EBI Dbfetch

ID   AF049493; SV 3; linear; genomic DNA; STD; PRO; 1430 BP.
XX
AC   AF049493;
XX
DT   13-MAR-1998 (Rel. 55, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Cellvibrio mixtus endoxylanase (xynC) gene, complete cds.
XX
KW   .
XX
OS   Cellvibrio mixtus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [1]
RP   1-1430
RA   Fontes C.M.G.A., Clarke J.H., Hazlewood G.P., Gilbert H.J., Fernandes T.H.,
RA   Ferreira L.M.A.;
RT   ;
RL   Submitted (20-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Producao Animal, Faculdade de Medicina Veterinaria,
RL   Universidade Tecnica de Lisboa, Rua Gomes Freire, Lisboa 1199 Lisboa Codex,
RL   Portugal
XX
RN   [2]
RC   Sequence update by submitter
RP   1-1430
RA   Fontes C.M.G.A., Clarke J.H., Hazlewood G.P., Gilbert H.J., Fernandes T.H.,
RA   Ferreira L.M.A.;
RT   ;
RL   Submitted (26-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Producao Animal, Faculdade de Medicina Veterinaria,
RL   Universidade Tecnica de Lisboa, Rua Gomes Freire, Lisboa 1199 Lisboa Codex,
RL   Portugal
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1430
RA   Fontes C.M.G.A., Clarke J.H., Hazlewood G.P., Gilbert H.J., Fernandes T.H.,
RA   Ferreira L.M.A.;
RT   ;
RL   Submitted (15-JUN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Producao Animal, Faculdade de Medicina Veterinaria,
RL   Universidade Tecnica de Lisboa, Rua Gomes Freire, Lisboa 1199 Lisboa Codex,
RL   Portugal
XX
RN   [4]
RC   Sequence update by submitter
RP   1-1430
RA   Gilbert H.J.;
RT   ;
RL   Submitted (24-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   School of Cell and Molecular Biosciences, University of Newcastle upon
RL   Tyne, The Agriculture Building, Newcastle upon Tyne NE1 7RU, United Kingdom
XX
CC   On Oct 24, 2003 this sequence version replaced gi:5069447.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1430
FT                   /organism="Cellvibrio mixtus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:39650"
FT   gene            1..1430
FT                   /gene="xynC"
FT   CDS             141..1280
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynC"
FT                   /product="endoxylanase"
FT                   /note="XYLC"
FT                   /db_xref="GOA:O68541"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR006311"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR017909"
FT                   /db_xref="PDB:1UQY"
FT                   /db_xref="PDB:1UQZ"
FT                   /db_xref="PDB:1UR1"
FT                   /db_xref="PDB:1UR2"
FT                   /db_xref="PDB:2CNC"
FT                   /db_xref="UniProtKB/TrEMBL:O68541"
FT                   /protein_id="AAD09439.3"
FT                   /translation="MNLSRRQLLALTSAGIAMGQASKLAAATKAAEQTGLKSAYKDNFL
FT                   IGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGT
FT                   KHNLHMVGHTLVWHSQIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDV
FT                   VNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDYNIERTGKREATVE
FT                   MIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRVHFTELDVDVLPSVW
FT                   ELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVS
FT                   DDASWLNGFPIPGRTNYPLLFDRKLQPKDAYFRLLDLKR"
XX
SQ   Sequence 1430 BP; 422 A; 350 C; 324 G; 334 T; 0 other;
     ctcagcattt gctgcgatac ttatagtcat ctaaaatata acactggtat acaagaacac        60
     caaacagctt tttacccatg aaaatgtaaa gttttatcca caacaggcta tcaacaacaa       120
     taagcacaga ggatcaacct atgaatcttt cacgtcggca acttctcgca ctaaccagtg       180
     cgggcatcgc gatgggccaa gccagcaagc ttgcggcagc aaccaaagcg gcggagcaaa       240
     ccgggcttaa aagtgcctac aaggataact ttttaatcgg cgccgcactc aatgcgacta       300
     ttgcgagcgg tgcggatgaa cgccttaata ccttgattgc caaagagttt aattcaatta       360
     cgccagaaaa ctgcatgaaa tggggtgtat tgcgcgatgc ccaaggccag tggaattgga       420
     aagacgccga tgcatttgtt gcatttggca ccaaacacaa tctgcacatg gtcggccaca       480
     ccttggtatg gcacagccag atccacgatg aagtatttaa aaacgccgat ggtagttaca       540
     tcagcaaagc tgcgttgcag aaaaaaatgg aagagcacat caccaccctc gcgggccgct       600
     ataaaggcaa acttgccgcc tgggatgtag tgaatgaagc ggtgggcgat gatttgaaaa       660
     tgcgtgacag ccattggtac aagattatgg gcgatgattt tatctacaac gcctttaccc       720
     ttgccaatga agtcgacccc aaagcgcact tgatgtacaa cgattacaac attgaacgca       780
     ccggcaaacg cgaagcaaca gtggaaatga tcgagcgctt gcaaaaacgc ggcatgccga       840
     ttcacggttt aggaattcaa ggacatttgg gaatagatac tccgcctatt gccgagatcg       900
     aaaagagtat tatcgccttc gccaaattgg gcctgcgcgt gcacttcacc gagctggatg       960
     tagacgtact gccttcggta tgggaactgc cggtagctga agtttctacc cgctttgaat      1020
     acaaacccga gcgcgacccc tataccaaag gtttgccgca ggaaatgcaa gacaaattgg      1080
     caaaacgcta cgaagattta ttcaaattat ttatcaaaca cagcgataaa atcgaccgcg      1140
     ccaccttctg gggtgtaagc gatgacgcaa gctggctcaa cggcttcccg attcccggtc      1200
     gcaccaacta cccactgttg tttgatcgca aactacaacc gaaagacgct tacttccgtt      1260
     tactggattt aaaacgttaa gctcaaaata aaaatcccgc atcactgggt gatgcgggga      1320
     ttttttttac aacacagatt gttttcccac ttcattttct tttcgataaa cgctgttaat      1380
     aactctgcat tcgccttgtg ttgtgcgata cgtggatgct gaccgtaacc                 1430
//