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EBI DbfetchID AF059505; SV 1; linear; genomic DNA; STD; PRO; 3017 BP. XX AC AF059505; XX DT 28-APR-1998 (Rel. 55, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Yersinia enterocolitica exopolygalacturonase gene, complete cds. XX KW . XX OS Yersinia enterocolitica OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. XX RN [1] RP 1-3017 RX DOI; 10.1139/cjm-45-5-396 RX PUBMED; 10446714. RA Liao C.-H., Revear L., Hotchkiss A., Savary B.; RT "Genetic and biochemical characterization of an exopolygalacturonase and a RT pectate lyase from Yersinia enterocolitica"; RL Can. J. Microbiol. 45(5):396-403(1999). XX RN [2] RP 1-3017 RA Liao C.-H.; RT ; RL Submitted (15-APR-1998) to the EMBL/GenBank/DDBJ databases. RL USDA, ARS, Eastern Regional Research Center, 600 E. Mermaid Lane, Wyndmoor, RL PA 19038, USA XX FH Key Location/Qualifiers FH FT source 1..3017 FT /organism="Yersinia enterocolitica" FT /mol_type="genomic DNA" FT /db_xref="taxon:630" FT CDS 799..2604 FT /codon_start=1 FT /transl_table=11 FT /product="exopolygalacturonase" FT /db_xref="GOA:O68975" FT /db_xref="InterPro:IPR000743" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR008957" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="PDB:2UVF" FT /db_xref="UniProtKB/TrEMBL:O68975" FT /protein_id="AAC15064.1" FT /translation="MQAQLQRPRTTGMLVIMASLMVGTPMAMAAKSSSLDAPQQLQVPT FT LAYDESSIVLVWKAPEDTRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYANDKD FT NFQHKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKPQIVNVRDFG FT AIDDGKTLNTKAIQQAIDSCKPGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSEN FT PDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAE FT ITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVE FT NVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFD FT TGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVM FT YLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPA FT QFYDFTLKNVTVDNSTGKNPSIEIKGDTANKAWHRLVHVNNVQLNNVTPTAIMDLRDSE FT FNKVTFTELRGDTPWHFSEVKKCQG" XX SQ Sequence 3017 BP; 837 A; 705 C; 690 G; 785 T; 0 other; gaattcaatg ataaaagctg ccgtgcgcag cttttttatt gagatgtcat gtgtatacaa 60 tcaatttgac aaaatgtcat aaagtgacaa tacttcaatt atgaaactaa cagaagatct 120 tcccggtttt acccccgctc aaaagctctt acttgcagct ttattgcaaa atcagagtga 180 tactctcgat ctctcgctgt tgaatcaaca gaatgcattg ccagtagata tggctcagca 240 cctatgccgt ttattgcgtc tggccattat attctccagc cgtcgccgcg atgacactct 300 gccagccgtc cgtctacggg ccaatggtga aacactttat gtgctattgc ctcatggctg 360 gttgcagcaa catccttacc gcgcagaggc attagagcaa gaaagtcatt ggcagagtta 420 tgttcagtgg ccactactat tagaagaatt taactaaatt cttgaggtta atgacaaagt 480 gcctgtagtg gtgaaaacag gcagatcgta aagacgccgt aaacccctcc ctgggggctc 540 gagccgcgcc gtccgtggcg cggacgcttt actcttctac ctgtcttcac cttgcaagat 600 tgagtcgtcg aggtttgtca gcagtctgaa gaatttgact aaattctttg ttgttggcgg 660 cctcggtcgc cttcccctcg cttatattct tgctgtaaat ccccataaaa ctatcagatt 720 gtgatcaccc tcagtttaaa aaagaaacat tgtatgtatt tttataaaac actgtttctt 780 tattggaaag ggataacaat gcaagcacag cttcaacgcc cacgaactac aggcatgctg 840 gtgatcatgg ccagtctgat ggtgggtact ccgatggcaa tggcagcaaa atcaagtagt 900 ctcgatgctc ctcagcagct acaagttccc actctcgcct atgatgagag cagtattgtt 960 ctggtatgga aagcgccgga agatacccgc aaaatagttg attatcagat tttctcagcg 1020 gggaaattgt taggtaaggc cagcgataat aatgataact tctcaccggc caagccttat 1080 atcgatcatt tctatgccaa tgataaagat aatttccaac ataaaattgt gatgcaaaac 1140 tttacggtga taggcctaaa acccgaaacc agctatcaat ttacggtgaa agcacaatac 1200 gccgatggtt ctttatctgt agccagcaag cccattacag ccaaaaccag cgccaagccg 1260 cagattgtga atgtgcgtga ctttggtgcc atcgatgacg gaaaaacatt gaataccaaa 1320 gccatacagc aagcaattga tagctgtaag cccggctgcc gtgtcgaaat ccctgcgggc 1380 acttacaaaa gcggtgcgct ttggctgaaa agtgacatga cccttaacct acaggccggt 1440 gccatattat tgggttcaga aaatccagat gattaccctg cgggctaccg tttgtatcct 1500 tattccacca ttgagcgccc agcatcgctg atcaatgcca tcgatcctaa taacagcaag 1560 ccgggcacat tccgcaatat tcgtattacc ggctctggag taattgatgg caatggttgg 1620 ctgcgcgcaa aaactgctga aattactgat gaattaggcc gatcactgcc gcaatatgtt 1680 gcgagtaaga atagcaaagt gcatgaagac ggcattctgg ctaaaaatca ggttgaaaag 1740 gctgtttccg atggtatgga tttgaaaaat gcctatggcc agcgccgctc cagccttatg 1800 acattacgcg gggtagaaaa tgtgtatctg gcaggcttta cggtacgtaa ccctgccttc 1860 cacggcatta tgaatctgga aaaccacaat gtggttgcca acggattgat tcaccaaaca 1920 tatgatgcga ataacggcga tggtatcgag ttcggtaaca gccagaatgt catggtgttt 1980 aataacttct ttgataccgg cgatgactgc atcaactttg cggcaggtac aggagaaaag 2040 gcccaggaac aagaacccat gaaaggtgca tggttattta ataactattt ccgaatgggg 2100 catggcgcga tagtcactgg tagccacaca ggggcgtgga ttgaagatat cctggccgaa 2160 aataatgtga tgtacctgac tgatatcggt ctgcgagcta agagcaccag caccatcggt 2220 ggtggcgcgc gtaatgtcac tttccgcaat aatgcaatgc gtgatctggc gaagcaagtg 2280 atggtgatga cattggatta tgctgatagc aatgccaaca ttgattaccc tccagccaag 2340 atccctgccc aattctatga tttcacatta aaaaatgtga cggtagataa ttccactggc 2400 aaaaatccgt ctattgaaat caaaggggat acagcgaaca aggcctggca ccgtctggtt 2460 cacgtgaaca atgtgcaact taataatgtc acgccgacag caatcatgga cctacgtgac 2520 agtgaattta ataaagtcac tttcactgaa ttgcggggcg atacgccatg gcacttcagc 2580 gaggtgaaaa aatgtcaagg ttgatggtaa acctgtcgcg ccttaatcaa taacagatgg 2640 gcaggttctg ttatcacctg cccactatta gttttgagta ttcactgcgg ctttttagca 2700 ttcgctaatt gcgctcgaat attggcgaga tgactctggc ctttttgcat ccgctcttcc 2760 gggctaacgg ctttgcgctc attttcccat ttcaaatcat cctgcgggag ttccatcagg 2820 aaacggctgg gttctggccg aatcagctca ccatactgcc gccgctcttt gcataaggtg 2880 aaaaacagtt cgcgttgagc gcgggtgatg cccacatagg ccagtcgccg ctcttcatct 2940 acattgtctt catcaatact gctttggtgt ggcaacaaac cttcttccat accaaccaaa 3000 aacacatacg ggaattc 3017 // |
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