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EBI Dbfetch

ID   AF038565; SV 1; linear; genomic DNA; STD; PRO; 4806 BP.
XX
AC   AF038565;
XX
DT   02-JUN-1998 (Rel. 55, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Buchnera aphidicola anthranilate phosphoribosyl transferase (trpD),
DE   phosphoribosyl anthranilate isomerase/idoleglycerol phosphate synthetase
DE   fusion (trpC/F), tryptophan synthase large subunit (trpB), and tryptophan
DE   synthase small subunit (trpA) genes, complete cds.
XX
KW   .
XX
OS   Buchnera aphidicola
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Buchnera.
XX
RN   [1]
RP   1-4806
RX   DOI; 10.1007/s002849900337
RX   PUBMED; 9625791.
RA   Baumann L., Baumann P., Moran N.A.;
RT   "The endosymbiont (Buchnera) of the aphid Diuraphis noxia contains all the
RT   genes of the tryptophan biosynthetic pathway";
RL   Curr. Microbiol. 37(1):58-59(1998).
XX
RN   [2]
RP   1-4806
RA   Baumann L., Baumann P., Moran M.A.;
RT   ;
RL   Submitted (14-DEC-1997) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology, University of California, One Shields Ave, Davis, CA
RL   95616-8665, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4806
FT                   /organism="Buchnera aphidicola"
FT                   /mol_type="genomic DNA"
FT                   /note="endosymbiont of the aphid Diuraphis noxia"
FT                   /db_xref="taxon:9"
FT   CDS             complement(<1..45)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="unknown protein"
FT                   /note="ORFA."
FT                   /db_xref="UniProtKB/TrEMBL:O68425"
FT                   /protein_id="AAC27732.1"
FT                   /translation="MNKLIILLLFFLVSM"
FT   CDS             285..1292
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="trpD"
FT                   /product="anthranilate phosphoribosyl transferase"
FT                   /db_xref="GOA:O68426"
FT                   /db_xref="HSSP:1KHD"
FT                   /db_xref="InterPro:IPR017459"
FT                   /db_xref="UniProtKB/Swiss-Prot:O68426"
FT                   /protein_id="AAC27733.1"
FT                   /translation="MQNILNKIYQSQHLNKEESYRLFKSISSGSITDITLSSILTAMKI
FT                   RGESKEEIIGAILAFSECVKYFPKPNYVFLDIVGTGGDIKNTINISTASAFVAASCGLK
FT                   IVKHCNQGVSSTSGSADLLKRFHINLHASSKEHRKTLDKLNICFLFAPKYHDSFKYSNN
FT                   VRKILKTRTIFNLLGPFLNPAIPPLALIGVYKKDLLYSSIEILKSLKYQRAIVLHGDGT
FT                   DEVTLHNTTHVAELFNGKIFSYELHPKDFGLKIHDKKIFTKTSLEENYYIINQIMKGKG
FT                   DKLNEELIAANVAILFKIFGYEDLKSNTKLALNKIRSGDVYKHIINVANMLKED"
FT   CDS             1295..2656
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="trpC/F"
FT                   /product="phosphoribosyl anthranilate
FT                   isomerase/idoleglycerol phosphate synthetase fusion"
FT                   /db_xref="GOA:O68427"
FT                   /db_xref="HSSP:1JCM"
FT                   /db_xref="InterPro:IPR001240"
FT                   /db_xref="UniProtKB/Swiss-Prot:O68427"
FT                   /protein_id="AAC27734.1"
FT                   /translation="MKETILEKIVKNKYEWIKFRKKKQPLITFKNHINTKTRNFYNSLK
FT                   EKNPVFILECKKKSPSLGIIKKNFNLIDIAKIYNKYASAISVLTDEKYFDGKLEFINIV
FT                   RERVSQPILCKDFFIDPFQIYLARYYNADAILLMLSILDDFQYQKLSKIAKELNMGILT
FT                   EVNNTSELKRAIKLNANIIGINNRNLHDLSINLNRTRILSSLIPKNIIIISESGITKYK
FT                   QIRYLSQFVNGFLIGSHLMSEKQLEIGVRSLILGENKICGLTRSCDIEIAEKYGAVYGG
FT                   LIFAPSSLRKISKNTAKKIIFNNTLRNVGVFQNENIEIVKNIAEELNLYAVQLHGQEDQ
FT                   KYVKKLRQTLSINIQIWKAFSIDSKIPDLNWDHIHKYVLDSQFGGSNKCFNWSILKHQI
FT                   LENVILAGGINSNNCIKASKLNCSGLDLNSGIEVSPGIKDHKKIKSVFQKLRYY"
FT   CDS             2685..3878
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="trpB"
FT                   /product="tryptophan synthase large subunit"
FT                   /db_xref="GOA:O68428"
FT                   /db_xref="HSSP:2WSY"
FT                   /db_xref="InterPro:IPR006654"
FT                   /db_xref="UniProtKB/Swiss-Prot:O68428"
FT                   /protein_id="AAC27735.1"
FT                   /translation="MTLLNPYFGKFGGMYVPQILMPALLELEKNFVEAQKDINFHKTFF
FT                   NLLKNYAGRPTPLTLCNNLTKGTKTRIYLKREDLLHGGAHKTNQVLGQAILAIRMKKNE
FT                   IIAETGAGQHGVATAIACALLNLKCRIYMGIKDIKRQHPNVFRMKLMGAEVIPVKNGSG
FT                   TLKDACNEALRDWSNSYKNSHYMIGTAAGPHPYPTIVREFQKIIGEETKQQILEQETKL
FT                   PNAIIACVGGGSNAIGIFSNFINDKEVSLIGVEPGGKGIKTGQHGAPLKHGRTGIFFGM
FT                   KSHLMQDQEGQIQESWSISAGLDFPSVGPEHAWLNSINRAQYVSITDQEALDTFQLLCK
FT                   KEGIIPALESSHALAYALKLMNLSPKKEQIFVVNLSGRGDKDIFTVHDILKKTGKRI"
FT   CDS             3875..4687
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="trpA"
FT                   /product="tryptophan synthase small subunit"
FT                   /db_xref="GOA:O68429"
FT                   /db_xref="HSSP:2WSY"
FT                   /db_xref="InterPro:IPR002028"
FT                   /db_xref="UniProtKB/Swiss-Prot:O68429"
FT                   /protein_id="AAC27736.1"
FT                   /translation="MNRYENIFDRLSQRKEGCFVPFVVLGDPSLDTSLKIINILIQNGA
FT                   DALELGIPFSDPLADGKTIQKANLRALSQKNNIFQYFKEIKNLRKKHTQIPIGLLIYAN
FT                   LVYNQGLDNFYLKCRKSGVDSVLIADVPIEESEIFYTTANKYKISSIFICPPNADDDLL
FT                   YRISLYAKGYIYVLSRPGVTGIENQNFFVSGDFIKKIKKYNSVPLLQGFGISNSIQVKQ
FT                   AISSGLSGVICGSAIINIIEKYLYEEDIMMTKIQEFVKHLKKSTKLIA"
FT   CDS             4762..>4806
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="unknown protein"
FT                   /note="ORFV."
FT                   /db_xref="UniProtKB/TrEMBL:O68430"
FT                   /protein_id="AAC27737.1"
FT                   /translation="MIITASEIRNDTYHF"
XX
SQ   Sequence 4806 BP; 1922 A; 572 C; 674 G; 1638 T; 0 other;
     catagaaact aagaaaaaca ataataatat tattaattta ttcattgtaa aaattccaaa        60
     agccaagtta tcatatataa taaattatga ctatttttat atattatttt ttagtcttac       120
     aattattttt aaaaaatttt tattttaagt ttttaaaatt taaattgaat tatgtatatc       180
     aatagattat tgttgaaaat aaaaaataat aaatatcaaa atattttata tataaatatt       240
     cattttttgt agaaaaacat ttgaaaaata ttaacaggta aaaaatgcaa aatattttga       300
     ataaaattta tcaatcacaa catttaaata aagaagagag ttatagatta tttaaatcta       360
     tttcttccgg aagcataaca gatataacat tatcctctat attaacagca atgaaaataa       420
     gaggtgaatc aaaagaagaa attattggag caatattagc attttcagaa tgtgtcaaat       480
     attttccaaa gcccaactat gtttttcttg atatagtagg aacaggtgga gacattaaga       540
     atacaatcaa tatttctact gcaagtgctt ttgttgctgc aagttgtggc ttaaaaattg       600
     taaaacattg taatcaagga gtgtctagta catcaggttc tgctgattta ttaaaaagat       660
     ttcacataaa tttacatgca tcttcaaaag aacatcgtaa gactttagat aaattaaata       720
     tatgtttttt atttgcacct aagtatcatg atagttttaa atattctaat aatgtacgta       780
     aaattttaaa aactagaact atttttaatc tattaggacc ttttcttaat cctgcaatac       840
     cacctcttgc tctaattggt gtatataaaa aagatttatt gtactcttca attgaaattt       900
     taaaaagttt aaaatatcaa cgcgctatag ttttacacgg cgatggtacg gatgaagtaa       960
     cattacacaa cactacacat gttgctgaat tatttaatgg taaaattttt tcatatgaac      1020
     tacatcctaa agattttggt ttaaaaatac atgataaaaa aatatttaca aaaacttcgt      1080
     tagaagaaaa ttattatatt attaatcaaa ttatgaaagg gaaaggagat aaattaaatg      1140
     aagaattaat cgcagcaaat gtcgctattt tatttaaaat ctttggttat gaagacttaa      1200
     aatcgaatac gaaattagca ttaaataaaa ttcgtagtgg agatgtatat aaacatataa      1260
     ttaatgttgc taatatgtta aaagaagatt aaagatgaaa gaaacaatac ttgaaaaaat      1320
     tgtaaaaaat aaatatgaat ggattaaatt tagaaaaaaa aaacaaccat taatcacttt      1380
     taaaaatcat attaacacta aaacacgcaa tttttataat tccttaaaag agaaaaatcc      1440
     tgtttttata ttagaatgca aaaaaaaatc tccttcttta ggaattatta aaaaaaattt      1500
     taatttaatt gatatcgcaa aaatttataa taaatatgct tctgccatat cagttcttac      1560
     tgatgaaaaa tattttgatg gaaagctaga gtttattaat atagtaagag aacgtgtatc      1620
     acaaccaatt ttatgtaaag atttttttat tgatcccttt caaatatatt tagcaagata      1680
     ttataatgca gatgctattc tattaatgct atctatttta gatgactttc aatatcaaaa      1740
     actatccaaa atagcaaaag aattaaatat ggggatatta actgaggtaa ataatacttc      1800
     ggaactaaaa agggctatta aattaaatgc gaatatcatt ggaattaata atcgtaattt      1860
     acatgactta tcaattaatt taaatcgcac tcgtatcctt tcttctttaa tacctaaaaa      1920
     tatcataata attagtgaat ctggtatcac aaaatacaag caaataagat atctcagcca      1980
     atttgttaat gggtttttaa ttggatcaca tttgatgtct gaaaaacaat tagagatagg      2040
     cgtacgttct ttaatattag gtgaaaacaa aatttgtgga ttaactagaa gttgtgatat      2100
     agaaatcgcg gaaaaatatg gagctgtata tggaggatta atttttgcac caagttcgct      2160
     tagaaaaatt agtaagaata cagcaaaaaa aataattttc aacaatacat taagaaatgt      2220
     aggtgttttt caaaatgaaa atatagaaat cgttaaaaat attgctgaag aactgaattt      2280
     atatgcagtt caactgcatg gtcaagaaga tcaaaaatat gtaaaaaaac ttagacaaac      2340
     attatctata aatattcaaa tttggaaagc attttcaatt gattctaaga taccagatct      2400
     taattgggat cacatacaca agtatgtact agattctcaa tttggtggaa gtaataaatg      2460
     ttttaattgg tctattttaa aacatcaaat tttagaaaat gtaattttag ctggaggtat      2520
     taattctaat aattgtatta aagcatctaa attaaattgt tcaggattag atttgaattc      2580
     tggcatagaa gtttctccag gtattaaaga tcataaaaaa ataaagtcag tatttcaaaa      2640
     attaagatat tattaatact tttaaaaaac caggaaatca ttatatgact ttattaaatc      2700
     cttattttgg taagtttggt ggcatgtatg ttcctcaaat actaatgcca gctctattag      2760
     aattagaaaa aaattttgtt gaagcacaaa aagatattaa ttttcataaa acgtttttta      2820
     atttactaaa aaattatgca ggaagaccta cgccattaac tttatgtaat aatttaacta      2880
     aaggtacaaa aacacgtatt tatcttaaaa gagaagactt attacatggt ggagctcata      2940
     aaaccaatca agttttagga caagctattt tagcaattag gatgaaaaaa aatgaaatta      3000
     ttgctgaaac tggcgctggt caacatggag tagctactgc tattgcttgc gctttattga      3060
     atttgaaatg tagaatttac atgggaatca aagatatcaa aagacaacat cctaatgttt      3120
     ttcgaatgaa attaatgggt gcagaagtga tacctgtaaa aaatggatct ggtactttaa      3180
     aagatgcgtg taatgaagca ttacgtgatt ggtctaatag ctataaaaat tctcactata      3240
     tgattggtac tgcagcagga ccacatccct atcctactat tgttcgagaa tttcaaaaaa      3300
     ttattggaga agaaactaaa caacaaattt tagaacaaga aacaaaatta ccaaatgcaa      3360
     taatcgcatg tgttggagga ggttctaatg caattggtat tttttcaaat tttattaatg      3420
     ataaagaagt aagtttaatt ggtgttgaac ccggggggaa gggtataaaa acaggtcaac      3480
     atggtgcacc attaaaacat ggtagaactg gtattttttt cggaatgaaa tctcatttaa      3540
     tgcaagatca agaaggtcaa attcaagaat cttggtctat ttctgcagga ttagactttc      3600
     catctgttgg tccagaacat gcttggttaa atagtattaa tcgtgctcaa tatgtatcaa      3660
     ttacagatca agaagcactt gatacatttc aattattatg caaaaaagaa ggtataatac      3720
     cagcattaga atcttctcat gcattagctt atgcattaaa attaatgaat ctgtctccaa      3780
     aaaaagaaca aatttttgtt gtcaatcttt ctggccgtgg tgataaagac atctttacag      3840
     tacacgatat tctaaaaaaa acaggaaaaa gaatatgaat cgatatgaaa atatttttga      3900
     tcgattatct caacgtaaag aaggatgttt tgttcccttt gttgttttag gagatccatc      3960
     tttagataca tcactaaaaa taattaacat tttaatacaa aatggagcag atgcattaga      4020
     attaggtatt ccattttcag atccattagc tgatggtaaa actattcaaa aagcaaattt      4080
     acgagcatta tctcaaaaaa ataatatttt tcaatatttt aaagaaataa aaaatttaag      4140
     aaaaaaacat acacaaatac ccatcggtct tttaatatac gctaatcttg tatataacca      4200
     aggtcttgat aatttttatt tgaaatgtcg taaatctggt gtagattcag tgctaatagc      4260
     agatgtacct attgaagaat cagaaatttt ttatacaacc gctaataaat ataaaattag      4320
     ttctattttt atatgccctc ctaatgcaga tgatgatttg ttatatcgca tttctttata      4380
     tgcaaaagga tatatttatg tattatctcg acctggagta acagggatag aaaatcaaaa      4440
     tttttttgta tctggtgatt ttataaaaaa aataaaaaaa tataattctg tacctttatt      4500
     gcaaggtttt ggcatctcta attctattca agtaaaacaa gccatatcat caggtctttc      4560
     cggtgtaata tgcggttccg caataataaa tattattgag aaatatttgt atgaagaaga      4620
     catcatgatg actaaaatac aagaatttgt gaaacattta aaaaaatcta caaaattaat      4680
     agcataaata ttttgatata aaaaatattt tattttttaa taatgtttca actatacatt      4740
     atatatttat aaggagtata catgattatt acggctagtg aaatacgtaa tgatacatat      4800
     catttt                                                                 4806
//


  
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