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EBI DbfetchID AF036924; SV 1; linear; genomic DNA; STD; PRO; 5437 BP. XX AC AF036924; XX DT 13-JAN-1998 (Rel. 54, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Caldicellulosiruptor sp. Rt69B.1 family 10 xylanase (xynC) gene, complete DE cds. XX KW . XX OS Caldicellulosiruptor sp. Rt69B.1 OC Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; OC Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor. XX RN [1] RP 1-5437 RX DOI; 10.1007/s007920050105 RX PUBMED; 10356996. RA Morris D.D., Gibbs M.D., Ford M., Thomas J., Bergquist P.L.; RT "Family 10 and 11 xylanase genes from Caldicellulosiruptor sp. strain RT Rt69B.1"; RL Extremophiles 3(2):103-111(1999). XX RN [2] RP 1-5437 RA Morris D.D., Gibbs M.D., Ford M., Thomas J., Bergquist P.L.; RT ; RL Submitted (05-DEC-1997) to the EMBL/GenBank/DDBJ databases. RL SBS, University of Auckland, 3A Symonds Street, Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1..5437 FT /organism="Caldicellulosiruptor sp. Rt69B.1" FT /strain="Rt69B.1" FT /mol_type="genomic DNA" FT /db_xref="taxon:70295" FT CDS 65..5404 FT /codon_start=1 FT /transl_table=11 FT /gene="xynC" FT /product="family 10 xylanase" FT /EC_number="3.2.1.8" FT /note="XynC" FT /db_xref="GOA:O52374" FT /db_xref="HSSP:1NBC" FT /db_xref="InterPro:IPR001000" FT /db_xref="InterPro:IPR001956" FT /db_xref="InterPro:IPR003305" FT /db_xref="InterPro:IPR005084" FT /db_xref="InterPro:IPR006584" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR008965" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:O52374" FT /protein_id="AAB95326.1" FT /translation="MKKRVISILSLLFFLINTLVGTLIFHQEAKAAAYTVDFEGTDTLS FT FFAYGKSNIAVDMGNAYNGKSSIRVSNRSSIWDGVAVDVKNIMNNGTTWVVSAYVKHSY FT QKPVAFGISAVYDDGSGVKSTLIGEVVAIPNYWKKIVGKWTPNISNVRNLLIVVHTIVE FT SGVDYNVDYIQIMDDNSYLSNAVTFSSGFESGTTEGWQARGSGVTVKPDSVVAYNGKYS FT LYVSGRTSNWHGAQIPVDTILEQGKVYKISVWVYQNSGSTQKMSLTMQRRFATDPSTSY FT ENLIYNRDVPSNTWVEPSGSYSIPAGVTVSELLLYVEAQNANLAFWVDDLKIYDLSKLA FT EPEWEIPSLIEKYKDYFKVGVALSYKSIASDTEKKMVLKHFNSITAGNEMKPSELLISE FT NNYNFSKADEFVNFATSNNIAIRGHTLVWHEQTPDWFFKDANGNTLSKDALLSRLKQYI FT YTVVGRYKGKVYAWDVVNEAIDESQGNGFRRSNWYNICGPEYIEKAFIWAHEADPDAKL FT FYNDYNTENSQKRQFIYNMIKSLKEKGVPIHGIGLQCHINLDWPSISEIENTIKLFSSI FT PGLEIHITELDMSFYQWGSSTSYSTPPRDLLIKQAMRYKELFDLFKKYNVITNVTFWGL FT KDDYSWLSQNFGKSDYPLLFDGNYKSKYAFWSLIEPTVVPVNSTLPAPPAIQVPTPTST FT PTPTPTPTVSATPTPAPTASPAGGSYWTPSESYGALKVWYANGNMSSTTNVLNPKIKIE FT NVGTTAVDLSRVKVRYWYTIDGEAAQSVSVASSINPAYIDVRVVKLGANAGGADYYVEV FT GFKSGAGVLAAGQSTKEIRLSIQKSSGSYNQSNDYSVRSANSYIENEKVTGYIDDVLVW FT GREPGRNAQIKVWYANGNLSSPTNVLNPKIKIENVGTTAVDLSRVKVRYWYTIDGEATQ FT SVSVASSINPAYIDVRVVKLGANAGGADYYVEVGFKSGAGVLAAGQSTKEIRLSIQKSS FT GSYNQSNDYSVRSANSYIENEKVTGYIDDVLVWGKEPSRGTKPAGEVTPAPTPTSTPTP FT TPTTTPAPTSAPTPSPTVTATPTPTPTPTATPTPTPTTTPTPTPTPTVTVTPTPTPTGT FT PGTGSGLKVLYKNNETSASTGSIRPWFKIVNGGSSSVDLSRVKIRYWYTVDGDKPQSAV FT CDWAQIGASNVTFNFVKLTSGVSGADYYLEVGFSSGAGQLQPGKDTGDIQVRFNKNDWS FT NYNQADDWSWMQSMTNYGENAKVTLYVDGVLVWGQEPGGATPAPTSTATPTPTPTATVT FT PTPTATPTPTPTPTATTTPIPTPTTPPTKPVGKIPPNNNPLISHKFGADPAVLVYGGRV FT YMYLTNDILEYDENGNVKDNSYSKINKITVISSDDLVNWTDHGEIEVAGPNGVAKWANF FT SWAPAVAYKKINGKDRFFLYFGNSGGGIGVITADSPTGPWSDPLGRPLITWSTPGVQGV FT VWLFDPAVLVDDDGKAYIYFGGGVPQGQDAMPNTARVLQPGDDMISVVGSAATIPAPYM FT FEDSGINKIGNTYYYSYCTNFAQRPQGSPPAGAIAYMTGKSPVGPWEYRGVILRNPGNF FT FGVGGNNHHQLFEFNGKWYIAYHAQTLAKDLGVAKGYRSPHINQVQIENGVIKEVTADY FT KGVAQVKNFDPYRMVEAETFAWCAGISTKKANASNNMCLTGIDSGDWIALSRVDFGNAG FT PQKFEAQVSNINGKGYIELRIDSVDGRTIAVAEVLPQSGSSSQWVKVEANVENVTGVHD FT LYLVFRGEKKSNLFDMDCWRFVR" XX SQ Sequence 5437 BP; 1731 A; 963 C; 1456 G; 1286 T; 1 other; aagaatgagt atagagtaat aaggtaatat tttgaaatag tagtcaaaaa ggggagtcag 60 taagatgaag aagagggtaa tttcaattct ttctttattg ttttttttaa taaacacgct 120 tgtaggtact ttgatatttc atcaagaagc aaaagcagca gcatatactg tggattttga 180 aggcactgat actctatctt tctttgcata tggaaaatca aacattgcag ttgacatggg 240 caatgcatat aatggtaaaa gcagtatcag ggtgtcaaat agaagttcaa tatgggatgg 300 agttgcagtt gatgttaaaa acattatgaa caatggaacc acatgggtag tttcagcgta 360 tgtaaagcat agctaccaga agccggttgc atttggtatc tcagcggttt atgacgatgg 420 aagtggggtt aagagtactc ttataggtga ggttgtggct attccaaatt attggaagaa 480 aattgttggt aaatggactc caaatattag caatgtcagg aatttgttaa ttgtagtaca 540 cacaattgta gaaagtggag tagattataa tgttgactat atccaaataa tggatgacaa 600 tagttaccta tcaaatgcgg tgacattttc aagtggattt gaaagtggta ccactgaagg 660 atggcaggca aggggaagcg gtgttacagt aaaaccagat agcgttgtgg catataatgg 720 caagtatagt ttgtacgtca gtgggagaac gtcaaattgg catggtgcac agattccggt 780 ggatacaatt ttggaacagg gtaaagtata taaaataagt gtttgggttt atcagaacag 840 tggttcaact caaaaaatgt cattaactat gcaaaggaga tttgctacag atccttcaac 900 aagctatgaa aatctgatat ataacaggga tgtaccgagt aatacgtggg ttgagccgag 960 tggaagctac tcaattcctg ctggtgttac agttagcgag ttattacttt atgttgaggc 1020 gcaaaatgca aatttggctt tctgggttga tgatttaaag atttatgatt tatccaagct 1080 ggctgaacct gaatgggaga taccatcttt gatagaaaag tataaagatt atttcaaagt 1140 aggggtagct ttgtcttaca aaagcattgc ttctgataca gagaagaaga tggttttgaa 1200 gcatttcaat agtattactg cagggaatga aatgaaacca tcagagttac ttatcagtga 1260 aaataattat aactttagta aagcagatga atttgtaaat tttgcaacaa gtaacaacat 1320 tgccatcaga ggtcatacac tggtttggca tgagcaaaca cccgactggt ttttcaagga 1380 tgcaaatgga aataccttga gcaaggatgc attgctaagc agattaaagc agtatattta 1440 tacggtagtg ggaagatata aagggaaggt ttatgcatgg gatgtggtaa atgaagcaat 1500 agatgaaagt caaggtaatg gattcaggag atctaactgg tacaacattt gtggtcccga 1560 atatattgaa aaggctttta tatgggcaca tgaagccgat ccagacgcaa aattgtttta 1620 caacgattac aacacagaaa acagtcagaa gagacagttt atttacaaca tgattaagag 1680 tctcaaggaa aaaggtgttc caattcatgg aataggattg cagtgtcata taaatcttga 1740 ttggccctcg attagcgaga tagagaacac cataaaattg ttcagctcta tacctggatt 1800 ggagatacac attacggagc ttgatatgag tttttatcag tggggttcga gtaccagtta 1860 ttcaacgcca ccaagagatc tcctgataaa acaggcaatg agatataagg agttattcga 1920 tttatttaaa aagtacaatg taataactaa tgtaacattc tggggactaa aggatgatta 1980 ctcatggctg agtcaaaact ttggaaaaag tgattacccg ttgttatttg atggaaacta 2040 taagtcaaaa tatgcctttt ggagcctgat tgagccaact gtggtgccgg tcaactcaac 2100 attgccagcg ccgccagcta ttcaagtacc tacaccaaca tccacaccaa cgccgacccc 2160 gacaccaaca gtgagtgcaa cgccaacacc ggcaccgacg gcatcaccgg caggtggcag 2220 ttactggaca ccgagtgaga gttacggtgc gctgaaggta tggtatgcga atggtaatat 2280 gagcagcacg acgaatgtat tgaatccgaa gataaagata gagaatgtag ggacgacggc 2340 ggtagatctt agcagggtta aggtaagata ctggtacacg atagatggag aggcagcaca 2400 gagtgtaagt gtagcgagca gcataaatcc tgcgtatata gatgtgaggg tagtgaagct 2460 tggggcgaat gcaggcggag cggactatta tgtagaggta gggtttaaga gtggagcagg 2520 tgttttggca gcgggtcaga gcacgaagga gataaggcta agcatacaga agagcagcgg 2580 cagctacaat cagtcgaatg actattcggt aaggagtgca aatagctata tagagaacga 2640 gaaggtaacg gggtatatag atgatgtact tgtatgggga agagagccgg gcaggaacgc 2700 ccagatcaag gtatggtatg cgaatgggaa tttaagcagc ccgacgaatg tattgaatcc 2760 gaagataaag atagagaatg tagggacgac ggcggtagat cttagcaggg ttaaggtaag 2820 atactggtac acgatagatg gagaggcgac gcagagtgta agtgtagcaa gcagcataaa 2880 tcctgcgtat atagatgtga gggtagtgaa gcttggggcg aatgcaggcg gagcggacta 2940 ttatgtagag gtaggtttta agagtggagc aggtgttttg gcagcgggtc agagcacgaa 3000 ggagataagg ctaagcatac agaagagcag tggtagctac aatcagtcaa atgactattc 3060 ggtaaggagt gcaaatagct atatagagaa cgagaaggta acagggtata tagatgatgt 3120 acttgtatgg ggcaaagagc cgagcagggg tacaaagccg gcgggtgaag tgacaccggc 3180 accgacgccg acatcaacgc caacaccgac acctacaacc acacctgcac cgacatcagc 3240 cccgacaccg agcccaacag tgacagcaac gccgactcca acgccgacgc cgacggcaac 3300 tccgaccccg actccgacaa ccacacctac gcccacacca acaccgacag tgacggtgac 3360 accgacgccg acaccgacag ggacacctgg cacgggaagt ggtttgaagg tactatacaa 3420 gaacaatgag accagtgcga gcacaggttc tataaggccg tggtttaaga tagtgaatgg 3480 aggcagcagc agtgttgatc ttagcagggt taagataaga tactggtaca cagtggatgg 3540 tgacaagcca cagagtgcgg tatgtgactg ggcacagata ggggcaagca atgtgacatt 3600 caactttgtg aagcttacca gcggagtgag tggagcggat tattacttgg aggtaggatt 3660 tagcagtgga gctgggcagc tgcagcctgg taaggacaca ggggatatac aggtaaggtt 3720 taacaagaat gactggagca attacaatca ggcagacgac tggtcatgga tgcagagcat 3780 gacgaattat ggagagaatg cgaaggtgac gctgtatgta gatggagttc tggtatgggg 3840 gcaggagccg ggcggagcga cacctgcacc gacaagcaca gcaacaccaa cgccaactcc 3900 gacagcaaca gtaacaccga cgccgacagc aactccaacr ccaacgccta caccgacagc 3960 aacaacaacc ccaataccaa cacccacaac gcctcctaca aaaccggtag gtaagattcc 4020 acccaataac aacccgctga tttcacacaa gttcggtgcg gatccggcag tccttgttta 4080 tggtggcaga gtctatatgt atcttacaaa tgacattctg gagtatgatg aaaatggaaa 4140 tgtaaaggat aactcataca gcaaaataaa caaaataaca gttatatcat cggatgacct 4200 tgtaaactgg acagaccatg gcgagattga agttgcaggt ccgaacggag ttgcaaaatg 4260 ggcgaatttt tcatgggcgc cggctgttgc atacaaaaag attaacggaa aagacaggtt 4320 cttcctttac tttggcaaca gcggtggtgg cataggtgta ataacggcag actcaccaac 4380 cggtccgtgg tcagacccgc ttggaagacc gcttatcaca tggtcaacac ccggtgtgca 4440 gggtgttgtc tggttgtttg accctgcagt gctggtggat gatgacggga aagcatatat 4500 ttatttcggt ggaggagttc cacagggaca ggatgctatg ccaaacacgg cacgtgtgct 4560 gcagccgggc gatgatatga taagtgttgt tgggagtgct gctacaattc ctgcaccgta 4620 catgtttgag gattccggga taaacaagat agggaatacc tactattact cctactgcac 4680 aaactttgca cagagaccgc agggcagccc accggcaggt gctatagcgt acatgacagg 4740 caaaagtcca gtgggaccct gggaataccg tggggttata ctcagaaatc ctgggaattt 4800 ctttggagtt ggtggcaata accatcacca gttgtttgaa tttaatggca aatggtatat 4860 tgcataccac gcacagacac ttgcaaagga tttgggagtt gcaaagggtt acaggtcacc 4920 gcatataaac caggtgcaga ttgaaaatgg tgtgataaaa gaagtaacag ccgactacaa 4980 aggagtggca caggtgaaga attttgaccc gtacaggatg gttgaggcag agacatttgc 5040 atggtgtgca gggatttcga caaagaaggc aaatgcgagc aataatatgt gcttgacagg 5100 tatagacagt ggagactgga ttgcactttc cagggttgac tttggtaatg caggtccaca 5160 gaaatttgag gcacaggttt ccaatatcaa cggcaaaggg tatatagagc tcaggataga 5220 ctcggttgat ggtagaacca ttgcagttgc agaggttctg ccacagagtg gttcttcatc 5280 gcagtgggtc aaggtagagg caaatgttga gaatgtaaca ggtgtgcatg atttgtatct 5340 tgtgttcaga ggtgaaaaga agagcaacct gtttgacatg gattgctgga gatttgtgag 5400 gtaaatagca ttagtcaacg cgagatatta atactgc 5437 // |
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