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EBI DbfetchID AF061446; SV 1; linear; genomic DNA; STD; PRO; 2946 BP. XX AC AF061446; XX DT 02-NOV-1998 (Rel. 57, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Chromobacterium violaceum polyhydroxyalkanoate synthase (phaC) gene, DE complete cds; 3-ketothiolase (phaA) gene, partial cds; and unknown gene. XX KW . XX OS Chromobacterium violaceum OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; OC Chromobacterium. XX RN [1] RP 1-2946 RX PUBMED; 10427049. RA Kolibachuk D., Miller A., Dennis D.; RT "Cloning, molecular analysis, and expression of the polyhydroxyalkanoic RT acid synthase (phaC) gene from Chromobacterium violaceum"; RL Appl. Environ. Microbiol. 65(8):3561-3565(1999). XX RN [2] RP 1-2946 RA Kolibachuk D.J., Dennis D.E.; RT ; RL Submitted (23-APR-1998) to the EMBL/GenBank/DDBJ databases. RL Biology, Rhode Island College, 600 Mt. Pleasant Ave., Providence, RI 02908, RL USA XX FH Key Location/Qualifiers FH FT source 1..2946 FT /organism="Chromobacterium violaceum" FT /mol_type="genomic DNA" FT /db_xref="taxon:536" FT CDS complement(<1..415) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="OrfA" FT /db_xref="GOA:Q9ZHI3" FT /db_xref="HSSP:1GTT" FT /db_xref="InterPro:IPR002529" FT /db_xref="UniProtKB/TrEMBL:Q9ZHI3" FT /protein_id="AAC69614.1" FT /translation="MSSVKLGLHAIRVGNIFCIGRNYAAHAAELGNKVEDEPLVFLKPT FT SALLDESSPIRLPEYSGDVHHECELVALIGKGGDDIPPEKALDHVAGYGIGLDLTARDA FT QAEAKRKGQPWTKAKGFRGAACVSTLVPAARVED" FT CDS 741..2447 FT /codon_start=1 FT /transl_table=11 FT /gene="phaC" FT /product="polyhydroxyalkanoate synthase" FT /note="PHA synthase" FT /db_xref="GOA:Q9ZHI2" FT /db_xref="InterPro:IPR010941" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZHI2" FT /protein_id="AAC69615.1" FT /translation="MDAAVRQLAVAASSPRTAQPIPSPALAQLMNQTNQLFALQSGLPA FT AGQSVVAIGRPAAGQEAAAEAGAKPADRRFASPEWNEHPFYNFVKQSYLQTSKWMMELV FT DKTQLDEDAKDKLAFATRQFLDSMSPSNFMLTNPDVVKRAIETKGESLVEGMKNMLDDF FT QKGHISMSDESKFEIGKNLVVTPGQVVFRNELIELIQYTPTTDKVYEKPLLFVPPCINK FT YYLMDLQPDNSMVRHFVAQGYRVFLISWRSAVAEMKHFTWETYIEKGVFAAAEAVQKIT FT KQPTMNVLGFCVGGVILTTALCVAQAKGLKYFDSATFMTSLIDHAEPGEISFFIDESVV FT AGREAKMASGGIISGKEIGRTFASLRANDLVWNYVVNNYLLGKTPAPFDLLFWNNDAVD FT LPLPMHTFLLRQFYMNNALVRPGAITLCGVPIDIAKIDVPVYMFAARDDHIVLWSSAFS FT GLKYLQGAPSRRFVLGASGHIAGSINPVTKDKRNYWANDTLPLHAEEWLESAESRPGSW FT WKDWDAMLAPQSGKQVAAPKSLGNKEFPPLLAAPGSYVLAKAMPSVAASLQ" FT CDS 2518..>2946 FT /codon_start=1 FT /transl_table=11 FT /gene="phaA" FT /product="3-ketothiolase" FT /db_xref="GOA:Q9ZHI1" FT /db_xref="HSSP:1DLU" FT /db_xref="InterPro:IPR016038" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZHI1" FT /protein_id="AAC69616.1" FT /translation="MEVAIVAAHAPAIGSFGGGLAKIPAPELGATVIKALLEKTGVKPE FT DVSEVILGQVLTAGSGQNPARQALIKAGLPVTTPATTLNVVCGSGLRAVHLAAQAILAG FT DADIVIAGGQESMSLSPYILPGSRDGFRMGNAQLVDTMV" XX SQ Sequence 2946 BP; 576 A; 1002 C; 879 G; 489 T; 0 other; gatcctccac cctggccgcc ggcaccagcg tcgacacgca ggccgcgccg cggaagccct 60 tggccttggt ccacggctgg cctttgcgct tggcctccgc ctgcgcgtcg cgcgcggtca 120 gatccagccc tattccataa ccggccacat gatccagcgc cttctccggc ggaatgtcgt 180 cgccgccctt gcctatcagc gccaccagct cgcactcgtg gtgcacgtcg ccggaatatt 240 ccggaagccg tatcggcgag gactcgtcca gcaacgccga ggtgggcttc aggaatacca 300 gcggctcgtc ctccaccttg ttgcccagct cggcggcatg cgccgcgtaa ttgcggccta 360 tgcagaaaat attgccgacg cggatggcat gtaagccaag ttttacactc gacattgcaa 420 ttctccctga attccggagt cgattatccc acaagcgatg ccgaatccat accggcaagc 480 cgcgcgcgcc ctattacagt ttgtgcgttg cagcaacaaa cttcggccca tgcccgcctt 540 atggcggatt tcgccgccgg acggcgtgaa aatgtcatgc aaccctgtta cagtcgcagg 600 tacatccgct tgaccatgca gtccaggcat tcagacaggc ttcgacaacg atttgcacgt 660 ttcaggagat tcatcttgtc ccagaatagt accgccgcgc tggaaggttt cttcgccagc 720 ctctccgagg ccaaccagca atggatgcag cagttcgtca actcgctgtc gcagcctcca 780 gcccccgaac ggcgcagccc atcccttcgc cggcgctggc gcagctgatg aaccagacca 840 accagctgtt cgctctccag tctggtttac cagcagcagg tcaatctgtg gtcgcaattg 900 gtcggccagc ggccggccag gaagccgccg ccgaggcggg cgccaagccg gccgaccgcc 960 gcttcgcgtc gccggaatgg aacgagcacc cgttctacaa cttcgtcaag cagagctatc 1020 tgcagacctc caagtggatg atggagctgg tggacaagac ccagctcgac gaggacgcca 1080 aggacaagct ggctttcgcc acccgccagt tcctggactc gatgtccccc agcaacttca 1140 tgctgaccaa ccccgacgtg gtcaagcgcg cgatcgagac caagggcgaa agcctggtcg 1200 agggcatgaa gaacatgctg gacgacttcc agaagggcca catctcgatg tcggacgaga 1260 gcaagttcga gatcggcaag aacctggtgg tcaccccggg ccaggtggtg ttccgcaacg 1320 aactgatcga gctgatccag tacacgccga ccaccgacaa ggtctacgag aagccgctgc 1380 tgttcgtgcc gccctgcatc aacaagtact acctgatgga cctgcagccg gacaactcca 1440 tggtgcgcca cttcgtcgcc cagggttacc gcgtgttcct gatcagctgg cgctccgcgg 1500 tcgccgagat gaagcacttc acctgggaaa cctatatcga gaaaggcgtg ttcgccgcgg 1560 cggaagcggt gcagaaaatc accaagcagc cgacgatgaa cgtgctgggc ttctgcgtcg 1620 gcggcgtcat cctcaccacc gcgctgtgcg tggctcaggc caaggggctg aaatacttcg 1680 actccgccac cttcatgacc tcgctgatcg accacgccga accgggcgag atctccttct 1740 tcatcgacga gagcgtggtg gccggccgcg aagccaagat ggccagcggc ggcatcatca 1800 gcggcaagga aatcggccgc accttcgcca gcctgcgcgc caacgacctg gtgtggaact 1860 acgtggtcaa caactacctg ctgggcaaga ccccggcgcc gttcgacctg ctgttctgga 1920 acaacgacgc ggtggatctg ccgctgccga tgcacacctt cctgctgcgc cagttctaca 1980 tgaacaacgc gctggtgcgt ccgggcgcga tcacgctgtg cggcgtgccg atcgacatcg 2040 ccaagatcga cgtgccggtc tacatgttcg ccgcgcgcga cgaccacatc gtgctgtgga 2100 gctccgcctt ctccggcctg aaatacctgc agggcgcgcc cagccgccgc ttcgtgctgg 2160 gcgcgtccgg ccacatcgcc ggctcgatca acccggtcac caaggacaag cgcaactact 2220 gggccaacga cacgctgccg ctgcacgccg aggaatggct ggaaagcgcg gaaagccgcc 2280 ccggcagctg gtggaaggac tgggacgcca tgctggcgcc gcagtccggc aagcaagtgg 2340 ccgcgcccaa aagcctgggc aacaaggaat tcccgccgct gctggcggcg ccgggcagtt 2400 atgtgctggc caaggccatg ccgtccgtcg ccgccagcct gcaatgacaa ccctattcga 2460 acgccccgga gcggcatgat ccgctcccga cgagggccgc aacaaaagga gaaagacatg 2520 gaagtagcaa tcgtagccgc gcacgcaccc gccatcggca gcttcggcgg cggcttggcc 2580 aagattccgg cgccggagct gggcgccact gtgatcaagg cgttgctgga gaagaccggc 2640 gtcaaaccgg aagacgtcag cgaagtgatc ctgggccagg tgctgaccgc cggcagcggc 2700 cagaacccgg cccgccaggc gctgatcaag gccggcctgc cggtcaccac tccggccacc 2760 acgctgaacg tggtgtgcgg ctccggcctg cgcgccgtgc atctggcggc ccaggccatc 2820 ctggccggcg acgccgacat cgtcatcgcc ggcggccagg aaagcatgtc gctgtccccg 2880 tacatcctgc cgggttcgcg cgacggtttc cgcatgggca acgcccaact ggtggacacc 2940 atggtc 2946 // |
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