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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF093831; SV 1; linear; genomic DNA; STD; PRO; 1037 BP.
XX
AC   AF093831;
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DT   13-MAY-1999 (Rel. 59, Created)
DT   13-MAY-1999 (Rel. 59, Last updated, Version 1)
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DE   Helicobacter pylori strain UA1218 alpha-1,2-fucosyltransferase gene,
DE   complete cds.
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KW   .
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OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
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RN   [1]
RP   1-1037
RX   DOI; 10.1046/j.1365-2958.1999.01268.x
RX   PUBMED; 10096092.
RA   Wang G., Rasko D.A., Sherburne R., Taylor D.E.;
RT   "Molecular genetic basis for the variable expression of Lewis Y antigen in
RT   Helicobacter pylori: analysis of the alpha (1,2) fucosyltransferase gene";
RL   Mol. Microbiol. 31(4):1265-1274(1999).
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RN   [2]
RP   1-1037
RA   Wang G., Taylor D.E.;
RT   ;
RL   Submitted (24-SEP-1998) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, 1-51 Medical
RL   Science Building, Edmonton, AB T6G 2H7, Canada
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FH   Key             Location/Qualifiers
FH
FT   source          1..1037
FT                   /organism="Helicobacter pylori"
FT                   /strain="UA1218"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:210"
FT   CDS             58..957
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alpha-1,2-fucosyltransferase"
FT                   /db_xref="GOA:Q9X439"
FT                   /db_xref="InterPro:IPR002516"
FT                   /db_xref="UniProtKB/TrEMBL:Q9X439"
FT                   /protein_id="AAD29867.1"
FT                   /translation="MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDTTSFDWSNR
FT                   KMQLELFPIDLPYASEKEIAIAKMQHLPKLVREALKYIGFDRVSQEIVFEYEPKLLKPS
FT                   RLTYFFGYFQDPRYFDAISPLIKKTLTLPPPPRKGNNKKKEEEYHRKLSLILAAKNGVF
FT                   VHIRRGDYVGIGCQLGIDYQKKALEYMAKRVPNMELFVFCEDLEFTQNLDLGYPFTDMT
FT                   TRDKDEEAYWDMLLMQSCQHGIIANSTYSWWAAYLINNPEKIIIGPKHWLFGHENILCK
FT                   EWVKIESHFEVKSQKYNA"
XX
SQ   Sequence 1037 BP; 332 A; 189 C; 216 G; 300 T; 0 other;
     gaacactcac acgcgtcttt ttcaaataaa aaattcaaat gatttgaaag ggattgaatg        60
     gcttttaagg tggtgcaaat ttgtgggggg cttgggaatc aaatgttcca atacgctttc       120
     gctaaaagtt tgcaaaaaca ctctaatacg cctgtgctgt tagatacaac ttcttttgat       180
     tggagcaata ggaaaatgca attagagctt ttccctattg atttgcccta tgcgagtgaa       240
     aaagaaatcg ctatagctaa aatgcaacac ctccccaagc tagtaagaga ggcgctcaaa       300
     tacataggat ttgacagggt gagtcaagaa atcgtttttg aatacgagcc taaattgtta       360
     aagccaagcc gtttgactta tttttttggc tatttccaag atccacgata ttttgatgct       420
     atatcccctt taattaaaaa aaccttaacc ttaccccccc ccccccgaaa aggaaataat       480
     aaaaaaaaag aggaagaata ccaccgtaag ctttctttga ttttagccgc taaaaacggc       540
     gtgtttgtgc atataagaag aggggattat gtggggattg gctgtcagct tggtattgat       600
     tatcaaaaaa aggcgcttga gtatatggca aagcgcgtgc caaacatgga gctttttgtg       660
     ttttgcgaag atttggaatt cacgcaaaac cttgatcttg gctacccttt tacggacatg       720
     accactaggg ataaagacga agaagcgtat tgggacatgc tgctcatgca atcttgtcag       780
     catggcatta tcgctaacag cacttatagc tggtgggcgg cttatttgat aaacaatcca       840
     gaaaaaatca ttattggccc caaacactgg ctttttgggc atgagaatat cctttgtaag       900
     gaatgggtga aaatagaatc ccattttgag gtaaaatccc aaaagtataa cgcttaaact       960
     aactcaaaaa agggcttact agaggtttaa atctttgatt ttagatcgga tttctttata      1020
     gcgagcgtct aattcta                                                     1037
//
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