EBI Dbfetch

ID   AF037983; SV 1; linear; genomic DNA; STD; PRO; 1833 BP.
XX
AC   AF037983;
XX
DT   06-OCT-1998 (Rel. 57, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Pseudomonas syringae hrp type III secreted protein (hrpW) gene, complete
DE   cds.
XX
KW   .
XX
OS   Pseudomonas syringae
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-1833
RX   PUBMED; 9748456.
RA   Charkowski A.O., Alfano J.R., Preston G., Yuan J., He S.Y., Collmer A.;
RT   "The Pseudomonas syringae pv. tomato HrpW protein has domains similar to
RT   harpins and pectate lyases and can elicit the plant hypersensitive response
RT   and bind to pectate";
RL   J. Bacteriol. 180(19):5211-5217(1998).
XX
RN   [2]
RP   1-1833
RA   Charkowski A.O., Collmer A.;
RT   ;
RL   Submitted (10-DEC-1997) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Cornell University, Plant Science Bldg. Rm 334, Ithaca, NY
RL   14853, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1833
FT                   /organism="Pseudomonas syringae"
FT                   /strain="B728a"
FT                   /mol_type="genomic DNA"
FT                   /note="pathovar syringae"
FT                   /db_xref="taxon:317"
FT   promoter        115..139
FT                   /gene="hrpW"
FT                   /note="hrp box"
FT   CDS             268..1593
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="hrpW"
FT                   /product="hrp type III secreted protein"
FT                   /function="hypersensitive elicitor"
FT                   /function="pectate binding"
FT                   /note="HrpW; harpin"
FT                   /db_xref="GOA:O87327"
FT                   /db_xref="HSSP:1EE6"
FT                   /db_xref="InterPro:IPR004898"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:O87327"
FT                   /protein_id="AAC62530.1"
FT                   /translation="MSIGINSSTSYQPASTQLDFSALSGKSPQTNTFSDESTAQGVDPS
FT                   ALLFDTARQKDVSFGQPDNTVQNPTDSSAATDPQSNVVKLLSALVTSLLQMLMNLNKKQ
FT                   DTGQDSNEWQDPFQNEGGLGTPSAEGSDGGTQEASGGDEGGGTTAATGGDGGGGTSPTT
FT                   EGDGGGTSPTAEGDGGGSYVSTGADGSGAPSTEDGTGGGGGSDGVTPQVTPQLANPGRN
FT                   SGNGTVSDTTGSLEQSGEVNVVKDTIKVGAGQVFDGHGATFTADKSMGTGDQDEHQKPL
FT                   FELAEGAVLKNVNLGENEADGIHVNAKNSEQVTIDNVHAQNVGEDMITVKGEGGAKVTN
FT                   LNITNSSANGADDKVIQLNADTHLKVDGFKATDFGTLVRTNGGKQFDDMSVELNGVDAT
FT                   HGKFALVKSDSDDLKLATGDIAMTDVKHAYDKTKASTQHTEL"
FT   terminator      1615..1654
FT                   /gene="hrpW"
XX
SQ   Sequence 1833 BP; 448 A; 555 C; 529 G; 301 T; 0 other;
     tttttttgct ggcgtgtacg cactgagtcg gagggcaagg ggttttggtt ccttggggcg        60
     aggtgactct ccagagcggt gcatcgggat atcgtccgtc aacgcacaca aacgggaacc       120
     catccccccg tgttgccact cacttccggc aacgccaagg cagagtcctc atcgacctat       180
     agaacccgac aaggacgcgg cgagcaacgc cggtaaatcc ggaagacgac gctggttcat       240
     atgtccatcc catcgaggta aagcaccatg agcatcggta tcaactcatc cacctcctac       300
     caacccgctt caacccagct ggacttctcg gcgctgagcg gcaagagtcc gcagaccaat       360
     acgttcagcg atgagagcac tgcacagggc gtcgacccga gtgccctgct gttcgacact       420
     gccagacaga aagacgtcag cttcggacag cccgacaata cggttcaaaa ccccaccgac       480
     agcagcgctg caactgaccc tcaatccaac gtcgtcaagc tgctcagtgc actcgtcaca       540
     tcgctgctgc aaatgctcat gaacctcaat aaaaaacagg acacgggtca ggactccaac       600
     gagtggcaag acccgtttca aaacgaggga ggactcggta cgccatcggc cgaaggcagt       660
     gacggtggta ctcaggaggc ttcaggcggt gacgagggcg gcggtacaac ggcggcgacg       720
     ggtggtgacg gtggtggcgg tacatccccg accactgaag gtgacggcgg cggtacatct       780
     ccaaccgctg aaggtgacgg cggcggtagt tatgtgtcga ctggcgcaga cggcagcggc       840
     gcgccttcga ccgaggacgg aaccggcgga ggcggtggca gtgatggcgt gacgcctcaa       900
     gtcaccccgc aactggccaa tcccggccgc aactcgggca acggcacggt ttcggataca       960
     acgggctctc ttgagcaatc cggcgaagtc aatgtcgtga aagacaccat caaagtcggt      1020
     gctggccagg tgtttgacgg ccacggtgca acctttaccg ccgacaagtc gatgggcacc      1080
     ggcgaccagg acgaacatca gaagcccctg ttcgaactgg ccgaaggcgc tgtgctgaaa      1140
     aacgtgaacc tgggcgagaa cgaagccgac ggcatccacg tgaatgccaa aaactcggag      1200
     caagtcacca ttgataacgt gcacgcccag aacgtcggtg aagacatgat cacggtcaag      1260
     ggcgaaggcg gcgcaaaggt caccaacctg aacatcacta acagcagcgc caacggtgcc      1320
     gatgacaagg tcattcagct caatgccgat acccacctga aagtcgacgg tttcaaggcc      1380
     accgatttcg gtacgctggt ccgcaccaat ggtggcaagc agtttgatga catgagtgtc      1440
     gagctcaatg gcgtggacgc gacccatggc aagttcgcac tcgtcaaaag cgacagtgac      1500
     gatctgaaac tggccactgg cgacatcgcc atgaccgacg tcaagcacgc ctatgacaag      1560
     accaaggcgt ctacccagca caccgagctc tgatacgacg catacatgag aaacaagcaa      1620
     aggggcgcac tccgtggaag gcgccccttt gctttaccgg ctatgggtcg aaacgcttat      1680
     gagcgccctg gctggaacgg caccgcgttc ggtgaacccg ctgcaatgcc accctcttcg      1740
     atgtccggct cacgagcatt gcgacgacgt aatgtgtcaa gcaaggatgc ccccgtcgca      1800
     gcaatcgcct caccactcgc gtcaatgccc gcc                                   1833
//