EBI Dbfetch

ID   AF078039; SV 1; linear; genomic DNA; STD; PRO; 1855 BP.
XX
AC   AF078039;
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Caldicellulosiruptor sp. Tok7B.1 glycosyl hydrolase 5 and glycosyl
DE   hydrolase 6 genes, partial cds.
XX
KW   .
XX
OS   Caldicellulosiruptor sp. Tok7B.1
OC   Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
OC   Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.
XX
RN   [1]
RP   1-1855
RX   DOI; 10.1007/s002849910066
RX   PUBMED; 10706665.
RA   Gibbs M.D., Reeves R.A., Farrington G.K., Anderson P., Williams D.P.,
RA   Bergquist P.L.;
RT   "Multidomain and multifunctional glycosyl hydrolases from the extreme
RT   thermophile Caldicellulosiruptor isolate Tok7B.1";
RL   Curr. Microbiol. 40(5):333-340(2000).
XX
RN   [2]
RP   1-1855
RA   Gibbs M.D., Reeves R.A., Farrington G.K., Anderson P., Williams D.P.,
RA   Bergquist P.L.;
RT   ;
RL   Submitted (27-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1855
FT                   /organism="Caldicellulosiruptor sp. Tok7B.1"
FT                   /isolate="Tok7B.1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:80339"
FT   CDS             <1..630
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="glycosyl hydrolase 5"
FT                   /note="ORF5; multidomain"
FT                   /db_xref="GOA:Q9AQG9"
FT                   /db_xref="UniProtKB/TrEMBL:Q9AQG9"
FT                   /protein_id="AAK06389.1"
FT                   /translation="DPTYKTTQKGQITAGENSWINQWFPEYLPLLPNIKADIDKYYPGT
FT                   KLAITEFDYGGKDHISGGIALADVLGIFGKYGVYMAARWGDSGSYAQAAYNIYLNYDGK
FT                   GSRYGSTCVSAETTDVENMPVYASIEGEDDSTVHIILINRNYDRKLKAEIKMNNTRVYT
FT                   GGEIYGFDSTSSQIRKMGVLSNIQNNTITIEVPNLTVYHIVLTSSK"
FT   misc_feature    1..627
FT                   /note="Region: family 44 glycosyl hydrolase domain"
FT   CDS             865..>1855
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="glycosyl hydrolase 6"
FT                   /note="ORF6; multidomain"
FT                   /db_xref="GOA:Q9AQG8"
FT                   /db_xref="InterPro:IPR013517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9AQG8"
FT                   /protein_id="AAK06390.1"
FT                   /translation="MFVKEKKRINVYLALIIFVVNIVLFNGQINMNKDNLAMAATGSQI
FT                   EKLNRGLIAVKVTNGVFLSWRMFGSDPANIGFNIYRNGVKITKTPIQDSTNYIDADGTT
FT                   NSRYYVRAVINGAEVEQSEEVSVLNNNYIEIKLNKPANSPLGASYSPNDVSVGDLDGDG
FT                   EYEIVLKWDPSNSXXXSLSGYTSNVFXDXYKLNGKFLWRIDLGRNIRAGAHYTQFIVYD
FT                   LDGDGKAEVACXTADGTIDGQGNVIGDPNADWRNSSGYILSGPEYLTVFEGATGRALKT
FT                   VNYIPPRGNVSSWGDSYGNRVDRFLAXVAYLDGKRPSLIMCRGYYTKTY"
FT   misc_feature    865..1855
FT                   /note="function unknown; Region: N-terminal domain"
XX
SQ   Sequence 1855 BP; 653 A; 239 C; 426 G; 530 T; 7 other;
     gatccgacat ataaaaccac ccagaaaggt cagataacag cgggagaaaa tagctggata        60
     aaccaatggt ttccagagta tcttccactg cttcccaata taaaggcaga tatagacaag       120
     tattatcctg gtaccaaact tgctataact gagtttgatt atggagggaa ggaccatata       180
     tcgggaggaa tagctttagc agatgtgtta gggatattcg gcaagtatgg agtatacatg       240
     gcagcaagat ggggagattc ggggagctat gcacaggcgg cgtacaacat ttatctcaac       300
     tatgatggga aaggttcgag atacggttca acgtgtgtga gcgctgagac aactgacgtt       360
     gagaacatgc cggtatatgc ttcaattgag ggagaagatg attcgactgt gcatattata       420
     ttaattaaca ggaattatga caggaaactg aaggcagaga taaagatgaa taataccagg       480
     gtatacacag gtggagagat atacggattt gacagtacaa gctctcagat caggaagatg       540
     ggagtgctca gtaatataca aaacaacaca atcaccatag aagttccaaa tctgacggta       600
     taccatattg ttttaacttc ttcaaagtag attaaagaat aaaaatggag acactgctgc       660
     atggtaaaag ttgagatgtg cagcagtgtc tcattttaaa ttgttgggtt ggatataaag       720
     tgaatatatt ttacactttt cagaatgcgt ataataaatt taaattaata aagtttttat       780
     attcaatata ccacctctat caattaagtt ttctgttatt tattacaata tgaatgttaa       840
     gaaactattt tggaggtgaa ttttatgttt gtaaaggaga agaaaagaat aaatgtgtat       900
     ttagcattaa ttatttttgt tgtaaatatt gtcttattta atggacagat aaatatgaac       960
     aaagataatt tagcaatggc agcaactgga agtcaaattg agaagttaaa tcggggacta      1020
     atagctgtta aagtgacaaa cggagtattt ttgagctgga gaatgtttgg gtcagatcca      1080
     gcaaatattg ggtttaatat ttacagaaat ggagtgaaga taactaaaac accaattcag      1140
     gacagtacaa attatattga tgctgatgga acaaccaatt cgagatatta tgtaagagca      1200
     gtaataaatg gggcagaggt agaacaatct gaagaagtaa gtgtgcttaa taacaattat      1260
     attgaaatta aattaaataa accagcgaat tctccactcg gtgcttcata ttcgccaaat      1320
     gatgtaagtg taggcgattt ggatggtgat ggagaatatg agattgtttt aaaatgggat      1380
     ccaagtaatt catwagasma gtcactatcc ggatatacaa gcaacgtgtt tttngacgmt      1440
     tacaaattaa atggcaaatt cttatggaga attgatttgg gtagaaatat aagagcaggg      1500
     gcacattata cacaatttat agtatatgat ttagatggtg acggaaaagc agaagttgca      1560
     tgtaawacgg ctgatgggac aatagatgga cagggaaatg ttataggtga tcctaatgct      1620
     gattggagaa attcaagtgg ttacattttg tcaggtcctg aatatttgac agtatttgaa      1680
     ggtgcaacag gaagggcact gaaaactgtt aattatattc ctccgcgggg aaatgtttca      1740
     tcatggggag actcatatgg gaacagagtt gatagatttt tggctwcagt ggcttatctg      1800
     gatgggaaaa ggccaagtct tattatgtgc cgaggatatt atacaaagac atata           1855
//