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EBI Dbfetch

ID   AF072734; SV 1; linear; genomic DNA; STD; PRO; 2600 BP.
XX
AC   AF072734;
XX
DT   13-JUL-1998 (Rel. 56, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Clostridium acetobutylicum NfrC homolog (nfrC) gene, partial cds; and
DE   thiolase A (thlA) gene, complete cds.
XX
KW   .
XX
OS   Clostridium acetobutylicum
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
XX
RN   [1]
RP   1-2600
RX   DOI; 10.1016/0168-6445(95)00006-X
RX   PUBMED; 7576767.
RA   Durre P., Fischer R.J., Kuhn A., Lorenz K., Schreiber W.,
RA   Sturzenhofecker B., Ullmann S., Winzer K., Sauer U.;
RT   "Solventogenic enzymes of Clostridium acetobutylicum: catalytic properties,
RT   genetic organization, and transcriptional regulation";
RL   FEMS Microbiol. Rev. 17(3):251-262(1995).
XX
RN   [2]
RP   1-2600
RX   PUBMED; 11075929.
RA   Winzer K., Lorenz K., Zickner B., Durre P.;
RT   "Differential regulation of two thiolase genes from Clostridium
RT   acetobutylicum DSM 792";
RL   J. Mol. Microbiol. Biotechnol. 2(4):531-541(2000).
XX
RN   [3]
RP   1-2600
RA   Winzer K., Lorenz K., Durre P.;
RT   ;
RL   Submitted (21-JUN-1998) to the EMBL/GenBank/DDBJ databases.
RL   Pharmaceutical Sciences, University of Nottingham, University Park,
RL   Nottingham Ng7 2RD, United Kingdom
XX
DR   CABRI; DSM 792.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2600
FT                   /organism="Clostridium acetobutylicum"
FT                   /strain="DSM 792"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1488"
FT   CDS             <1..731
FT                   /codon_start=3
FT                   /transl_table=11
FT                   /gene="nfrC"
FT                   /product="NfrC homolog"
FT                   /note="similar to UDP-N-acetylglucosamine-2-epimerases"
FT                   /db_xref="GOA:P45360"
FT                   /db_xref="HSSP:1F6D"
FT                   /db_xref="InterPro:IPR003331"
FT                   /db_xref="UniProtKB/Swiss-Prot:P45360"
FT                   /protein_id="AAC26022.1"
FT                   /translation="VADLHFAPTLGSKKNLLREAVNEKNIFITGNTVVDAMNHTVEKDY
FT                   VFENDELNKLDYKNKKVIMVTAHRRENWGKGIENICTALRRIAEENEDVEIVYLVHLNP
FT                   VVKDVVYNNLNGMKGVHLLPPLDTKETHNLMNKCFMVMADSGGLQEEAPHLGKPVLVLR
FT                   DVTERPEAVEAGTVKLVGTDIKKIVDEAYKIMKDEEEYEKMSKAINPYGDGKASDRIVD
FT                   AILYHFGVLKDRPDEFSPKK"
FT   terminator      740..761
FT                   /gene="nfrC"
FT   mRNA            956..2294
FT                   /gene="thlA"
FT                   /product="thiolase A"
FT   RBS             1043..1048
FT                   /gene="thlA"
FT   CDS             1058..2236
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="thlA"
FT                   /product="thiolase A"
FT                   /note="acetyl coenzyme A acetyltransferase"
FT                   /db_xref="GOA:P45359"
FT                   /db_xref="HSSP:1M3K"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="UniProtKB/Swiss-Prot:P45359"
FT                   /protein_id="AAC26023.1"
FT                   /translation="MKEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKP
FT                   EDVNEVILGNVLQAGLGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKA
FT                   GDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDAFNDYHMGITAEN
FT                   IAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGETVVDTDEHPRFG
FT                   STIEGLAKLKPAFKKDGTVTAGNASGLNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSA
FT                   GVDPAIMGYGPFYATKAAIEKAGWTVDELDLIESNEAFAAQSLAVAKDLKFDMNKVNVN
FT                   GGAIALGHPIGASGARILVTLVHAMQKRDAKKGLATLCIGGGQGTAILLEKC"
FT   terminator      2248..2294
FT                   /gene="thlA"
XX
SQ   Sequence 2600 BP; 1016 A; 296 C; 534 G; 754 T; 0 other;
     gcgttgctga tttgcatttt gcaccaacac ttggttctaa gaaaaatctt ttaagagaag        60
     cagttaatga aaagaatatt tttattacag gaaataccgt tgtagatgca atgaatcata       120
     cggttgaaaa agattatgta tttgaaaatg atgaattgaa taaattagac tataaaaata       180
     agaaagttat aatggtaact gctcatagac gtgagaattg gggaaaggga atagaaaaca       240
     tatgtacagc attaagaaga attgctgaag aaaatgaaga tgttgagata gtttatctag       300
     tacacttgaa tcctgtggtg aaagatgttg tatataataa tttgaatggt atgaaagggg       360
     tacacttgct tcctccactt gatacaaagg aaactcataa tttaatgaat aaatgcttta       420
     tggtaatggc tgactcaggt ggtcttcaag aagaggcacc tcatcttgga aagcctgtac       480
     ttgttttaag agatgttact gaaagaccag aagcagttga ggcaggaacg gtaaaattag       540
     taggaactga tattaaaaag atagtagacg aagcctataa aataatgaaa gatgaagaag       600
     aatatgaaaa aatgagtaag gcaataaatc catatggtga tggaaaggct tcagatagaa       660
     tagttgatgc tatattgtat cattttggag tattaaagga tagaccagat gaattttcac       720
     ctaaaaagta atacatgagc attctaaaag aatttagaat gaagtttctt atgcacaagt       780
     attttttatt acattaatat agttaaaata taaacttatg tatttatgct aaaacatgat       840
     tttaaagggg ttagcatatg cataagttta atttttttgt taaaaaatat taaactttgt       900
     gtttttttta acaaaatata ttgataaaaa taatgatagt gggtataatt aagttgttag       960
     agaaaacgta taaattaggg ataaactatg gaacttatga aatagattga aatggtttat      1020
     ctgttacccc gtatcaaaat ttaggaggtt agttagaatg aaagaagttg taatagctag      1080
     tgcagtaaga acagcgattg gatcttatgg aaagtctctt aaggatgtac cagcagtaga      1140
     tttaggagct acagctataa aggaagcagt taaaaaagca ggaataaaac cagaggatgt      1200
     taatgaagtc attttaggaa atgttcttca agcaggttta ggacagaatc cagcaagaca      1260
     ggcatctttt aaagcaggat taccagttga aattccagct atgactatta ataaggtttg      1320
     tggttcagga cttagaacag ttagcttagc agcacaaatt ataaaagcag gagatgctga      1380
     cgtaataata gcaggtggta tggaaaatat gtctagagct ccttacttag cgaataacgc      1440
     tagatgggga tatagaatgg gaaacgctaa atttgttgat gaaatgatca ctgacggatt      1500
     gtgggatgca tttaatgatt accacatggg aataacagca gaaaacatag ctgagagatg      1560
     gaacatttca agagaagaac aagatgagtt tgctcttgca tcacaaaaaa aagctgaaga      1620
     agctataaaa tcaggtcaat ttaaagatga aatagttcct gtagtaatta aaggcagaaa      1680
     gggagaaact gtagttgata cagatgagca ccctagattt ggatcaacta tagaaggact      1740
     tgcaaaatta aaacctgcct tcaaaaaaga tggaacagtt acagctggta atgcatcagg      1800
     attaaatgac tgtgcagcag tacttgtaat catgagtgca gaaaaagcta aagagcttgg      1860
     agtaaaacca cttgctaaga tagtttctta tggttcagca ggagttgacc cagcaataat      1920
     gggatatgga cctttctatg caacaaaagc agctattgaa aaagcaggtt ggacagttga      1980
     tgaattagat ttaatagaat caaatgaagc ttttgcagct caaagtttag cagtagcaaa      2040
     agatttaaaa tttgatatga ataaagtaaa tgtaaatgga ggagctattg cccttggtca      2100
     tccaattgga gcatcaggtg caagaatact cgttactctt gtacacgcaa tgcaaaaaag      2160
     agatgcaaaa aaaggcttag caactttatg tataggtggc ggacaaggaa cagcaatatt      2220
     gctagaaaag tgctagaaag tattgttaaa aataactctg tagaattata aattagttct      2280
     acagagttat ttttaaaaaa attctaaact tatgtataac aaatacgata agaatgtaga      2340
     attaaaacta aagacagttc aatttctttt agaataattt agttagtgtg gtaaaaaaat      2400
     gtcataatga tatttatgtt gaaatttgta taaaattcag aaaatgaata tattttatca      2460
     attttcagtc atttgaaaga ttatgaggct aatgcagtac taggcgtaaa ttgaatttat      2520
     aattactata gcgataagaa atggcctaaa aacgtttgca gtaatgaaag aaccgtaaat      2580
     attataaaaa aaatcttaaa                                                  2600
//


  
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