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EBI Dbfetch

ID   AF047839; SV 1; linear; genomic DNA; STD; PRO; 3707 BP.
XX
AC   AF047839;
XX
DT   13-MAR-1998 (Rel. 55, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Pseudoalteromonas sp. S9 putative glucosyl hydrolase precursor and adaptive
DE   response regulatory protein (ada) genes, complete cds.
XX
KW   .
XX
OS   Pseudoalteromonas sp. S9
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
XX
RN   [1]
RP   1-3707
RA   Stretton S., Goodman A.E.;
RT   "The Pseudoalteromonas sp. S9 ORF 3 can encode a hypothetical glucosyl
RT   hydrolase";
RL   Unpublished.
XX
RN   [2]
RP   1-3707
RA   Stretton S., Goodman A.E.;
RT   "The adaptive respone to DNA alkylation in a marine bacterium
RT   Pseudoalteromonas sp. S9";
RL   Unpublished.
XX
RN   [3]
RP   1-3707
RA   Stretton S., Goodman A.E.;
RT   ;
RL   Submitted (12-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Flinders University of South Australia, GPO Box 2100,
RL   Adelaide, South Australia 5001, Australia
XX
RN   [4]
RC   Sequence update by submitter
RP   1-3707
RA   Stretton S., Goodman A.E.;
RT   ;
RL   Submitted (10-JUL-1998) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Flinders University of South Australia, GPO Box 2100,
RL   Adelaide, South Australia 5001, Australia
XX
CC   On Jul 11, 1998 this sequence version replaced gi:2935420.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3707
FT                   /organism="Pseudoalteromonas sp. S9"
FT                   /strain="S9"
FT                   /mol_type="genomic DNA"
FT                   /clone="pS91ZAP31"
FT                   /db_xref="taxon:55516"
FT   sig_peptide     106..192
FT   CDS             106..2535
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="putative glucosyl hydrolase precursor"
FT                   /note="S9 ORF 3"
FT                   /db_xref="GOA:O85169"
FT                   /db_xref="InterPro:IPR001661"
FT                   /db_xref="InterPro:IPR008902"
FT                   /db_xref="InterPro:IPR008928"
FT                   /db_xref="UniProtKB/TrEMBL:O85169"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /protein_id="AAC25988.1"
FT                   /translation="MDNVYKNKILFRMKTLLAAFLVVCCSLQASPLSQLSREDAPQSAK
FT                   YYDSYGNQQANPLFDLGSWHGFLQPKHENAGSFAGPAIVFEEYTLYFAEYIEMLSIAVD
FT                   GGEYQRLSELPSSISSELGYYKQTFTTNSFNIDVYLSFVSTRSSVIDTRISNLTEKPLN
FT                   LSLKWQGQLTKHWKSDDDDYIWQVTPQISSQAIAWQFGQTRDTWHKLNDSTARFKIARS
FT                   IAFKSVFNPVEPSYRSTSALTVSPANSKLLTTVISYTHNQHESDSEDVKINAWLNSEKP
FT                   AYLNAKTRWQSLVNKLSNQHSEQAKRLAIKSLETLVGNWRSPAGAIKHNGITPSVTARW
FT                   FNGVWAWDSWKHAYALAEVMPELAKDNVRAMFDYQITHKDTLRAQDSGMVIDAVFYNYS
FT                   KARGGDGGNWNERNTKPPLASWVVWQIVSKSNDEAFLAEMYPKLKAYHEWWYLNRDHNG
FT                   NGLIEYGGTVDDTHTTKEGEMRFSVQANTQLAVLASCKKGKDNWYLCSGNQLYLSLLDN
FT                   SQIDAFDIPVQHAAGWESGMDNAARFGFISNEQFKEYANQTYQGDMAKAKADWQVKIFE
FT                   NVRDGQLVGYSINQESVELNSYLAMEKRQLAQMAKRLGNNQDAQKYQAEYQTLKARIDA
FT                   CFYDSKTGFYYDLAIDNAPQSPSECKGKLLVHRGKGPEGWAPLFSQVASTENAKSVINT
FT                   MLSEHEFNTHVPFPTAAITNPAFGADVYWRGRVWLDQVYFALSALSHYGYKKDAQQLLQ
FT                   KLISNSKGLSQKDSIRENYHPFTGEQQGATNFSWSAAHLMMMLDEIGLPESSLGQH"
FT   misc_feature    142
FT                   /note="alternate position for initiation methionine"
FT   mat_peptide     193..2532
FT                   /product="glucosyl hydrolase"
FT                   /note="putative"
FT   CDS             2616..3674
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ada"
FT                   /product="adaptive response regulatory protein"
FT                   /function="0-6-methylguanine-DNA methyltransferase"
FT                   /db_xref="GOA:O68498"
FT                   /db_xref="HSSP:1SFE"
FT                   /db_xref="InterPro:IPR001497"
FT                   /db_xref="InterPro:IPR004026"
FT                   /db_xref="InterPro:IPR008332"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR014048"
FT                   /db_xref="InterPro:IPR016221"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="UniProtKB/TrEMBL:O68498"
FT                   /protein_id="AAC25987.1"
FT                   /translation="MKITQPEKINEYYQALVDKNSQYLGCFYACVTSTQIFCIATCSAR
FT                   KPKKENVEFCSEVKDALDAGFRPCKVCKPTQNAHSMPEPVATALKLLALKGQEKLSDYH
FT                   LKEAGIQPELVRRWFKKHYGMTFQAYQRMVRINTAYQEIQNGKQLIDSALDSGFNSLSG
FT                   FAYTFKKATGLNPSKSKEKQVILIARHTTPIGPMFICATNSGVCLVEFVDRRMLETEFN
FT                   DLQKRLNAVILQGENDHIKQCKSELNEYFAGKRKEFSIPLDLPGTEFQQGVWQGLQTIP
FT                   FGETRSYSEQATALNNAKAVRAVATANGMNRVAIIVPCHRVIGKDGSLTGYGGGLERKA
FT                   WLLRHEGADFKE"
XX
SQ   Sequence 3707 BP; 1165 A; 712 C; 822 G; 1008 T; 0 other;
     aataaacttg gctttagccg ttattttaga aactagttta attcaattca aatctttgtg        60
     atgtgcttag tgctatcgca atctgattgt tttttgcatt actttatgga taatgtatac       120
     aaaaataaaa tactgtttag aatgaaaact ttactcgctg cttttcttgt tgtttgttgc       180
     agtttacaag catcaccact ttcacaatta agtcgtgaag atgcaccaca aagcgctaaa       240
     tattacgata gctatggtaa tcagcaagca aacccattat ttgatcttgg tagctggcat       300
     ggatttttac aaccaaaaca tgaaaatgct ggcagctttg cggggcctgc cattgtattt       360
     gaagaataca ccctttattt tgctgaatat attgagatgc tatcgattgc tgttgatggt       420
     ggtgaatatc aacgtctttc agaattacct agtagcattt caagtgagct tggatattac       480
     aaacaaacct ttaccacaaa ctcatttaac atagatgttt acttaagttt tgtatcaacg       540
     cgtagcagtg tgattgatac acgcatttct aatttaaccg aaaagccact caacctttca       600
     ctaaagtggc aagggcaact tacaaagcat tggaaaagcg acgatgatga ttacatttgg       660
     caagtaacac cgcaaatttc tagccaagca attgcatggc aatttggcca aacacgtgat       720
     acgtggcaca aacttaatga cagcaccgcg cgatttaaaa tagcccggtc tattgctttt       780
     aaatctgttt ttaaccctgt tgaaccaagc tacagaagta caagtgcatt aacggtttcg       840
     cctgcaaact caaagttact gactacagta atcagttata ctcataatca gcacgaaagc       900
     gatagcgaag atgtaaaaat aaacgcttgg ttaaacagtg aaaagcctgc ctatttgaat       960
     gcgaaaacca gatggcagtc attggtaaat aaactatcaa atcagcacag tgaacaagca      1020
     aaaaggttag caataaagtc gctagaaacc ttagttggca actggcgtag ccctgcaggg      1080
     gcaattaaac ataatggcat aaccccatcg gtgacggccc gttggtttaa tggcgtttgg      1140
     gcgtgggaca gttggaagca tgcctatgca cttgcagagg tgatgcccga acttgctaaa      1200
     gacaatgtac gcgccatgtt tgattatcag ataacgcaca aagatacact tcgtgcgcaa      1260
     gattcgggca tggtgattga tgcggtgttt tacaactact caaaagcgcg cggtggcgat      1320
     ggaggtaatt ggaatgagcg taatactaag ccgcctctgg catcttgggt agtttggcaa      1380
     attgtgtcaa aaagcaatga tgaagcgttt ttggccgaaa tgtatcccaa attaaaagca      1440
     taccatgaat ggtggtattt aaaccgcgat cataatggta atggtttaat tgaatatggc      1500
     ggtacggttg acgatacaca taccacaaaa gagggggaga tgcgtttctc agtgcaagca      1560
     aacacgcaac tggctgtttt agcatcgtgc aaaaaaggga aagataattg gtatttatgc      1620
     agcggcaatc agttgtattt aagtttactt gataacagcc aaattgatgc gtttgatatc      1680
     cctgtgcaac atgctgcagg ttgggagtca ggtatggaca atgcggcgcg ctttggtttt      1740
     atttcaaatg agcagtttaa agaatatgcc aatcaaactt atcaaggcga tatggcaaaa      1800
     gccaaggctg attggcaggt taagattttt gaaaacgtac gtgatggtca attggttggc      1860
     tactcaatta accaagaatc tgtagagctt aatagctacc tcgcgatgga aaaacgccaa      1920
     cttgcgcaaa tggcaaaacg attaggtaac aaccaagatg cacaaaaata ccaagcagaa      1980
     tatcaaacct taaaagcacg tattgatgcg tgtttttacg atagcaaaac tggtttttat      2040
     tatgacttag ccattgataa tgccccacag tcaccgagtg aatgcaaagg taagttattg      2100
     gtgcatcgtg gcaaaggccc tgaaggttgg gcgccgttat ttagccaagt tgctagtaca      2160
     gaaaatgcta aaagcgttat taataccatg cttagtgagc acgaatttaa tacccatgtg      2220
     ccatttccta ccgctgctat cacgaacccc gcatttggcg cagatgttta ttggcgcggc      2280
     agggtgtggc ttgatcaagt gtatttcgcg ctaagtgcac taagtcatta tggctataaa      2340
     aaggacgcgc agcagctttt acaaaagctg attagcaata gtaaaggcct tagccaaaaa      2400
     gacagtattc gtgaaaacta tcatcctttt actggtgagc aacaaggcgc aactaacttt      2460
     agttggagcg ccgcacattt aatgatgatg ttggatgaaa ttggtttgcc tgaaagttcg      2520
     ttaggtcaac actaaaaata tacttgttca gttttcggtt gagtgaaatg ttagccttgg      2580
     ttacgcttgg ctaaaatcac caaatgattg gctttatgaa aatcacccaa cctgaaaaaa      2640
     ttaacgagta ttaccaagca ttggtagata aaaacagtca atatcttggc tgtttttatg      2700
     cctgtgttac cagcacgcag attttttgta tcgcgacttg cagtgcgcgc aaaccaaaaa      2760
     aagaaaatgt cgagttttgc tcagaggtaa aagacgccct tgatgcgggc tttcgcccgt      2820
     gcaaagtgtg taagccaaca caaaatgctc attcaatgcc agagccagtt gctacagcat      2880
     taaaattgct agcgctaaaa ggccaagaaa agctttcaga ctatcattta aaagaagcgg      2940
     gcattcaacc tgagctggta aggcgttggt ttaaaaaaca ctatggcatg acgtttcaag      3000
     cttatcagcg catggtgcgt ataaacaccg cttatcaaga aatccaaaat ggcaagcaac      3060
     tgattgattc ggcgcttgat tcaggtttta actcactaag cggatttgcc tacactttta      3120
     aaaaagccac aggccttaac ccaagtaaaa gtaaagagaa gcaagttatc ttaattgcgc      3180
     gccacactac acccattggc ccaatgttta tatgcgcaac caatagcggt gtatgtcttg      3240
     ttgagtttgt tgatagacgc atgttagaaa cggaatttaa cgatttacaa aaacgcttaa      3300
     atgcagtgat tctacaaggc gagaatgatc acattaagca gtgtaagtca gagctcaatg      3360
     aatactttgc gggcaagcgc aaagagttta gcattcccct agatttacca ggtactgaat      3420
     ttcagcaagg cgtatggcaa gggttacaaa ctattccatt tggcgaaaca cgcagttatt      3480
     cagagcaagc aacggcactt aataacgcta aagcggtgcg cgctgtcgcc accgcaaatg      3540
     gtatgaatcg ggttgcgatt attgtgccgt gtcatcgtgt gattggtaag gatggctcac      3600
     tgactggcta cggcggtggc ttagagcgaa aagcgtggct attacgccac gaaggggctg      3660
     attttaaaga ataaaaaagc ggtgataaca ccgctcttgt aaagtta                    3707
//


  
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