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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF039751; SV 1; linear; mRNA; STD; VRT; 1678 BP.
XX
AC   AF039751;
XX
DT   20-JAN-1998 (Rel. 54, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Gallus gallus histone deacetylase-1 mRNA, complete cds.
XX
KW   .
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-1678
RX   DOI; 10.1074/jbc.274.34.23977
RX   PUBMED; 10446166.
RA   Takami Y., Kikuchi H., Nakayama T.;
RT   "Chicken histone deacetylase-2 controls the amount of the IgM H-chain at
RT   the steps of both transcription of its gene and alternative processing of
RT   its pre-mRNA in the DT40 cell line";
RL   J. Biol. Chem. 274(34):23977-23990(1999).
XX
RN   [2]
RP   1-1678
RA   Takami Y.;
RT   ;
RL   Submitted (23-DEC-1997) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, Miyazaki Medical Collage, Kiyotake Kihara 5200, Miyazaki
RL   889-16, Japan
XX
DR   Ensembl-Gn; ENSGALG00000008000; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000010985; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1678
FT                   /organism="Gallus gallus"
FT                   /mol_type="mRNA"
FT                   /cell_line="DT40"
FT                   /db_xref="taxon:9031"
FT   CDS             58..1500
FT                   /codon_start=1
FT                   /product="histone deacetylase-1"
FT                   /note="HD-1"
FT                   /db_xref="GOA:P56517"
FT                   /db_xref="HSSP:1C3P"
FT                   /db_xref="InterPro:IPR003084"
FT                   /db_xref="UniProtKB/Swiss-Prot:P56517"
FT                   /protein_id="AAB96923.1"
FT                   /translation="MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNY
FT                   GLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFD
FT                   GLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILEL
FT                   LKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYY
FT                   AVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGH
FT                   AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPD
FT                   FKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEE
FT                   DPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEKEEEEKKDEK
FT                   EEEKAKEEKAEPKGVKEETKST"
XX
SQ   Sequence 1678 BP; 462 A; 357 C; 466 G; 393 T; 0 other;
     ggcgggttgc gttgcgctgc gcggcggtag ggtctgcggc cgtggggagg caggaaaatg        60
     gcgctgacgc aggggaccaa gcggaaagtc tgctactact acgacggtga tgttggaaac       120
     tattactatg gccaggggca ccccatgaag ccccacagga tccggatgac ccacaaccta       180
     ctgctgaact acggccttta caggaagatg gagatatatc gccctcacaa ggcgaacgcg       240
     gaggagatga ccaagtacca cagtgatgac tacatcaaat tcctgagatc catccgccca       300
     gacaacatgt ctgagtacag caagcagatg caaagattta acgtcgggga ggactgccct       360
     gtgttcgatg ggctgtttga gttctgtcag ctctctgctg gaggctccgt tgccagcgct       420
     gtgaagctga acaagcaaca gacagatatt gctgtgaatt gggcaggagg ccttcaccac       480
     gctaagaagt cggaggcttc tggcttctgt tatgtcaacg atattgtcct ggctatcttg       540
     gagctcttaa agtatcacca gagggtcctg tatattgaca ttgatattca ccatggagat       600
     ggtgtggagg aagccttcta taccacagac cgtgtgatga ccgtgtcctt tcataagtat       660
     ggagagtact tcccaggaac aggggacctg cgggacattg gtgcaggcaa aggcaaatac       720
     tatgctgtca actatcccct ccgggatggg attgatgatg agtcctacga ggcaatattc       780
     aagccggtga tatctaaagt gatggagaca ttccagccta gtgcagttgt cctgcagtgc       840
     gggtcggatt ctctgtccgg ggacaggctg ggttgtttta atctgaccat caaaggtcat       900
     gccaagtgtg tggagtttgt caaaagtttt aatttgccta tgctgatgct gggaggaggt       960
     ggctatacga tccgcaacgt ggccagatgc tggacctatg agactgctgt ggctttggac      1020
     actgagatcc caaatgagct cccatataat gactattttg agtacttcgg accagacttt      1080
     aagctgcaca tcagtccctc aaacatgacc aaccagaata ccaatgagta tctcgagaag      1140
     atcaagcagc gtctctttga gaatctgcgc atgctgcctc atgcccctgg cgtccagatg      1200
     cagccaattc ctgaggatgc tgttcaggaa gacagtgggg atgaagaaga agaagatcct      1260
     gagaagcgca tttcaatccg caattctgat aagagaatat cctgtgatga agaattctct      1320
     gactctgaag atgaagggga aggagggcgc aaaaatgttg ccaactttaa gaaggccaag      1380
     cgtgtgaaaa cagaggagga aaaggaggag gaggagaaga aggatgagaa agaagaggaa      1440
     aaagcaaaag aggagaaagc cgaacccaag ggggtgaagg aagagacaaa atccacctaa      1500
     gatggctgca gctggacagt acctgtcagt gcatagttat cgtaggttag cttctctggt      1560
     tgcctcccat tccacaggat ttatatttta tatatgtttc tgtatatatt tctatataaa      1620
     tatataaatg acttgagaac tgtaaattat tcctttgctt gcactccgct ggggagca        1678
//
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