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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF061757; SV 1; linear; genomic DNA; STD; PRO; 1579 BP.
XX
AC   AF061757;
XX
DT   13-MAY-1998 (Rel. 55, Created)
DT   13-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Pseudomonas aeruginosa aspartokinase (lysC) gene, partial cds; and carbon
DE   storage regulator (csrA) gene, complete cds.
XX
KW   .
XX
OS   Pseudomonas aeruginosa
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-1579
RA   Hindle Z., Throup J.P., Francis K.P., Bycroft B.W., Williams P.,
RA   Stewart G.S.A.B.;
RT   ;
RL   Submitted (27-APR-1998) to the EMBL/GenBank/DDBJ databases.
RL   Department of Pharmaceutical Sciences, University of Nottingham, University
RL   Park, Nottingham NG7 2RD, UK
XX
DR   RFAM; RF00005; tRNA.
DR   StrainInfo; 345068; PA01.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1579
FT                   /organism="Pseudomonas aeruginosa"
FT                   /strain="PA01"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:287"
FT   CDS             <1..650
FT                   /codon_start=3
FT                   /transl_table=11
FT                   /gene="lysC"
FT                   /product="aspartokinase"
FT                   /db_xref="GOA:O69077"
FT                   /db_xref="InterPro:IPR001048"
FT                   /db_xref="InterPro:IPR001341"
FT                   /db_xref="InterPro:IPR002912"
FT                   /db_xref="InterPro:IPR005260"
FT                   /db_xref="InterPro:IPR018042"
FT                   /db_xref="UniProtKB/Swiss-Prot:O69077"
FT                   /protein_id="AAC16241.1"
FT                   /translation="EEMLEMASLGSKVLQIRAVEFAGKYNVPLRVLHSFQEGPGTLITI
FT                   DDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISAANVEVDMIVQNVAH
FT                   DNTTDFTFTVHRNDYLNALEILKQTAANIGAREAIGDTNIAKVSIVGVGMRSHAGVASR
FT                   MFEALAKESINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELDAPARQGE"
FT   CDS             835..1020
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="csrA"
FT                   /product="carbon storage regulator"
FT                   /db_xref="GOA:O69078"
FT                   /db_xref="InterPro:IPR003751"
FT                   /db_xref="PDB:1VPZ"
FT                   /db_xref="UniProtKB/Swiss-Prot:O69078"
FT                   /protein_id="AAC16242.1"
FT                   /translation="MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHRE
FT                   EIYQRIQKEKDQEPNH"
FT   misc_feature    1085..1127
FT                   /note="similar to serV tRNA gene of Escherichia coli"
FT   misc_feature    1297..1355
FT                   /note="similar to argV(alpha) tRNA gene of Escherichia
FT                   coli"
FT   misc_feature    1485..1543
FT                   /note="similar to argV(beta) tRNA gene of Escherichia coli"
XX
SQ   Sequence 1579 BP; 368 A; 440 C; 458 G; 313 T; 0 other;
     tcgaggaaat gctggaaatg gccagcctcg gttccaaggt gctgcagatc cgggcggtcg        60
     agttcgccgg caagtacaac gttccgctgc gcgtgctgca cagcttccag gagggtccgg       120
     gcaccctcat tactatcgat gatgaagagg aatccatgga acagccgatc atctccggca       180
     tcgccttcaa ccgcgacgaa gccaagctga ccatccgtgg cgtacccgat acccccggcg       240
     tggccttcaa gatcctcggg ccgatcagtg ccgccaatgt ggaagtcgac atgatcgtgc       300
     agaacgtggc gcacgataac accaccgact tcaccttcac ggtgcatcgc aacgattacc       360
     tgaacgccct ggaaatcctc aagcagaccg ccgccaacat cggcgcgcgc gaagccatcg       420
     gcgacaccaa catcgccaag gtttccatcg tcggcgtcgg catgcgttcg cacgccggcg       480
     tggccagccg catgttcgaa gcgctggcca aggaaagcat caacatccag atgatctcca       540
     cctcggaaat caaggtttcc gtggtgatcg aagagaagta cctggaactg gcggtacgtg       600
     ctctgcacac ggcgttcgag ctcgacgcgc cggcgcgaca gggtgagtga cgctgacagg       660
     cgaaaggcgc ggcaaccccg cgccttttgt cgtttttgac cgtttggcag gaactttcat       720
     tccggcggga ctggtcaata ctgggtgaag gatcgcgctc ttgatttctg cggatccgcc       780
     gccatttctt ttttgcagac tgttgtcctg aaatattcgc gtgaggagaa aggaatgctg       840
     attctgactc gtcgggtcgg agagaccctg atggtaggtg acgacgtcac cgtgacggta       900
     ctgggtgtca aagggaacca ggtgcgcatc ggcgtcaacg cgccgaagga agtcgccgta       960
     caccgggagg aaatttacca gcgcatccag aaagagaaag atcaagagcc aaaccattaa      1020
     tttttatcta attttccctt tgcaaacggg gtaaagatgg gtatcatgcg ccccgtgttg      1080
     cggagaggtg gccgagtggc cgaaggcgct cccctgctaa gggagtacac ctcaaaaggg      1140
     tgtcgggggt tcgaatcccc ccctctccgc cattcaagtg ttagaggttg attcaggcgg      1200
     cgaaagccat cttggtaact aagttactga tttgattgaa aaaatcgctt gacggataaa      1260
     atccacaatc tataatgcgc ccccacgacg cactcatagc tcagctggat agagtactcg      1320
     gctacgaacc gagcggtcgg aggttcgaat cctcctgagt gcgccatatt tcgaagggtt      1380
     cctctcgtca ggggctcggc gagcgaagga tcgacagttg cggtctttca cggtaaaaca      1440
     agcgttaccg gcaggtggcc ggaaaaagca ccgacacgca ctcatagctc agctggatag      1500
     agtactcggc tacgaaccga gcggtcggag gttcgaatcc tcctgagtgc gccataccga      1560
     aagggcctgc agcaatgca                                                   1579
//
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