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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF093828; SV 1; linear; genomic DNA; STD; PRO; 1122 BP.
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AC   AF093828;
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DT   13-MAY-1999 (Rel. 59, Created)
DT   13-MAY-1999 (Rel. 59, Last updated, Version 1)
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DE   Helicobacter pylori strain UA1234 alpha-1,2-fucosyltransferase gene,
DE   complete cds.
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KW   .
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OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
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RN   [1]
RP   1-1122
RX   DOI; 10.1046/j.1365-2958.1999.01268.x
RX   PUBMED; 10096092.
RA   Wang G., Rasko D.A., Sherburne R., Taylor D.E.;
RT   "Molecular genetic basis for the variable expression of Lewis Y antigen in
RT   Helicobacter pylori: analysis of the alpha (1,2) fucosyltransferase gene";
RL   Mol. Microbiol. 31(4):1265-1274(1999).
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RN   [2]
RP   1-1122
RA   Wang G., Taylor D.E.;
RT   ;
RL   Submitted (24-SEP-1998) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, 1-51 Medical
RL   Science Building, Edmonton, AB T6G 2H7, Canada
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FH   Key             Location/Qualifiers
FH
FT   source          1..1122
FT                   /organism="Helicobacter pylori"
FT                   /strain="UA1234"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:210"
FT   CDS             142..1041
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="alpha-1,2-fucosyltransferase"
FT                   /db_xref="GOA:Q9X435"
FT                   /db_xref="InterPro:IPR002516"
FT                   /db_xref="UniProtKB/TrEMBL:Q9X435"
FT                   /protein_id="AAD29863.1"
FT                   /translation="MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDWSNR
FT                   KMQLELFPIDLPYASEKEIAIAKMQHLPKLVRNVLKCMGFDRVSQEIVFEYEPKLLKTS
FT                   RLTYFYGYFQDPRYFDAISPLIKQTFTLPPPPENGNNKKKEEEYHRKLALILAAKNSVF
FT                   VHIRRGDYVGIGCQLGIDYQKKALEYMAKRVPNMELFVFCEDLEFTQNLDLGYPFMDMT
FT                   TRDKEEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPEKIIIGPKHWLFGHENILCK
FT                   EWVKIESHFEVKSQKYNA"
XX
SQ   Sequence 1122 BP; 360 A; 198 C; 235 G; 329 T; 0 other;
     gaacactcac acgcgtcttt ttcaaataaa aaattcaaat gatttgaaag cgttactcac        60
     cccgcttttt aggcttttat tgaaaaaggg ctttaaaatg agctaaaata ggcgttttat       120
     ttgagaaaac aaagggattg aatggctttt aaggtggtgc aaatttgcgg ggggcttggg       180
     aatcaaatgt ttcaatacgc tttcgctaaa agtttgcaaa aacactctaa tacgcctgtg       240
     ctgttagata ttacttcttt tgattggagt aatagaaaaa tgcaattaga acttttccct       300
     attgatttgc cctatgcgag tgaaaaagaa atcgctatag ctaaaatgca acacctcccc       360
     aagctagtaa gaaatgtgct caaatgcatg gggtttgata gggtgagtca agaaatcgtt       420
     tttgaatacg agcctaaatt gttaaagaca agccgcttga cttattttta tggctatttt       480
     caagatccac gatattttga tgctatatcc cctttaatca agcaaacctt caccctaccc       540
     cccccccccg aaaatggaaa taataaaaaa aaagaggaag aataccaccg caagcttgct       600
     ttgattttag ccgctaaaaa cagcgtgttt gtgcatataa gaagagggga ttatgtgggg       660
     attggctgtc agcttggtat tgattatcaa aaaaaggcgc ttgagtatat ggcaaagcgc       720
     gtgccaaaca tggagctttt tgtgttttgc gaagacttag aattcacgca aaatcttgat       780
     cttggctacc cttttatgga catgaccact agggataaag aagaagaagc gtattgggat       840
     atgctgctca tgcaatcttg caagcatggc attatcgcta acagcactta tagctggtgg       900
     gcggcctatt tgataaacaa tccagaaaaa atcattattg gccccaaaca ctggcttttt       960
     gggcatgaga atatcctttg taaggaatgg gtgaaaatag aatcccattt tgaggtgaaa      1020
     tcccaaaagt ataacgctta aagcggctta aaaaaagggc ttactagagg tttaaatctt      1080
     tgattttaga tcggatttct ttatagcgag cgtctaattc ta                         1122
//
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