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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF093833; SV 1; linear; genomic DNA; STD; PRO; 1124 BP.
XX
AC   AF093833;
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DT   13-MAY-1999 (Rel. 59, Created)
DT   13-MAY-1999 (Rel. 59, Last updated, Version 1)
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DE   Helicobacter pylori strain UA1210 alpha-1,2-fucosyltransferase gene,
DE   complete cds.
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KW   .
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OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
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RN   [1]
RP   1-1124
RX   DOI; 10.1046/j.1365-2958.1999.01268.x
RX   PUBMED; 10096092.
RA   Wang G., Rasko D.A., Sherburne R., Taylor D.E.;
RT   "Molecular genetic basis for the variable expression of Lewis Y antigen in
RT   Helicobacter pylori: analysis of the alpha (1,2) fucosyltransferase gene";
RL   Mol. Microbiol. 31(4):1265-1274(1999).
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RN   [2]
RP   1-1124
RA   Wang G., Taylor D.E.;
RT   ;
RL   Submitted (24-SEP-1998) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, 1-51 Medical
RL   Science Building, Edmonton, AB T6G 2H7, Canada
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FH   Key             Location/Qualifiers
FH
FT   source          1..1124
FT                   /organism="Helicobacter pylori"
FT                   /strain="UA1210"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:210"
FT   CDS             143..1045
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alpha-1,2-fucosyltransferase"
FT                   /db_xref="GOA:Q9X441"
FT                   /db_xref="InterPro:IPR002516"
FT                   /db_xref="UniProtKB/TrEMBL:Q9X441"
FT                   /protein_id="AAD29869.1"
FT                   /translation="MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDWSDR
FT                   KMQLELFPINLPYASAKEIAIAKMQHLPKLVRDALKCMGFDRVSQEIVFEYEPELLKPS
FT                   RLTYFYGYFQDPRYFDAISPLIKQTFTLPPPPENNKNNNKKEEEYHRKLSLILAAKNSV
FT                   FVHIRRGDYVGIGCQLGIDYQKKALEYMAKRVPNMELFVFCEDLEFTQNLDLGYPFMDM
FT                   TTRNKEEEAYWDMLLMQSCQHGIIANSTYSWWAAYLIENPEKIIIGPKHWLFGHENILC
FT                   KEWVKIESHFEVKSQKYNA"
XX
SQ   Sequence 1124 BP; 358 A; 201 C; 233 G; 332 T; 0 other;
     gaacactcac acgcgtcttt ttcaaataaa aaattcaaat gattttgaaa gcgttacttg        60
     ccccgctttt tgggttttta ttgaaaaagg gctttaaaat aagctaaaat gagcgtttca       120
     tttgacaata taaagggatt gaatggcttt taaggtggtg caaatttgcg ggggacttgg       180
     gaatcaaatg tttcaatacg ctttcgctaa aagtttgcaa aaacactcta atacgcctgt       240
     gctgttagat attacttctt ttgattggag cgataggaaa atgcaattag aacttttccc       300
     tattaatttg ccctatgcga gcgcgaaaga aatcgctata gctaaaatgc aacacctccc       360
     caagctagta agagacgcgc tcaaatgcat ggggtttgat agggtgagtc aagaaatcgt       420
     ttttgaatac gagcctgaat tgttaaagcc aagccgcttg acttattttt atggctattt       480
     tcaagatcca cgatattttg atgctatatc ccctttaatc aagcaaacct tcactctacc       540
     ccccccccca gaaaataata agaataataa taaaaaagag gaagaatacc accgcaagct       600
     ttctttgatt ttagccgcta aaaacagcgt gtttgtgcat ataagaagag gggattatgt       660
     ggggattggc tgtcagcttg gtattgacta tcaaaaaaag gcgcttgagt atatggcaaa       720
     gcgcgtgcca aacatggagc tttttgtgtt ttgcgaagac ttagaattca cgcaaaacct       780
     tgatcttggc taccctttta tggacatgac cactagaaat aaagaagaag aggcgtattg       840
     ggatatgctg ctcatgcaat cctgtcaaca tggcattatc gctaatagca cttatagctg       900
     gtgggcggct tatttgatag aaaatccaga aaaaatcatc attggcccca aacactggct       960
     ttttgggcat gaaaatatcc tttgtaagga atgggtgaaa atagaatccc attttgaggt      1020
     gaaatcccaa aagtataacg cttaaagcgg cttaaaaaag gggcttataa gatttaaatc      1080
     tttgatttta gatcggattt ctttatagcg agcgtctaat tcta                       1124
//
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