 |
|
EBI DbfetchID AF052582; SV 1; linear; genomic DNA; STD; FUN; 2154 BP. XX AC AF052582; XX DT 23-MAR-1998 (Rel. 55, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Fusarium oxysporum f. sp. lycopersici 42-87 family F xylanase (XYL3) gene, DE complete cds. XX KW . XX OS Fusarium oxysporum f. sp. lycopersici OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; OC Hypocreomycetidae; Hypocreales; mitosporic Hypocreales; Fusarium; OC Fusarium oxysporum species complex. XX RN [1] RP 1-2154 RX DOI; 10.1007/s004380050997 RX PUBMED; 10323234. RA Ruiz-Roldan M.C., Di Pietro A., Huertas-Gonzalez M.D., Roncero M.I.; RT "Two xylanase genes of the vascular wilt pathogen Fusarium oxysporum are RT differentially expressed during infection of tomato plants"; RL Mol. Gen. Genet. 261(3):530-536(1999). XX RN [2] RP 1-2154 RA Ruiz-Roldan M.C., Huertas-Gonzalez M.D., DiPietro A., Roncero M.I.G.; RT ; RL Submitted (08-MAR-1998) to the EMBL/GenBank/DDBJ databases. RL Dept. Genetica, Facultad de Ciencias, Universidad de Cordoba, Avda San RL Alberto Magno, Cordoba 14071, Spain XX FH Key Location/Qualifiers FH FT source 1..2154 FT /organism="Fusarium oxysporum f. sp. lycopersici" FT /strain="42-87" FT /mol_type="genomic DNA" FT /db_xref="taxon:59765" FT CDS join(409..481,537..863,916..1670) FT /codon_start=1 FT /gene="XYL3" FT /product="family F xylanase" FT /db_xref="GOA:O59937" FT /db_xref="HSSP:1BG4" FT /db_xref="InterPro:IPR000254" FT /db_xref="InterPro:IPR001000" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:O59937" FT /protein_id="AAC06239.1" FT /translation="MHTFSVLLALAPVSALAQAPIWGQCGGNGWTGATTCASGLKCEKI FT NDWYYQCVPGSGGSEPQPSSTQGGGTPQPTGGNSGGTGLDAKFKAKGKQYFGTEIDHYH FT LNNNPLINIVKAQFGQVTCENSMKWDAIEPSRNSFTFSNADKVVDFATQNGKLIRGHTL FT LWHSQLPQWVQNINDRSTLTAVIENHVKTMVTRYKGKILQWDVVNEIFAEDGNLRDSVF FT SRVLGEDFVGIAFRAARAADPAAKLYINDYNLDKSDYAKLTRGMVAHVNKWIAAGIPID FT GIGSQGHLAAPSGWNPASGVPAALRALAASDAKEIAITELDISGASANDYLTVMNACLA FT VPKCVGITVWGVSDKDSWRPGENPLLYDSNYQPKAAFNALVNAL" XX SQ Sequence 2154 BP; 509 A; 597 C; 502 G; 546 T; 0 other; aaacctcccc aaactggtag taggtctcga tctcaaaaat catattatcc cgctgcacaa 60 ttaaataaac gacccatatt tgcggggggc accatggcag ctttctgttt agggtgttga 120 cgacaaactt ggcgatgctc cgacatttcc tcaatgggcc tcattcggag cttggttctc 180 cgcacataag gctctataac cccagatatg ccaatttccc ggcaaaacac gatggaatag 240 gtcggattgg tcagaatttg cgattctgta gagccggggg cgaatatgcc atgtaggatg 300 ctatatcaaa gctatatata aggacgggag taaccccttg acgttgcgtt caatatcttc 360 agatagtatc ttctgcttcg aagcatcaac tcactgagat cagtcaaaat gcatactttt 420 tcggttctcc tcgctctcgc tcccgtgtcc gcccttgccc aggctcccat ctggggacag 480 tgtacgttgc agcggccccg atgaactcga tactcgatag ctaaaacttc ttacaggcgg 540 tggcaatggc tggaccggtg ctacaacttg cgctagtggt ctgaagtgtg agaagatcaa 600 cgactggtac tatcagtgtg ttcccggatc tggaggatct gagccccagc cttcgtcaac 660 tcagggtggt ggaactcctc agcctactgg cggaaacagc ggcggcactg gtctcgacgc 720 caagttcaag gccaagggca agcagtactt tggtaccgag atcgaccact accaccttaa 780 caacaaccct ctgatcaaca ttgtcaaggc ccagtttggt caagtgacat gcgagaacag 840 catgaagtgg gatgccattg agcgtaaggt tccctatttc gaagacaatt tgaatcgcca 900 tctgacatgg aacagcttcg cgcaactcct tcaccttcag caacgctgac aaggtcgtcg 960 acttcgccac tcagaacggc aagcttatcc gtggccacac tcttctctgg cactctcaac 1020 tgcctcagtg ggttcagaac atcaacgatc gctctaccct caccgcggtc atcgagaacc 1080 acgtcaagac catggtcacc cgctacaagg gcaagatcct tcagtgggat gtcgtcaacg 1140 agatcttcgc tgaggacggt aacctccgcg acagtgtctt cagccgagtt ctcggtgagg 1200 actttgtcgg tattgctttc cgcgctgccc gcgccgctga tcccgctgcc aagctctaca 1260 tcaatgatta caatctcgac aagtctgact atgctaagct cacccgcgga atggtcgctc 1320 acgttaacaa gtggattgct gccggtattc ccatcgacgg tattggatct cagggccatc 1380 ttgctgctcc tagtggctgg aatcctgcct ctggtgttcc tgctgctctc cgagctcttg 1440 ctgcctcaga cgccaaggag attgccatca ctgagcttga tatctctggc gccagtgcta 1500 acgattacct tactgtcatg aacgcttgcc ttgccgttcc taagtgtgtc ggcatcactg 1560 tctggggtgt ctctgacaag gactcgtggc gacctggtga gaaccccctc ctctacgaca 1620 gcaactacca gcccaaggct gctttcaatg ccttggtcaa cgctctgtaa gctgttgttg 1680 atgtatgtcg ctggatcata caacgaaatg tcctagttgg ataaagcgtt ggtggtagaa 1740 tgatgcctaa tgaaatggtt caattgtata tatctatttc tcacgtacat atttagcaga 1800 atggaagtca ctggctacgt cctcactatc tgagtactcc atccaaattc ctaacccatc 1860 gatacttcta cttcttcctt tgatatcatg atcaattaac accaagatct cacctcaact 1920 tcgggctgct gcgttgcaga atccagctac gttaaagccc caggcctcct ctctcgagat 1980 attggtacca agagctggcg gaggtgagat atggttgtgg ccctccataa cctgaacttc 2040 gagctctact cccgtgcttc ccttacccga tcgccaaagc tcaataaact ccttgttgca 2100 ggccaaaatc tcatcttcgg ggtcaagaga tccatacagc agaaggaact ggac 2154 // |
|