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EBI DbfetchID AF078038; SV 1; linear; genomic DNA; STD; PRO; 3262 BP. XX AC AF078038; XX DT 12-FEB-2001 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Caldicellulosiruptor sp. Tok7B.1 glycosyl hydrolase 5 gene, partial cds. XX KW . XX OS Caldicellulosiruptor sp. Tok7B.1 OC Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; OC Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor. XX RN [1] RP 1-3262 RX DOI; 10.1007/s002849910066 RX PUBMED; 10706665. RA Gibbs M.D., Reeves R.A., Farrington G.K., Anderson P., Williams D.P., RA Bergquist P.L.; RT "Multidomain and multifunctional glycosyl hydrolases from the extreme RT thermophile Caldicellulosiruptor isolate Tok7B.1"; RL Curr. Microbiol. 40(5):333-340(2000). XX RN [2] RP 1-3262 RA Gibbs M.D., Reeves R.A., Farrington G.K., Anderson P., Williams D.P., RA Bergquist P.L.; RT ; RL Submitted (27-OCT-1999) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia XX FH Key Location/Qualifiers FH FT source 1..3262 FT /organism="Caldicellulosiruptor sp. Tok7B.1" FT /isolate="Tok7B.1" FT /mol_type="genomic DNA" FT /db_xref="taxon:80339" FT misc_feature 274..2580 FT /note="Region: endoglucanase domain" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 274..>3262 FT /codon_start=1 FT /transl_table=11 FT /product="glycosyl hydrolase 5" FT /note="ORF5; multidomain" FT /db_xref="GOA:Q9AQH0" FT /db_xref="HSSP:1NBC" FT /db_xref="InterPro:IPR001956" FT /db_xref="InterPro:IPR002860" FT /db_xref="InterPro:IPR008965" FT /db_xref="UniProtKB/TrEMBL:Q9AQH0" FT /protein_id="AAK06388.1" FT /translation="MKRLISLFSILLILNFLIAEFLQIGAKADTGIAVQPYVWKNVKIE FT GGGGFITGIVFNPKEKNLVYVRTDIGGAYRSTDGGNTWTQLMDWVSFDDWNLLGVESIA FT TDPVDPNXVILACQGTYTNSWTDMNGAILRSTDEGDTFEITPLPFXLGGNMPXRNLGER FT LAIDPNNNRILYLGTREGXGLWKSEDYGVSWKKVTSFPNPGTYIEDPNCPNDYLNHITG FT VVWVVFDPTSGRPGEGXKIIYVGVADKTTSIYYTKDGGQTWQALPGQPTGLLPQRAKLS FT SDGMLYITYSNTQGPYNGDYGEVWRYNTKTGEWKNISPMAAQDTYFGYGGLAVDAQNPK FT VVMVAALSSWWPDTYIWRSIDGGETWKCIWEWNGYPNRTLHYNMDISAAPWLNFGXTBP FT TPPEVSPKLGWMVGTLEIDPFNSDXMLYGTGAXLYGCDDLTNWDKGQNITIKVKAIGIE FT ETSVQALISPPVGPHLFSALGDIAGFRHEDLEKAPNWTYVQPNMGTTTDIDFAELNPNF FT MVRVGNVDKQWNPNTNRIGFSYDGGKSWFQGNTEPQGTSEGGTVAAAADGSAVVWAPKG FT AKVCYSTDNGNKWVECANVPSEAIVYSDRVNPNKFYAFKNGKFYISADKGKTFIESPAA FT GLPISGNFKTVPGIEGDIWLVGNNGMWHSTDGGYSFVKISGVEDAASIGFGKPAEGETY FT PAIYTYAKINGVRGIFRSDDCDKTWIRINDDKHQFGCANADITGDPRVYGRVFVATNGL FT GIKWGEIAYSNISPSATPTSTPSFTPTPTPTATITSTPAPTSTPTPTPTPTPTVTATPT FT PTPTPTVTVTMTPTPTPTPTPTPTGTPGTGSGLKVLYKNNETSASAGSIRPWFKIVNGG FT SSSVDLSRVKIRYWYTVDGDKPQSAVCDWAQIGASNVTFNFVKLSSGVSGADYYLEVGF FT SSGAGQLQPGKDTGDIQVRFNKNDWSNYNQADDWSWLQSMTDYGENAKVTLYVDGVLVW FT GQEPGGA" FT misc_feature 2581..2790 FT /note="PT-linker" FT misc_feature 2791..>3262 FT /note="type IIIb cellulose binding site" XX SQ Sequence 3262 BP; 1056 A; 529 C; 794 G; 871 T; 12 other; ccagtccagc aggaggtgat aaaaaatatc caacaaacta aaattagact taactttttt 60 ctgattttag tttaccaaag ataaagggta aatttaagct gcagcagtca attttaatat 120 tcaatttttg agaagtgggt gtttagagaa gaggatttaa tttaacaaat ttccggtaat 180 caattggtac tgataattaa atgtaccaat tgagatatga agttttattt aatttgaatt 240 tgataattat atgatatgag gaggtaatat tttatgaaac ggttaatttc attattttct 300 attttgttga tattgaactt cctaatagca gaatttttac aaattggtgc aaaggctgat 360 acaggcattg ctgttcagcc atatgtgtgg aagaatgtta aaattgaagg tggaggaggt 420 tttatcactg gaatagtgtt taacccgaaa gagaaaaatc ttgtttacgt taggacagat 480 ataggaggag cttaccgtag tacagacggt ggcaatacat ggacacaact tatggactgg 540 gttagttttg atgattggaa tttgctgggt gtagagagca ttgcmacaga tcctgttgat 600 cctaatcwgg ttatattggc ctgccagggg acttatacca atagctggac agatatgaat 660 ggtgctattt tgcgttctac tgacgaagga gatacttttg aaatcactcc actycccttt 720 raattgggtg gaaacatgcc rkgaaggaat ctgggagaaa ggttagctat tgatccaaac 780 aataatagaa tattatactt aggaacaaga gaaggamatg ggttatggaa aagtgaagat 840 tatggagtgt catggaaaaa agtaacaagt tttcctaacc caggcacata tattgaagat 900 ccaaactgcc ccaacgatta tttgaaccat ataacaggtg tggtctgggt ggtatttgat 960 cctacaagtg gtaggcctgg tgagggaakc aagataattt atgtgggtgt tgcagataaa 1020 accacaagca tctattatac aaaagacggt ggtcagacat ggcaagcatt accaggacag 1080 ccaactggct tacttcctca gcgtgcaaaa ttaagttctg atgggatgtt atatataact 1140 tatagtaaca ctcaggggcc atataatggt gattatggag aagtatggag atacaatact 1200 aagaccggag aatggaaaaa tataagtcca atggctgctc aagatactta ttttggatat 1260 ggtggattgg ctgtagacgc ccagaatccg aaagtagtga tggtagcagc tcttagctca 1320 tggtggccag atacctatat ttggagaagt atcgatggtg gcgaaacgtg gaaatgtatt 1380 tgggaatgga atggctatcc taatagaaca ttgcattata acatggatat ttctgcagct 1440 ccttggctaa actttggaaw tactratcct acaccacctg aagtaagccc aaaacttggc 1500 tggatggttg gaacacttga aatagaccca tttaattcag ataraatgct ttatggaaca 1560 ggagctamat tgtatggatg cgatgatttg acaaattggg acaaagggca aaatatcacc 1620 attaaagtca aggctatagg aattgaagaa acttcagtcc aagcactgat aagcccacca 1680 gttggaccac atttattcag tgcactggga gatatagcgg gattcagaca tgaagacttg 1740 gagaaagcac ctaattggac atatgttcag cctaatatgg ggactactac tgatattgat 1800 tttgctgagt taaatccaaa ttttatggtt cgtgtaggga atgttgataa acagtggaat 1860 ccaaatacta acagaattgg tttctcatat gatggtggaa aatcatggtt tcagggaaat 1920 actgaacctc aaggaacaag cgaaggtggt acagttgcag ctgctgcaga tggtagtgct 1980 gttgtttggg caccaaaagg agcgaaagta tgctattcta cagataacgg aaacaaatgg 2040 gttgaatgcg caaatgtacc ttcagaagct attgtatatt ctgacagagt aaatccaaat 2100 aagttttatg catttaagaa tggcaaattt tatataagtg ctgataaagg aaaaacattt 2160 atcgaaagtc ctgctgctgg tttaccaata tcaggaaatt tcaaaactgt tccaggtata 2220 gaaggtgata tctggctagt tggtaataat gggatgtggc actcaactga tggtggatat 2280 tcatttgtaa aaatttcagg tgttgaggat gcagcgagta taggatttgg taaacctgct 2340 gaaggagaaa catatcctgc aatttatact tatgcaaaaa ttaatggagt aagaggtata 2400 tttagatctg atgactgtga taaaacgtgg ataagaataa atgacgacaa acatcagttt 2460 ggttgtgcga atgcagacat aactggagat ccacgcgtgt acggtcgagt atttgttgca 2520 acaaacggcc tgggtataaa atggggtgaa attgcttatt caaatatttc gccatcagca 2580 actccaacat caacaccaag tttcaccccg acaccgactc caacagcaac tattacatcc 2640 acacctgcac caacatcaac accaacacca accccgaccc caacaccaac agtgacagca 2700 acgccgacgc caacgccgac gcctacagtg acggttacta tgactccgac accgacacca 2760 acaccaacgc cgacaccaac agggacacct ggtacgggaa gtggtttgaa ggtactgtac 2820 aagaacaatg agacgagtgc gagtgcaggt tctataaggc cgtggtttaa gatagtgaat 2880 ggaggcagca gcagtgttga tcttagcagg gttaagataa gatactggta cacagtggat 2940 ggtgacaagc cacagagtgc ggtatgtgac tgggcacaga taggtgcaag caatgtgaca 3000 ttcaattttg tgaagcttag cagcggagtg agtggagcgg attattactt ggaggtagga 3060 tttagcagtg gagctgggca gttgcagcct ggtaaggaca caggggatat acaggtaagg 3120 tttaacaaga atgactggag caattacaat caggcagacg actggtcatg gttgcagagc 3180 atgacggatt atggagagaa tgcgaaggtg acgctgtatg tagatggtgt tctggtatgg 3240 gggcaggagc cgggaggagc tc 3262 // |
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