtgagg gtgtggtacc caacagtgag cgcccggata aactcgcggc tatccgcctt 1500 gccgccgagc gtggttttaa atcatctaaa taacgccttg tttacagagc aaatcatcga 1560 aattcgcata cgtgtaatgg ggtaaagcag ttacacgcac cggaaaaaga aaggagcgac 1620 agatgcctca aatttctcgg caagaatacg cgggtctatt tggcccaaca actggcgata 1680 aaatccgttt gggtgatacc aatctgttta tcgaaatcga aaaagacttg cgtggatatg 1740 gtgaagagtc ggtttacggt ggtgggaaat cgctgcgtga cgggatgggg gccaacaata 1800 atctgacccg cgataatggt gtgcttgacc tggtgattac caacgtcacg attgtcgatg 1860 ctcgcttagg ggtgattaaa gctgacgtcg gtatccgcga tggcaaaatc gccggtatcg 1920 gtaagagcgg taaccccggt gttatggatg gggttacgca gggtatggtg gtcggtgtga 1980 gcaccgatgc tatctctggt gagcatttga ttcttactgc cgccggtatc gatagccata 2040 ttcatctcat ctccccgcaa caggcctatc atgcgctgtc caacggtgtt gcaacattct 2100 ttggtggggg gattggtcca acggatggca ctaacgggac aaccgtaaca ccagggccgt 2160 ggaatatccg tcaaatgctg cgttcgatag aggggttacc tgtcaacgtt ggtattttgg 2220 ggaaaggtaa ttcatacggg cgcggcccgt tgctggaaca ggctattgcc ggtgttgtgg 2280 gctataaagt tcatgaagac tggggcgcga cggcgaatgc tttgcgtcat gcgctgcgga 2340 tggcggatga ggtggatatt caggtttcgg ttcataccga tagcctgaat gaatgtggtt 2400 atgtagaaga tactatcgat gcgttcgaag gccgcacgat ccacacgttc cacaccgaag 2460 gggcgggtgg gggccatgcg ccggatatta ttcgggtggc cagccaaact aacgtactgc 2520 caagttcaac caaccccacc ctgccgtatg gtgttaacag ccaggctgag ctgtttgaca 2580 tgattatggt gtgtcacaac cttaacccga acgtacctgc tgacgtctcc tttgccgaaa 2640 gccgtgtgcg cccagaaacg attgctgctg aaaacgttct gcacgatatg ggcgttatct 2700 ccatgttctc cagtgactca caagccatgg ggcgagtggg ggagaactgg ttgcgtattt 2760 tgcaaaccgc ggatgcgatg aaagcggctc ggggcaaatt gccggaagat gcggcgggta 2820 acgataattt ccgcgtgctg cgctatgtgg caaaaatcac cattaacccc gcgattacac 2880 agggggttag ccatgttatc ggatcggttg aagtgggcaa aatggccgat ctggtgctat 2940 gggatcctcg cttctttggt gcgaaaccga agatggttat caaggggggc atgattaact 3000 gggccgcgat gggcgatcca aatgcgtcac tgccaacacc acagccagtg ttctaccgcc 3060 caatgtttgg cgcgatgggc aaaacgctac aagacacttg tgtcactttc gtttctcagg 3120 ctgcacttga tgatggtgtg aaagagaaag cggggctgga tcgccaagtg atagcggtta 3180 aaaactgccg cacgatctcc aaacgtgatc tggtgcgtaa tgaccaaaca ccaaacattg 3240 aagtggatcc tgaaaccttt gcagtaaaag tggatggggt acatgccacc tgtgagccaa 3300 ttgcaactgc gtcgatgaat cagcgctatt tctttggcta acctctcttt ggctaatctg 3360 aggtagcagc gttaatcccg ttaccggggc gttgtaatac tcaaagtaag tagggtacta 3420 cccggtttca gcattcagtt tgtccacagt aaaggcggta tccaacgtta ttggtgttgc 3480 gggcaggcgg caaatgaacg tcgttaatag ccagtgcttc agatacgaag ggtgaattca 3540 gttcctgata tggggtgtag gaaagtcctt gggctgaata tcgttgaaca ggatgtcatt 3600 actgtgggca actgatctac acaaggagtg aacaacatga ttttgataga gcacattctg 3660 ggtaatgtga aaaaagatcc ggtttggcgg gaaaaactga aagatgccac tttcgatctt 3720 ttgatcctgg accaacggga agcacaaaaa agccgttgcc gaaaatccag tactcaaggt 3780 ctggatctgg gtatttctct cgaccgcaac gtggtccttg ctgatggtga tgtactggca 3840 tgggatgaag aaaccaatgt ggccgtggtg gtacagatca atctacgtga tgtgatggtg 3900 attgacttga gtgaactgaa aagtcgttca cctgatgaat taattaaaac ctgctttgaa 3960 ctgggacacg cgctgggtaa tcagcattgg aaagcggtga ccaagcataa cgaggtgtat 4020 gtgcctctga ccgtcgcgac aaccatgatg gactccgtca tgaggacgca cggcttccaa 4080 catctccctt ttcgtttcgt gaaaggtgcc gagattttac ctctgctgac gaactccgaa 4140 gcccggctac tgtttggtgg tgctgaggat accgacacgc acgttcatgt tgccagcccc 4200 cttgatgaac ctcatggctc tggtctgcac attcacggta ttcactccca cgaagaaggc 4260 catagtcatg gtgatcacga tcatgaccac agccatagcc atggtgatca tgaccacgac 4320 cataaacact gattcaggca gcgaggcacc gcgatgaacg catcagatct cattcgtatc 4380 atgcaatttg gtgattccgt actgccggtc ggggccttta cgttttccaa tggcgtggaa 4440 tctgccattc aaaccggcat cgttcatgat gtagcaacat tgaaaggctt cgttttgaca 4500 gcgttgaagc aggcggccag ttgtgacggc atgggcgttg ttgtggctca tcgtgctgtt 4560 atggcagatg accgtgacgg tattatccgt gctgattggg cggttaataa tcgtaagtta 4620 aatgaagaaa gccgcctgat ggcaacccgc atgggtaaaa agctggcaga aatgtcgatc 4680 catgtggtgg agcacccatt gatcagctgg tggttggaac aaatcaaaaa tggcaacacg 4740 gcgggcacct atccggtgac tcaagcggtg gttatggcag cacaagggat cgggcaacgg 4800 gaagtggttg tgatgcatca atacggtgtg gcgatgacca ttttaagtgc ggctatgcgc 4860 ttgatgcgcg ttacgcattt cgatacacag catatcttat ttgaactgaa ccatgacatt 4920 gagaaattct gcgatattgc cgaaatcggc gatatcaacc agatgtcttc ttatgtcccg 4980 attgtggatg ttttggccgc cgtacatgtg aaagcccatg ttcgcctctt tagtaactga 5040 gtgaccgcgg tgtgaacgat cgagacatga ataatgtatc gataaaaatg aattcaggat 5100 gctgcggtga ggtgttagcc gagtacctac cccaaatcag ataaaaagaa tgaagaggat 5160 tatcccgtga ccgataaaag cacagcacgt aaaaaaataa cccgtattgg tattggtggt 5220 ccggtaggtt cggggaaaac ggccattatc gaagtcataa ccccgatcct gattaaacga 5280 ggcattaagc cactgattat caccaatgac atcgtgacga ccgaggatgc caaacaggta 5340 aaacggacgc tgaaaggtat tctggacgaa gagaagatcc ttggggtaga aactggcgct 5400 tgcccgcata ccgcagtgcg cgaagacccg agcatgaaca ttgctgcggt agaagagatg 5460 gaagagcgct tccctgaaag cgacctgatt atgattgaaa gcggcgggga taacctgaca 5520 ctgacattca gtcctgcact ggcagacttc tacatctatg ttattgatgt ggctgaaggt 5580 gaaaaaattc ctcgtaaaaa tggccccggc ttggttcagg cagacatttt agtgatcaat 5640 aaaattgacc tggcacctta tgtcggtgcc agcctggatg tcatggagag tgataccaaa 5700 gtcgtgcgcg gcaatcgccc ttatattctg accaattgca aaactggcca gggcattgaa 5760 gaactggtcg atatgattat gcgagatttc ctgtttaccc atgtacagcc ggaaggagaa 5820 caggcatgac agcacagagc cagaatatcg tggagacgcc ttcacgggtt cgcgctcacg 5880 cattaggtgt taacgcgccg gaattagcga aatatcagga tgaaccggcg caaatgcgta 5940 gcggggcggt tgggaaaagt ggctatctga aactgagatt tgccaaacgt gaacattgca 6000 gtattttggc cgaaatggaa aggcgggtac cctcattggt acaaaaagca ctgtactggg 6060 atgaagaaat acctgagtta ccttgtgtca ccatgatttc gacatcaggt tgtattttgc 6120 agggtgatcg gttagctact gatgtgcatg tggaagcggg cgcttgtgct cacgtcacca 6180 cgcagtcagc cacaaaagtt cacatgatga atgcgaacta cgcctcgcag atccagaatt 6240 tcattgtgga ggaaggcggt tatctggaat ttatgccaga cccgctaatt cctcatcgaa 6300 attcccgttt tattactgat accacgatca gcattcatcc aactgcgacc gcgatttatt 6360 ctgaagtgct gatgtccggg cgtaaatatc accatgctga cgaacgattc ggttttgatg 6420 tttattcctc tcgggtggca gcacaaaatc tagcgggcaa agagttgttt gttgagaagt 6480 acgtattaga accaaaagta gaaagccttg acgcagtggg tgttatgcaa acctttgatg 6540 cgtttggtaa cgtgatttta ttaacgccca aagaacatca tgaccgcatt ctggcacggg 6600 ttccggctca ttttgacatc aaaggggggg attgccagcg gcgcgacgcg tctacctaat 6660 gattgtgggt tagtcttcaa ggcgttgggt atcgatagcg ccggtgtaaa ggcagagatt 6720 cgccaatttt ggaagatagc ccgcgaagag attttaggcg tcacattgcc tgaacaattt 6780 ttgtggcgct gattttgctg ttttgatgcg ccattttaag gggagaaaag ggggaataag 6840 tcagtctatt gaatagaggc tgggtaccca gcctcgttta tcagccagtg atccaagcaa 6900 gtgaaagcag ccacatcaat cagtgattcc gggtgagtga gagcagcgaa taccgctgca 6960 g 6961 // |
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