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EBI DbfetchID AF040381; SV 1; linear; genomic DNA; STD; PRO; 2587 BP. XX AC AF040381; XX DT 17-JAN-1998 (Rel. 54, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Erwinia carotovora ribosomal protein L11 methyltransferase (prmA) gene, DE partial cds; and carbonic anhydrase (cah), yhdG homolog, and small DNA DE binding protein Fis (fis) genes, complete cds. XX KW . XX OS Pectobacterium carotovorum OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pectobacterium. XX RN [1] RP 1-2587 RX PUBMED; 9811652. RA Beach M.B., Osuna R.; RT "Identification and characterization of the fis operon in enteric RT bacteria"; RL J. Bacteriol. 180(22):5932-5946(1998). XX RN [2] RP 1-2587 RA Beach M.B., Osuna R.; RT ; RL Submitted (31-DEC-1997) to the EMBL/GenBank/DDBJ databases. RL Dept. of Biological Science, SUNY Albany, 1400 Washington Ave., Albany, NY RL 12222, USA XX RN [3] RC Sequence and amino acid update by submitter RP 1-2587 RA Beach M.B., Osuna R.; RT ; RL Submitted (17-NOV-1998) to the EMBL/GenBank/DDBJ databases. RL Dept. of Biological Science, SUNY Albany, 1400 Washington Ave., Albany, NY RL 12222, USA XX CC On Nov 18, 1998 this sequence version replaced gi:2773322. XX FH Key Location/Qualifiers FH FT source 1..2587 FT /organism="Pectobacterium carotovorum" FT /mol_type="genomic DNA" FT /db_xref="taxon:554" FT CDS <1..22 FT /codon_start=2 FT /transl_table=11 FT /gene="prmA" FT /product="ribosomal protein L11 methyltransferase" FT /note="PrmA" FT /protein_id="AAC77890.1" FT /translation="GQRRAS" FT CDS 209..943 FT /codon_start=1 FT /transl_table=11 FT /gene="cah" FT /product="carbonic anhydrase" FT /db_xref="GOA:O52538" FT /db_xref="InterPro:IPR001148" FT /db_xref="InterPro:IPR018338" FT /db_xref="InterPro:IPR018340" FT /db_xref="UniProtKB/Swiss-Prot:O52538" FT /protein_id="AAC77891.1" FT /translation="MKGKLSIALMLSVCFSASATDSVHWGYEGNGDPAHWGKLSPDFSL FT CETGKNQSPINIRQALNAQHDPLQLAFQSGTQQIINNGHTIQVNVSPGNTLLLDNETFT FT LQQFHFHAPSENEIDGKQFPLEGHFVYKNADGALTVIALMFQEGAANPQLATAWQQIPA FT RVDQAEDVRTPVAIQALLPTSLNYYRFSGSLTTPPCSEGIRWLVLDHPVTASAEQISQF FT SSVMHHANNRPIQPLNGRIIIH" FT CDS 1300..2265 FT /codon_start=1 FT /transl_table=11 FT /product="yhdG homolog" FT /note="Orf1" FT /db_xref="GOA:O52539" FT /db_xref="InterPro:IPR001269" FT /db_xref="InterPro:IPR004652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/Swiss-Prot:O52539" FT /protein_id="AAC77892.1" FT /translation="MHIGQFQLTNRLIAAPMAGISDRPFRALCHAMGAGMTVSEMLSSN FT PEVWRSDKSRLRMVHSDEPGIRAVQIAGCDPDEMAAARRINADSGAQIIDINMGCPAKK FT VNRKMAGSALLQYPDLVKQILSTVVKAVDVPVTLKIRTGWAPEHRNCVEIAKLAEDCGI FT QALTIHGRTRACLFNGFAEYDSIRAVKQAVSIPIIANGDITDPHKARAVLDYTGADALM FT IGRAAQGRPWIFREIQHYLDTGELLAPLPLVEVKRLLIEHIRELHDFYGPGKGFRIARK FT HVSWYLQEHAPNDQFRRTFNAIEDASEQLEALKAYFENLA" FT CDS 2289..2585 FT /codon_start=1 FT /transl_table=11 FT /gene="fis" FT /product="small DNA binding protein Fis" FT /db_xref="GOA:O52540" FT /db_xref="InterPro:IPR002197" FT /db_xref="InterPro:IPR005412" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/Swiss-Prot:O52540" FT /protein_id="AAC77893.1" FT /translation="MFEQRVNSDVLTVSTVNSQAQVTQKPLRDSVKQALKNYFAQLNGQ FT DVSDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN" XX SQ Sequence 2587 BP; 679 A; 663 C; 629 G; 616 T; 0 other; tggccaacgc cgcgcatcgt aataacgttc tcttttaata acattccctt ttagtcccgc 60 ccaccgtctc tgcaacggtg ggcgcacttc ttcctgtcat atctcacgat tgatccccat 120 acacaggcgt atgatgcttg cgaccggacg tcacctacgt cccggcactc aacaacgtcc 180 ccgtatcatt atttttaagg gatgaaaaat gaaaggtaaa ctctctatcg cattgatgct 240 gtcggtctgc ttttccgcgt cggcaacaga ttcggttcac tggggctacg aaggcaacgg 300 cgatccggcg cactggggaa aactctcccc ggatttttcg ctgtgtgaaa cggggaaaaa 360 tcaatctccc attaatatcc gacaagcact aaacgcccag cacgatcccc tacagttggc 420 tttccagtcc ggaacacagc agattatcaa caacgggcat accattcagg tcaacgttag 480 ccctggaaat acgctgctgc tggataacga gacattcacc ttgcagcaat tccactttca 540 cgcaccgagt gaaaatgaaa ttgacggtaa acaatttccg ctggaaggcc actttgtcta 600 taaaaacgcg gatggcgcgc tcaccgttat tgcgctgatg tttcaggagg gagcagccaa 660 tccacagcta gccacggcat ggcagcagat tccggctcgt gtcgatcagg cggaggacgt 720 gcgcacgcca gttgcaattc aggccctgtt accgacgtca ttaaactact atcggttcag 780 tgggtcactc accacgccac cgtgctcaga aggcatccgc tggctggtgc tggatcatcc 840 cgtcaccgcc tctgctgaac aaataagcca gttcagctca gtcatgcatc acgccaataa 900 tcgccctata cagccgctta atggtcgaat catcatccat taagcgactc agtgaggctg 960 gtcagagcat ttgccggcca gcctcaggta aattggtgcc cttttttgcc gcattaacca 1020 acgcatttca ctgataaagc attgctagcc tgttgtatct ccagtaaaaa cgacctcgct 1080 tacagataaa attctgtaag cagatgatat tttacagagc aaaaaatcaa cacaaaaaca 1140 taacatattg ttaaatatga ataatatttt catatacctc tacgaactgc attttcattg 1200 atcgatagcc gtaaattggt caaagtttgg cctttcatct gacgtaaaaa atgcgtaata 1260 tacgcgccct tgcaggcaca gtatggtcaa tttttgtcta tgcacattgg acaatttcag 1320 cttaccaatc gtttgatagc agccccaatg gctggtatta gcgatcgccc atttagagca 1380 ctctgtcacg cgatgggcgc tggaatgacc gtgtctgaaa tgctgtcttc caatccggaa 1440 gtctggcgtt cagacaagtc gcgtttgcga atggtacata gtgatgaacc gggtatcagg 1500 gccgtgcaga ttgccggttg tgaccccgat gagatggcgg cggcacggag aatcaacgct 1560 gattccggcg cgcagatcat tgacatcaat atgggctgcc cggcgaagaa ggtgaaccgc 1620 aagatggcag gatctgcgtt gttgcagtat ccggatttgg tcaaacagat cctctctacg 1680 gtagtgaaag cggtagacgt accggtaaca ctgaagatcc gtaccggttg ggcaccagag 1740 caccgcaact gtgtagaaat tgccaaattg gctgaagact gtggcattca ggcgttaact 1800 attcacggac gcactcgtgc gtgcctgttc aatggtttcg ccgaatacga cagcattcgg 1860 gcagttaagc aggccgtttc cattcctatt attgcgaatg gcgacattac agacccgcat 1920 aaagccagag cggttcttga ctacactggc gctgacgccc tgatgatagg acgagccgct 1980 cagggaagac cctggatctt tcgggaaatc cagcattatc tggacacagg ggagttgctg 2040 gcaccactgc cgttggtaga ggtcaagcgc ttgttgatcg agcacatacg ggaattgcac 2100 gacttttatg gtccaggcaa gggatttcgt atcgctcgta agcacgtatc ctggtatctc 2160 caggagcacg ccccaaacga ccagtttagg cgcacattca acgccattga ggatgccagc 2220 gagcagctgg aggcgttgaa ggcatatttt gaaaatcttg cgtaaacaga aaaagagctg 2280 acagaactat gttcgaacaa cgcgtgaatt ctgacgtact gaccgtttcc actgtaaact 2340 ctcaggctca ggtaacccaa aaacccctgc gcgactcggt taaacaggca ctgaagaact 2400 attttgctca attgaacggt caggatgtaa gtgacctgta tgagctggta ttggctgaag 2460 ttgaacagcc tctgttggac atggtgatgc aatacacccg cggtaaccaa acccgcgctg 2520 ccctgatgat gggcatcaac cgcggtactc tgcgtaagaa attgaaaaag tacggcatga 2580 actaaga 2587 // |
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